Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0987.Seq
         (776 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...   129   2e-32
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...   129   2e-32
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...   118   7e-29
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.7  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    23   3.6  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score =  129 bits (312), Expect = 2e-32
 Identities = 60/71 (84%), Positives = 65/71 (91%)
 Frame = +3

Query: 549 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 728
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKAEKERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 60

Query: 729 FDNRMVNHFVQ 761
           FDNR+V +  Q
Sbjct: 61  FDNRLVEYCTQ 71


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score =  129 bits (312), Expect = 2e-32
 Identities = 60/71 (84%), Positives = 65/71 (91%)
 Frame = +3

Query: 549 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 728
           INEPTAAAIAYGLDKK   ERNVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKAERERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGED 60

Query: 729 FDNRMVNHFVQ 761
           FDNR+V +  Q
Sbjct: 61  FDNRLVEYCTQ 71


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score =  118 bits (283), Expect = 7e-29
 Identities = 51/71 (71%), Positives = 67/71 (94%)
 Frame = +3

Query: 549 INEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGED 728
           INEPTAAAIAYGLDKKG  E+N+L++DLGGGTFDVSILTI++G+FEV +T+GDTHLGGED
Sbjct: 1   INEPTAAAIAYGLDKKGA-EQNILVYDLGGGTFDVSILTIDNGVFEVVATSGDTHLGGED 59

Query: 729 FDNRMVNHFVQ 761
           FD +++++F++
Sbjct: 60  FDQKVMDYFIK 70


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 322 DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 447
           D  KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 94  LPAREGGDHRQRPGQQDH 147
           +P R+  DHR RP +  H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 196,891
Number of Sequences: 336
Number of extensions: 4494
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)