Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0990.Seq
(732 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011826-1|AAH11826.1| 540|Homo sapiens CCR4-NOT transcription ... 56 1e-07
BC002597-1|AAH02597.1| 540|Homo sapiens CCR4-NOT transcription ... 56 1e-07
AF180473-1|AAF29827.1| 540|Homo sapiens Not2p protein. 56 1e-07
AF044215-1|AAQ13426.1| 378|Homo sapiens unknown protein. 56 1e-07
Z25535-1|CAA80982.1| 1475|Homo sapiens nuclear pore complex prot... 33 1.1
BC052965-1|AAH52965.1| 1475|Homo sapiens nucleoporin 153kDa prot... 33 1.1
AL157776-1|CAI16393.1| 1475|Homo sapiens nucleoporin 153kDa prot... 33 1.1
AL138824-2|CAI12246.1| 1475|Homo sapiens nucleoporin 153kDa prot... 33 1.1
AL138724-1|CAI40945.1| 1475|Homo sapiens nucleoporin 153kDa prot... 33 1.1
AB210024-1|BAE06106.1| 1455|Homo sapiens NUP153 variant protein ... 33 1.1
BC113447-1|AAI13448.1| 861|Homo sapiens hypothetical protein FL... 31 5.6
BC113445-1|AAI13446.1| 861|Homo sapiens hypothetical protein FL... 31 5.6
AK095696-1|BAC04612.1| 861|Homo sapiens protein ( Homo sapiens ... 31 5.6
AC010984-1|AAY24355.1| 861|Homo sapiens unknown protein. 31 5.6
AY987042-1|AAY26403.1| 706|Homo sapiens regulator of G-protein ... 30 7.4
AL645949-3|CAM17752.1| 1376|Homo sapiens regulator of G-protein ... 30 7.4
AL645949-2|CAM17751.1| 1447|Homo sapiens regulator of G-protein ... 30 7.4
AL645949-1|CAM17750.1| 799|Homo sapiens regulator of G-protein ... 30 7.4
AL590235-4|CAM21454.1| 1376|Homo sapiens regulator of G-protein ... 30 7.4
AL590235-3|CAM21453.1| 1447|Homo sapiens regulator of G-protein ... 30 7.4
AL590235-2|CAM21452.1| 799|Homo sapiens regulator of G-protein ... 30 7.4
AF035152-1|AAC39835.1| 1376|Homo sapiens RGS12 protein. 30 7.4
AF030152-1|AAB96645.1| 1447|Homo sapiens regulator of G protein ... 30 7.4
AF030149-2|AAB96646.1| 788|Homo sapiens regulator of G protein ... 30 7.4
AF030149-1|AAB96644.1| 799|Homo sapiens regulator of G protein ... 30 7.4
AF030112-1|AAB84187.1| 646|Homo sapiens regulator of G protein ... 30 7.4
AF030111-1|AAB84114.1| 1447|Homo sapiens regulator of G protein ... 30 7.4
AF030110-1|AAB84007.1| 789|Homo sapiens regulator of G protein ... 30 7.4
AF030109-1|AAB84186.1| 799|Homo sapiens regulator of G protein ... 30 7.4
BC080195-1|AAH80195.1| 881|Homo sapiens Rho GTPase activating p... 30 9.8
AL833975-1|CAD38819.1| 414|Homo sapiens hypothetical protein pr... 30 9.8
AK125358-1|BAC86144.1| 608|Homo sapiens protein ( Homo sapiens ... 30 9.8
>BC011826-1|AAH11826.1| 540|Homo sapiens CCR4-NOT transcription
complex, subunit 2 protein.
Length = 540
Score = 56.0 bits (129), Expect = 1e-07
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Frame = +2
Query: 467 SRATLFGQRWQQLPSVFGEGGDTSTPPLLDLSEFPSLTAR----GAGDQXXXXXXXXXGS 634
+R FG ++F + LDLS+FP+L R G+G+ G
Sbjct: 197 NRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSGNPTPLINPLA-GR 255
Query: 635 KPYVGMVKQPTSEQSE-FTMSSEDFPALPGTS 727
PYVGMV +P +EQS+ F++ +EDFPALPG+S
Sbjct: 256 APYVGMVTKPANEQSQDFSIHNEDFPALPGSS 287
>BC002597-1|AAH02597.1| 540|Homo sapiens CCR4-NOT transcription
complex, subunit 2 protein.
Length = 540
Score = 56.0 bits (129), Expect = 1e-07
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Frame = +2
Query: 467 SRATLFGQRWQQLPSVFGEGGDTSTPPLLDLSEFPSLTAR----GAGDQXXXXXXXXXGS 634
+R FG ++F + LDLS+FP+L R G+G+ G
Sbjct: 197 NRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSGNPTPLINPLA-GR 255
Query: 635 KPYVGMVKQPTSEQSE-FTMSSEDFPALPGTS 727
PYVGMV +P +EQS+ F++ +EDFPALPG+S
Sbjct: 256 APYVGMVTKPANEQSQDFSIHNEDFPALPGSS 287
>AF180473-1|AAF29827.1| 540|Homo sapiens Not2p protein.
Length = 540
Score = 56.0 bits (129), Expect = 1e-07
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Frame = +2
Query: 467 SRATLFGQRWQQLPSVFGEGGDTSTPPLLDLSEFPSLTAR----GAGDQXXXXXXXXXGS 634
+R FG ++F + LDLS+FP+L R G+G+ G
Sbjct: 197 NRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSGNPTPLINPLA-GR 255
Query: 635 KPYVGMVKQPTSEQSE-FTMSSEDFPALPGTS 727
PYVGMV +P +EQS+ F++ +EDFPALPG+S
Sbjct: 256 APYVGMVTKPANEQSQDFSIHNEDFPALPGSS 287
>AF044215-1|AAQ13426.1| 378|Homo sapiens unknown protein.
Length = 378
Score = 56.0 bits (129), Expect = 1e-07
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Frame = +2
Query: 467 SRATLFGQRWQQLPSVFGEGGDTSTPPLLDLSEFPSLTAR----GAGDQXXXXXXXXXGS 634
+R FG ++F + LDLS+FP+L R G+G+ G
Sbjct: 198 NRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRREGSGNPTPLINPLA-GR 256
Query: 635 KPYVGMVKQPTSEQSE-FTMSSEDFPALPGTS 727
PYVGMV +P +EQS+ F++ +EDFPALPG+S
Sbjct: 257 APYVGMVTKPANEQSQDFSIHNEDFPALPGSS 288
>Z25535-1|CAA80982.1| 1475|Homo sapiens nuclear pore complex protein
hnup153 protein.
Length = 1475
Score = 33.1 bits (72), Expect = 1.1
Identities = 25/69 (36%), Positives = 33/69 (47%)
Frame = +2
Query: 389 TPTFGGALSPGRNSTAMPGGAPPSMASRATLFGQRWQQLPSVFGEGGDTSTPPLLDLSEF 568
TPTFG S G + PG S++S LF Q P FG +S PP+ +
Sbjct: 1324 TPTFGQ--SQGASQPNPPGFG--SISSSTALFPTGSQPAPPTFGTVSSSSQPPV--FGQQ 1377
Query: 569 PSLTARGAG 595
PS +A G+G
Sbjct: 1378 PSQSAFGSG 1386
>BC052965-1|AAH52965.1| 1475|Homo sapiens nucleoporin 153kDa protein.
Length = 1475
Score = 33.1 bits (72), Expect = 1.1
Identities = 25/69 (36%), Positives = 33/69 (47%)
Frame = +2
Query: 389 TPTFGGALSPGRNSTAMPGGAPPSMASRATLFGQRWQQLPSVFGEGGDTSTPPLLDLSEF 568
TPTFG S G + PG S++S LF Q P FG +S PP+ +
Sbjct: 1324 TPTFGQ--SQGASQPNPPGFG--SISSSTALFPTGSQPAPPTFGTVSSSSQPPV--FGQQ 1377
Query: 569 PSLTARGAG 595
PS +A G+G
Sbjct: 1378 PSQSAFGSG 1386
>AL157776-1|CAI16393.1| 1475|Homo sapiens nucleoporin 153kDa protein.
Length = 1475
Score = 33.1 bits (72), Expect = 1.1
Identities = 25/69 (36%), Positives = 33/69 (47%)
Frame = +2
Query: 389 TPTFGGALSPGRNSTAMPGGAPPSMASRATLFGQRWQQLPSVFGEGGDTSTPPLLDLSEF 568
TPTFG S G + PG S++S LF Q P FG +S PP+ +
Sbjct: 1324 TPTFGQ--SQGASQPNPPGFG--SISSSTALFPTGSQPAPPTFGTVSSSSQPPV--FGQQ 1377
Query: 569 PSLTARGAG 595
PS +A G+G
Sbjct: 1378 PSQSAFGSG 1386
>AL138824-2|CAI12246.1| 1475|Homo sapiens nucleoporin 153kDa protein.
Length = 1475
Score = 33.1 bits (72), Expect = 1.1
Identities = 25/69 (36%), Positives = 33/69 (47%)
Frame = +2
Query: 389 TPTFGGALSPGRNSTAMPGGAPPSMASRATLFGQRWQQLPSVFGEGGDTSTPPLLDLSEF 568
TPTFG S G + PG S++S LF Q P FG +S PP+ +
Sbjct: 1324 TPTFGQ--SQGASQPNPPGFG--SISSSTALFPTGSQPAPPTFGTVSSSSQPPV--FGQQ 1377
Query: 569 PSLTARGAG 595
PS +A G+G
Sbjct: 1378 PSQSAFGSG 1386
>AL138724-1|CAI40945.1| 1475|Homo sapiens nucleoporin 153kDa protein.
Length = 1475
Score = 33.1 bits (72), Expect = 1.1
Identities = 25/69 (36%), Positives = 33/69 (47%)
Frame = +2
Query: 389 TPTFGGALSPGRNSTAMPGGAPPSMASRATLFGQRWQQLPSVFGEGGDTSTPPLLDLSEF 568
TPTFG S G + PG S++S LF Q P FG +S PP+ +
Sbjct: 1324 TPTFGQ--SQGASQPNPPGFG--SISSSTALFPTGSQPAPPTFGTVSSSSQPPV--FGQQ 1377
Query: 569 PSLTARGAG 595
PS +A G+G
Sbjct: 1378 PSQSAFGSG 1386
>AB210024-1|BAE06106.1| 1455|Homo sapiens NUP153 variant protein
protein.
Length = 1455
Score = 33.1 bits (72), Expect = 1.1
Identities = 25/69 (36%), Positives = 33/69 (47%)
Frame = +2
Query: 389 TPTFGGALSPGRNSTAMPGGAPPSMASRATLFGQRWQQLPSVFGEGGDTSTPPLLDLSEF 568
TPTFG S G + PG S++S LF Q P FG +S PP+ +
Sbjct: 1304 TPTFGQ--SQGASQPNPPGFG--SISSSTALFPTGSQPAPPTFGTVSSSSQPPV--FGQQ 1357
Query: 569 PSLTARGAG 595
PS +A G+G
Sbjct: 1358 PSQSAFGSG 1366
>BC113447-1|AAI13448.1| 861|Homo sapiens hypothetical protein
FLJ38377 protein.
Length = 861
Score = 30.7 bits (66), Expect = 5.6
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 440 PGGAPPSMASRATLFGQRWQQLPSVFGEGGDTSTPPLLDLSEFP 571
P PP + LFGQRW + P + + +S+P + + P
Sbjct: 692 PAAWPPRQDMGSGLFGQRWARGPDMLEQKQSSSSPSMTTIHGLP 735
>BC113445-1|AAI13446.1| 861|Homo sapiens hypothetical protein
FLJ38377 protein.
Length = 861
Score = 30.7 bits (66), Expect = 5.6
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 440 PGGAPPSMASRATLFGQRWQQLPSVFGEGGDTSTPPLLDLSEFP 571
P PP + LFGQRW + P + + +S+P + + P
Sbjct: 692 PAAWPPRQDMGSGLFGQRWARGPDMLEQKQSSSSPSMTTIHGLP 735
>AK095696-1|BAC04612.1| 861|Homo sapiens protein ( Homo sapiens
cDNA FLJ38377 fis, clone FEBRA2002781. ).
Length = 861
Score = 30.7 bits (66), Expect = 5.6
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 440 PGGAPPSMASRATLFGQRWQQLPSVFGEGGDTSTPPLLDLSEFP 571
P PP + LFGQRW + P + + +S+P + + P
Sbjct: 692 PAAWPPRQDMGSGLFGQRWARGPDMLEQKQSSSSPSMTTIHGLP 735
>AC010984-1|AAY24355.1| 861|Homo sapiens unknown protein.
Length = 861
Score = 30.7 bits (66), Expect = 5.6
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +2
Query: 440 PGGAPPSMASRATLFGQRWQQLPSVFGEGGDTSTPPLLDLSEFP 571
P PP + LFGQRW + P + + +S+P + + P
Sbjct: 692 PAAWPPRQDMGSGLFGQRWARGPDMLEQKQSSSSPSMTTIHGLP 735
>AY987042-1|AAY26403.1| 706|Homo sapiens regulator of G-protein
signalling 12 protein.
Length = 706
Score = 30.3 bits (65), Expect = 7.4
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -1
Query: 594 PAPLAVSDGNSLRSRSGGVDVSPPSPKTDGSCCQR*PNNVALDAIDGGAPPGIAVELRPG 415
P P AV+ G S RS +G S P Q ++ + +PPG PG
Sbjct: 567 PTPAAVAKGFSKRSATGNGRESASQPGEQWEPVQESSDSPSTSPGSASSPPGPPGTTPPG 626
Query: 414 DKAP 403
K+P
Sbjct: 627 QKSP 630
>AL645949-3|CAM17752.1| 1376|Homo sapiens regulator of G-protein
signalling 12 protein.
Length = 1376
Score = 30.3 bits (65), Expect = 7.4
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -1
Query: 594 PAPLAVSDGNSLRSRSGGVDVSPPSPKTDGSCCQR*PNNVALDAIDGGAPPGIAVELRPG 415
P P AV+ G S RS +G S P Q ++ + +PPG PG
Sbjct: 1232 PTPAAVAKGFSKRSATGNGRESASQPGEQWEPVQESSDSPSTSPGSASSPPGPPGTTPPG 1291
Query: 414 DKAP 403
K+P
Sbjct: 1292 QKSP 1295
>AL645949-2|CAM17751.1| 1447|Homo sapiens regulator of G-protein
signalling 12 protein.
Length = 1447
Score = 30.3 bits (65), Expect = 7.4
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -1
Query: 594 PAPLAVSDGNSLRSRSGGVDVSPPSPKTDGSCCQR*PNNVALDAIDGGAPPGIAVELRPG 415
P P AV+ G S RS +G S P Q ++ + +PPG PG
Sbjct: 1232 PTPAAVAKGFSKRSATGNGRESASQPGEQWEPVQESSDSPSTSPGSASSPPGPPGTTPPG 1291
Query: 414 DKAP 403
K+P
Sbjct: 1292 QKSP 1295
>AL645949-1|CAM17750.1| 799|Homo sapiens regulator of G-protein
signalling 12 protein.
Length = 799
Score = 30.3 bits (65), Expect = 7.4
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -1
Query: 594 PAPLAVSDGNSLRSRSGGVDVSPPSPKTDGSCCQR*PNNVALDAIDGGAPPGIAVELRPG 415
P P AV+ G S RS +G S P Q ++ + +PPG PG
Sbjct: 584 PTPAAVAKGFSKRSATGNGRESASQPGEQWEPVQESSDSPSTSPGSASSPPGPPGTTPPG 643
Query: 414 DKAP 403
K+P
Sbjct: 644 QKSP 647
>AL590235-4|CAM21454.1| 1376|Homo sapiens regulator of G-protein
signalling 12 protein.
Length = 1376
Score = 30.3 bits (65), Expect = 7.4
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -1
Query: 594 PAPLAVSDGNSLRSRSGGVDVSPPSPKTDGSCCQR*PNNVALDAIDGGAPPGIAVELRPG 415
P P AV+ G S RS +G S P Q ++ + +PPG PG
Sbjct: 1232 PTPAAVAKGFSKRSATGNGRESASQPGEQWEPVQESSDSPSTSPGSASSPPGPPGTTPPG 1291
Query: 414 DKAP 403
K+P
Sbjct: 1292 QKSP 1295
>AL590235-3|CAM21453.1| 1447|Homo sapiens regulator of G-protein
signalling 12 protein.
Length = 1447
Score = 30.3 bits (65), Expect = 7.4
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -1
Query: 594 PAPLAVSDGNSLRSRSGGVDVSPPSPKTDGSCCQR*PNNVALDAIDGGAPPGIAVELRPG 415
P P AV+ G S RS +G S P Q ++ + +PPG PG
Sbjct: 1232 PTPAAVAKGFSKRSATGNGRESASQPGEQWEPVQESSDSPSTSPGSASSPPGPPGTTPPG 1291
Query: 414 DKAP 403
K+P
Sbjct: 1292 QKSP 1295
>AL590235-2|CAM21452.1| 799|Homo sapiens regulator of G-protein
signalling 12 protein.
Length = 799
Score = 30.3 bits (65), Expect = 7.4
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -1
Query: 594 PAPLAVSDGNSLRSRSGGVDVSPPSPKTDGSCCQR*PNNVALDAIDGGAPPGIAVELRPG 415
P P AV+ G S RS +G S P Q ++ + +PPG PG
Sbjct: 584 PTPAAVAKGFSKRSATGNGRESASQPGEQWEPVQESSDSPSTSPGSASSPPGPPGTTPPG 643
Query: 414 DKAP 403
K+P
Sbjct: 644 QKSP 647
>AF035152-1|AAC39835.1| 1376|Homo sapiens RGS12 protein.
Length = 1376
Score = 30.3 bits (65), Expect = 7.4
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -1
Query: 594 PAPLAVSDGNSLRSRSGGVDVSPPSPKTDGSCCQR*PNNVALDAIDGGAPPGIAVELRPG 415
P P AV+ G S RS +G S P Q ++ + +PPG PG
Sbjct: 1232 PTPAAVAKGFSKRSATGNGRESASQPGEQWEPVQESSDSPSTSPGSASSPPGPPGTTPPG 1291
Query: 414 DKAP 403
K+P
Sbjct: 1292 QKSP 1295
>AF030152-1|AAB96645.1| 1447|Homo sapiens regulator of G protein
signaling 12 protein.
Length = 1447
Score = 30.3 bits (65), Expect = 7.4
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -1
Query: 594 PAPLAVSDGNSLRSRSGGVDVSPPSPKTDGSCCQR*PNNVALDAIDGGAPPGIAVELRPG 415
P P AV+ G S RS +G S P Q ++ + +PPG PG
Sbjct: 1232 PTPAAVAKGFSKRSATGNGRESASQPGEQWEPVQESSDSPSTSPGSASSPPGPPGTTPPG 1291
Query: 414 DKAP 403
K+P
Sbjct: 1292 QKSP 1295
>AF030149-2|AAB96646.1| 788|Homo sapiens regulator of G protein
signaling 12 protein.
Length = 788
Score = 30.3 bits (65), Expect = 7.4
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -1
Query: 594 PAPLAVSDGNSLRSRSGGVDVSPPSPKTDGSCCQR*PNNVALDAIDGGAPPGIAVELRPG 415
P P AV+ G S RS +G S P Q ++ + +PPG PG
Sbjct: 573 PTPAAVAKGFSKRSATGNGRESASQPGEQWEPVQESSDSPSTSPGSASSPPGPPGTTPPG 632
Query: 414 DKAP 403
K+P
Sbjct: 633 QKSP 636
>AF030149-1|AAB96644.1| 799|Homo sapiens regulator of G protein
signaling 12 protein.
Length = 799
Score = 30.3 bits (65), Expect = 7.4
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -1
Query: 594 PAPLAVSDGNSLRSRSGGVDVSPPSPKTDGSCCQR*PNNVALDAIDGGAPPGIAVELRPG 415
P P AV+ G S RS +G S P Q ++ + +PPG PG
Sbjct: 584 PTPAAVAKGFSKRSATGNGRESASQPGEQWEPVQESSDSPSTSPGSASSPPGPPGTTPPG 643
Query: 414 DKAP 403
K+P
Sbjct: 644 QKSP 647
>AF030112-1|AAB84187.1| 646|Homo sapiens regulator of G protein
signaling RGS12 protein.
Length = 646
Score = 30.3 bits (65), Expect = 7.4
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -1
Query: 594 PAPLAVSDGNSLRSRSGGVDVSPPSPKTDGSCCQR*PNNVALDAIDGGAPPGIAVELRPG 415
P P AV+ G S RS +G S P Q ++ + +PPG PG
Sbjct: 431 PTPAAVAKGFSKRSATGNGRESASQPGEQWEPVQESSDSPSTSPGSASSPPGPPGTTPPG 490
Query: 414 DKAP 403
K+P
Sbjct: 491 QKSP 494
>AF030111-1|AAB84114.1| 1447|Homo sapiens regulator of G protein
signaling protein.
Length = 1447
Score = 30.3 bits (65), Expect = 7.4
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -1
Query: 594 PAPLAVSDGNSLRSRSGGVDVSPPSPKTDGSCCQR*PNNVALDAIDGGAPPGIAVELRPG 415
P P AV+ G S RS +G S P Q ++ + +PPG PG
Sbjct: 1232 PTPAAVAKGFSKRSATGNGRESASQPGEQWEPVQESSDSPSTSPGSASSPPGPPGTTPPG 1291
Query: 414 DKAP 403
K+P
Sbjct: 1292 QKSP 1295
>AF030110-1|AAB84007.1| 789|Homo sapiens regulator of G protein
signaling RGS12 protein.
Length = 789
Score = 30.3 bits (65), Expect = 7.4
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -1
Query: 594 PAPLAVSDGNSLRSRSGGVDVSPPSPKTDGSCCQR*PNNVALDAIDGGAPPGIAVELRPG 415
P P AV+ G S RS +G S P Q ++ + +PPG PG
Sbjct: 574 PTPAAVAKGFSKRSATGNGRESASQPGEQWEPVQESSDSPSTSPGSASSPPGPPGTTPPG 633
Query: 414 DKAP 403
K+P
Sbjct: 634 QKSP 637
>AF030109-1|AAB84186.1| 799|Homo sapiens regulator of G protein
signaling 12 protein.
Length = 799
Score = 30.3 bits (65), Expect = 7.4
Identities = 19/64 (29%), Positives = 26/64 (40%)
Frame = -1
Query: 594 PAPLAVSDGNSLRSRSGGVDVSPPSPKTDGSCCQR*PNNVALDAIDGGAPPGIAVELRPG 415
P P AV+ G S RS +G S P Q ++ + +PPG PG
Sbjct: 584 PTPAAVAKGFSKRSATGNGRESASQPGEQWEPVQESSDSPSTSPGSASSPPGPPGTTPPG 643
Query: 414 DKAP 403
K+P
Sbjct: 644 QKSP 647
>BC080195-1|AAH80195.1| 881|Homo sapiens Rho GTPase activating
protein 17 protein.
Length = 881
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 383 HVTPTFGGALSPGRNSTAMPGG-APPSMASRA 475
H++P F L P ST +P G PP +SRA
Sbjct: 518 HISPAFQPPLPPTDGSTVVPAGPEPPPQSSRA 549
>AL833975-1|CAD38819.1| 414|Homo sapiens hypothetical protein
protein.
Length = 414
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 383 HVTPTFGGALSPGRNSTAMPGG-APPSMASRA 475
H++P F L P ST +P G PP +SRA
Sbjct: 51 HISPAFQPPLPPTDGSTVVPAGPEPPPQSSRA 82
>AK125358-1|BAC86144.1| 608|Homo sapiens protein ( Homo sapiens
cDNA FLJ43368 fis, clone NT2RP8000483, moderately
similar to Rattus norvegicus mRNA for Nadrin E2. ).
Length = 608
Score = 29.9 bits (64), Expect = 9.8
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +2
Query: 383 HVTPTFGGALSPGRNSTAMPGG-APPSMASRA 475
H++P F L P ST +P G PP +SRA
Sbjct: 245 HISPAFQPPLPPTDGSTVVPAGPEPPPQSSRA 276
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,254,336
Number of Sequences: 237096
Number of extensions: 2200660
Number of successful extensions: 5338
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 5089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5327
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8679165170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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