Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0990.Seq
         (732 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.4  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    25   1.8  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   2.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   4.2  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   5.6  
AY146744-1|AAO12104.1|  176|Anopheles gambiae odorant-binding pr...    23   9.7  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 19/62 (30%), Positives = 26/62 (41%), Gaps = 2/62 (3%)
 Frame = +2

Query: 392 PTFGGALSPGRNSTAMPGGAPPSMASRATLFGQRWQQ--LPSVFGEGGDTSTPPLLDLSE 565
           P    A  P       P G PPS  +   L G    +  LP++ G GG  + PP+  L  
Sbjct: 574 PNLPNAQPPPAPPPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGG--AAPPVTILVP 631

Query: 566 FP 571
           +P
Sbjct: 632 YP 633


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = +1

Query: 49  RCIKFTVFYSSVLREDSFMYHLYWCL 126
           R + F + ++S+ R+ SF+ +LY+ L
Sbjct: 799 RTLGFILRFTSIFRDQSFLRNLYYAL 824


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
            differentiation regulator protein.
          Length = 1283

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 16/65 (24%), Positives = 23/65 (35%)
 Frame = +2

Query: 401  GGALSPGRNSTAMPGGAPPSMASRATLFGQRWQQLPSVFGEGGDTSTPPLLDLSEFPSLT 580
            G A S G  +     G+     S A L G R ++ PS+       +TP     +     T
Sbjct: 1129 GNAGSGGGQANQAAAGSDGGAGSPAELSGNRERRSPSIPNSNAGAATPTATTAAPLAPTT 1188

Query: 581  ARGAG 595
                G
Sbjct: 1189 GNSKG 1193


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 453 GAPPGIAVELRPGDKAPPKVG 391
           G PPG  +   PG+  PP+ G
Sbjct: 184 GMPPGPQMMRPPGNVGPPRTG 204


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = +3

Query: 579  QQEARVTKHPLQHHHLRALNPMLVW*SSRH 668
            QQ  +  +H LQHHH   L+      SS H
Sbjct: 1320 QQHQQHQQHQLQHHHQPQLSQSSHHSSSSH 1349


>AY146744-1|AAO12104.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP8 protein.
          Length = 176

 Score = 23.0 bits (47), Expect = 9.7
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -1

Query: 579 VSDGNSLRSRSGGVDVSPPSPKTDGSC 499
           V D + +RS +      PP+P + G C
Sbjct: 132 VEDPDDIRSETSRCLREPPAPDSGGGC 158


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 737,708
Number of Sequences: 2352
Number of extensions: 15121
Number of successful extensions: 31
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74844540
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)