Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0982.Seq
(711 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit ... 112 4e-26
SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit ... 78 1e-15
SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit... 69 5e-13
SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit... 64 1e-11
SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subuni... 64 1e-11
SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit C... 64 2e-11
SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subu... 61 2e-10
SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit C... 50 3e-07
SPBC3E7.01 |fab1|ste12, SPBC6B1.11c|1-phosphatidylinositol-3-pho... 36 0.004
SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein Hsp60... 33 0.053
SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 28 1.5
SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase Snf21|... 26 4.6
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22... 26 6.1
SPBC16H5.11c |skb1|rmt5|type II protein arginine N-methyltransfe... 26 6.1
SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit Pst... 26 6.1
>SPBC25H2.12c |cct7||chaperonin-containing T-complex eta subunit
Cct7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 558
Score = 112 bits (270), Expect = 4e-26
Identities = 52/77 (67%), Positives = 63/77 (81%)
Frame = +2
Query: 29 QPQILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDG 208
Q +++L+EGTD +QG+ QL+SNINAC V D +RTTLGP G DKL+VD G+ VISNDG
Sbjct: 7 QIPVIVLKEGTDDSQGRGQLLSNINACVAVQDTIRTTLGPLGADKLMVDDRGEVVISNDG 66
Query: 209 ATIMKLLDIIHPAAKIL 259
ATIMKLLDI+HPAAK L
Sbjct: 67 ATIMKLLDIVHPAAKTL 83
Score = 102 bits (245), Expect = 4e-23
Identities = 50/89 (56%), Positives = 65/89 (73%)
Frame = +1
Query: 241 PCR*DLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 420
P LVDIA++QDAEVGDGTTSVV+ AGE+L+ + FVE+GV ++IR R A++LA+
Sbjct: 78 PAAKTLVDIARAQDAEVGDGTTSVVVFAGELLREARTFVEDGVSSHLIIRGYRKAAQLAV 137
Query: 421 EKIKEQAVKIDNKSPEEQRDLLLKCASTA 507
KIKE A+ +D + RDLL KCASTA
Sbjct: 138 NKIKEIAIHLDLSDEGKLRDLLTKCASTA 166
Score = 95.5 bits (227), Expect = 7e-21
Identities = 50/82 (60%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +3
Query: 468 GTKRSPIEVCINSE-SSKLIHQQKDHFSKIVVDAVLSLDTPLLPLDMIGIKKVPGGALED 644
G R + C ++ +SKLI F+K+VVDAVL+LD L +MIGIKKVPGGA+ED
Sbjct: 153 GKLRDLLTKCASTAMNSKLIRSNSTFFTKMVVDAVLTLDQEDLNENMIGIKKVPGGAMED 212
Query: 645 SFLVPGVAFKKTFSYAGFEMQP 710
S LV GVAFKKTFSYAGFE QP
Sbjct: 213 SLLVKGVAFKKTFSYAGFEQQP 234
>SPBC106.06 |cct4||chaperonin-containing T-complex delta subunit
Cct4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 527
Score = 77.8 bits (183), Expect = 1e-15
Identities = 37/67 (55%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
Frame = +2
Query: 65 QTQGKPQLV--SNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDII 238
Q + KPQ V SNI A + V DA+RT+LGP+GMDK+I G+ +++NDGATI+K L ++
Sbjct: 12 QDREKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVL 71
Query: 239 HPAAKIL 259
HPAAK+L
Sbjct: 72 HPAAKML 78
Score = 66.1 bits (154), Expect = 5e-12
Identities = 33/84 (39%), Positives = 55/84 (65%)
Frame = +1
Query: 256 LVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKE 435
LVD++ +QD E GDGTTSVVILAG +L + +++G+HP V+ + + A+ ++ +KE
Sbjct: 78 LVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMKE 137
Query: 436 QAVKIDNKSPEEQRDLLLKCASTA 507
A+ I+ R+ LL+ A+T+
Sbjct: 138 NALAIE----LSDRESLLRAATTS 157
>SPBC1A4.08c |cct3||chaperonin-containing T-complex gamma subunit
Cct3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 528
Score = 69.3 bits (162), Expect = 5e-13
Identities = 34/88 (38%), Positives = 52/88 (59%)
Frame = +1
Query: 241 PCR*DLVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAI 420
P ++++A++QD EVGDGTTSV+ILAGEIL P ++ +HP V+IR+ + A A+
Sbjct: 73 PAAKSMIELARTQDEEVGDGTTSVIILAGEILAAASPLLDRKIHPVVMIRSFKQALEDAL 132
Query: 421 EKIKEQAVKIDNKSPEEQRDLLLKCAST 504
I E + ++ E L+ C T
Sbjct: 133 SIIDEITLPVNVDDNAEMFRLIRTCIGT 160
Score = 64.9 bits (151), Expect = 1e-11
Identities = 28/76 (36%), Positives = 47/76 (61%)
Frame = +2
Query: 26 MQPQILLLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISND 205
MQ + ++ ++ G +SNI A + V D +RT LGPR M K+++D G +++ND
Sbjct: 1 MQSPVFVMNTNGNRQVGHKAQMSNIQAAKAVADVIRTCLGPRAMLKMLLDPVGSVLLTND 60
Query: 206 GATIMKLLDIIHPAAK 253
G I++ +++ HPAAK
Sbjct: 61 GHAILREIEVAHPAAK 76
>SPBC337.05c |cct8||chaperonin-containing T-complex theta subunit
Cct8 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 546
Score = 64.5 bits (150), Expect = 1e-11
Identities = 30/73 (41%), Positives = 50/73 (68%), Gaps = 1/73 (1%)
Frame = +2
Query: 44 LLREGTDQTQG-KPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIM 220
L REG QG + ++ N NA + + + RT+LGP G +K++V+H + ++ND ATI+
Sbjct: 13 LFREGYRIMQGVEDAVIRNCNAIRELSEITRTSLGPNGKNKIVVNHLQQTFLTNDAATII 72
Query: 221 KLLDIIHPAAKIL 259
+ L++IHPAAK++
Sbjct: 73 RELEVIHPAAKLV 85
Score = 38.7 bits (86), Expect = 8e-04
Identities = 24/90 (26%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Frame = +1
Query: 256 LVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKE 435
+VD + Q+ E+GD VV+ GE+L + + + G+ P + + A +E ++E
Sbjct: 85 VVDATQQQENELGDAANFVVVFTGELLAKAENMIRMGLTPLEIAKGYEMALSHTMEVLEE 144
Query: 436 -QAVKIDN-KSPEEQRDLLLKCASTASHRN 519
A KI+ +S +E + C S+ + N
Sbjct: 145 ICADKIETVESEKELIKAIRTCISSKQYGN 174
>SPBC12D12.03 |cct1||chaperonin-containing T-complex alpha subunit
Cct1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 64.5 bits (150), Expect = 1e-11
Identities = 27/66 (40%), Positives = 44/66 (66%)
Frame = +2
Query: 62 DQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDIIH 241
++ G+ N+ A + + V+++LGP G+DK++VD G ++NDGATI+ LLD+ H
Sbjct: 15 EKISGEDVRNQNVLATTAIANVVKSSLGPVGLDKMLVDDIGDVTVTNDGATILSLLDVEH 74
Query: 242 PAAKIL 259
PA K+L
Sbjct: 75 PAGKVL 80
Score = 61.3 bits (142), Expect = 1e-10
Identities = 28/56 (50%), Positives = 39/56 (69%)
Frame = +1
Query: 256 LVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIE 423
LV++A+ QD EVGDGTTSVVI+A E+L+R V+ +HP +I R A R A++
Sbjct: 80 LVELAQQQDKEVGDGTTSVVIIAAELLRRANELVKNKIHPTTIITGYRLAIREAVK 135
Score = 39.9 bits (89), Expect = 4e-04
Identities = 28/77 (36%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Frame = +3
Query: 474 KRSPIEVCINSESSKLIHQQKDHFSKIVVDAVLSLDT------PLLPLDMIGIKKVPGGA 635
K S I V S SSK+I D FS + VDA+LS+ T P+ + I K G +
Sbjct: 150 KESLINVAKTSMSSKIIGNDSDFFSTMAVDAMLSVKTSNSKGETRYPVKAVNILKAHGKS 209
Query: 636 LEDSFLVPGVAFKKTFS 686
+S LV G A T +
Sbjct: 210 SRESVLVKGYALNCTIA 226
>SPAC1D4.04 |cct2||chaperonin-containing T-complex beta subunit
Cct2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 64.1 bits (149), Expect = 2e-11
Identities = 37/84 (44%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = +1
Query: 256 LVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKE 435
LV+I+K QD EVGDGTTSV + A E+L++ + V +HP+V+I R A++ AI+ ++
Sbjct: 80 LVNISKVQDDEVGDGTTSVCVFAAELLRQAEIMVNAKIHPQVIIDGYRIATKTAIDALR- 138
Query: 436 QAVKIDNKS-PEEQRDLLLKCAST 504
A IDN S P + R L A T
Sbjct: 139 -ASSIDNSSDPAKFRSDLENIART 161
Score = 55.2 bits (127), Expect = 9e-09
Identities = 28/73 (38%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Frame = +2
Query: 44 LLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDH-NGKAVISNDGATIM 220
+ E Q +G+ +S+ V D V++TLGP+GMDK++ + +G V++NDGATI+
Sbjct: 8 IFNESGIQERGENARLSSFVGAIAVGDLVKSTLGPKGMDKILQSNSSGDIVVTNDGATIL 67
Query: 221 KLLDIIHPAAKIL 259
K + + + AAK+L
Sbjct: 68 KSIALDNAAAKVL 80
Score = 51.2 bits (117), Expect = 1e-07
Identities = 31/69 (44%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +3
Query: 477 RSPIE-VCINSESSKLIHQQKDHFSKIVVDAVLSLDTPLLPLDMIGIKKVPGGALEDSFL 653
RS +E + + SSK++ Q K+HF+++ VDAVL L LD I I K+ GG L+DSFL
Sbjct: 152 RSDLENIARTTLSSKILSQNKNHFAQLAVDAVLRLKGS-TNLDNIQIIKILGGKLDDSFL 210
Query: 654 VPGVAFKKT 680
G KT
Sbjct: 211 DEGFILNKT 219
>SPAC1420.02c |cct5||chaperonin-containing T-complex epsilon subunit
Cct5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 546
Score = 60.9 bits (141), Expect = 2e-10
Identities = 27/70 (38%), Positives = 47/70 (67%)
Frame = +2
Query: 50 REGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLL 229
+E + G + S+I A + V + VRT+LGPRG+DK+++ +G+ ++NDGATI+ +
Sbjct: 24 QEKKRRLHGIDAVKSHILATKTVANIVRTSLGPRGLDKILISPDGEITVTNDGATILDQM 83
Query: 230 DIIHPAAKIL 259
++ H AK+L
Sbjct: 84 EVEHQIAKLL 93
Score = 58.8 bits (136), Expect = 7e-10
Identities = 28/76 (36%), Positives = 49/76 (64%)
Frame = +1
Query: 256 LVDIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKE 435
LV ++KSQD E+GDGTT VV+LAG +L++ + +++G+HP + A ++A++ +
Sbjct: 93 LVQLSKSQDDEIGDGTTGVVVLAGALLEQAEALIDKGIHPIRIADGYEKACQVAVKHLDA 152
Query: 436 QAVKIDNKSPEEQRDL 483
+ +D SPE +L
Sbjct: 153 ISDVVD-FSPENTTNL 167
Score = 41.5 bits (93), Expect = 1e-04
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Frame = +3
Query: 504 SESSKLIHQQKDHFSKIVVDAVLS---LDTPLLPLDMIGIKKVPGGALEDSFLVPGVAFK 674
S SK++ + DHF+ I VDAVLS L + ++I + GG+++D+ LV GV
Sbjct: 174 SLGSKVVSKAHDHFANIAVDAVLSVADLQRKDVDFELIKVDGKVGGSVDDTKLVKGVVVD 233
Query: 675 KTFSY 689
K S+
Sbjct: 234 KDMSH 238
>SPBC646.11 |cct6||chaperonin-containing T-complex zeta subunit
Cct6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 535
Score = 50.0 bits (114), Expect = 3e-07
Identities = 29/80 (36%), Positives = 45/80 (56%)
Frame = +1
Query: 268 AKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVK 447
A +QD GDGTTSV +L GE+LK+ + ++ EG+HP ++ A A+ + + K
Sbjct: 79 ATAQDDATGDGTTSVCLLVGELLKQAELYIREGLHPSLISDGFNLAKNEALTFL--DSFK 136
Query: 448 IDNKSPEEQRDLLLKCASTA 507
D E R++LL A T+
Sbjct: 137 TDF---EVDREVLLNVAKTS 153
Score = 40.3 bits (90), Expect = 3e-04
Identities = 21/72 (29%), Positives = 36/72 (50%)
Frame = +2
Query: 44 LLREGTDQTQGKPQLVSNINACQLVVDAVRTTLGPRGMDKLIVDHNGKAVISNDGATIMK 223
LL + Q L NI+A + D +++ LGP G K++VD G ++ DG ++
Sbjct: 4 LLNPKAESIQRAQALQVNISAAIGLQDVLKSNLGPTGTTKMLVDGAGAIKLTKDGKVLLT 63
Query: 224 LLDIIHPAAKIL 259
+ I +P A +
Sbjct: 64 EMQIQNPTASCI 75
Score = 30.3 bits (65), Expect = 0.28
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Frame = +3
Query: 486 IEVCINSESSKLIHQQKDHFSKIVVDAVLSLDTPLLPLD--MIGIKKVPGGALEDSFLVP 659
+ V S S+K+ + + + VVDA+L++ P P+D M+ I K+ + D+ L+
Sbjct: 147 LNVAKTSLSTKISSKVVESLAPAVVDAILTIRRPDEPIDLHMVEIMKMQNRSASDTQLIR 206
Query: 660 GV 665
G+
Sbjct: 207 GL 208
>SPBC3E7.01 |fab1|ste12,
SPBC6B1.11c|1-phosphatidylinositol-3-phosphate 5-kinase
Fab1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 1932
Score = 36.3 bits (80), Expect = 0.004
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +3
Query: 606 IGIKKVPGGALEDSFLVPGVAFKKTFS 686
+ IKK+PGG+++D FLV GV F K S
Sbjct: 525 VKIKKIPGGSIQDCFLVNGVLFSKKAS 551
>SPAC12G12.04 |hsp60|hsp60|mitochondrial heat shock protein
Hsp60|Schizosaccharomyces pombe|chr 1|||Manual
Length = 582
Score = 32.7 bits (71), Expect = 0.053
Identities = 24/84 (28%), Positives = 37/84 (44%)
Frame = +1
Query: 262 DIAKSQDAEVGDGTTSVVILAGEILKRLKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQA 441
D+A + GDGTT+ +L I V G +P L R ++ A +E + QA
Sbjct: 107 DVASKTNEVAGDGTTTATVLTRAIFSETVRNVAAGCNPMDLRRGIQLAVDNVVEFL--QA 164
Query: 442 VKIDNKSPEEQRDLLLKCASTASH 513
K D + EE + A+ +H
Sbjct: 165 NKRDITTSEEISQVATISANGDTH 188
Score = 30.3 bits (65), Expect = 0.28
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 125 AVRTTLGPRGMDKLIVDHNGKAVISNDGATIMKLLDI 235
AV TLGP+G + LI G I+ DG T+ + + +
Sbjct: 57 AVSVTLGPKGRNVLIDQPFGSPKITKDGVTVARSVSL 93
>SPAC30C2.07 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 27.9 bits (59), Expect = 1.5
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -2
Query: 620 LFDSNHVERQKWSVQRQDSINNNLREVV 537
LFDSNHV+ QK +DS N L +++
Sbjct: 56 LFDSNHVDGQKGDSVLRDSANAPLTDLM 83
>SPAC1250.01 |snf21|SPAC29A4.21|ATP-dependent DNA helicase
Snf21|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1199
Score = 26.2 bits (55), Expect = 4.6
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 358 EEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 492
E+ V +L RA +L I+ QA K DNKS E+R+ L+
Sbjct: 863 EKSVEENILARA---QYKLDIDGKVIQAGKFDNKSTPEEREAFLR 904
>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
Snf22|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1680
Score = 25.8 bits (54), Expect = 6.1
Identities = 16/50 (32%), Positives = 26/50 (52%)
Frame = +1
Query: 343 LKPFVEEGVHPRVLIRAVRTASRLAIEKIKEQAVKIDNKSPEEQRDLLLK 492
L+ E+ + +L RA +L ++ QA K DNKS E+R+ L+
Sbjct: 1309 LRLITEKSIEENILSRA---QYKLDLDGKVIQAGKFDNKSTPEEREAFLR 1355
>SPBC16H5.11c |skb1|rmt5|type II protein arginine
N-methyltransferase Skb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 645
Score = 25.8 bits (54), Expect = 6.1
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -2
Query: 587 WSVQRQDSINNNLREVVLLLMNQFR*LAVDAHFNRRSLCS 468
WS R + N ++LMN F LA D F +SL S
Sbjct: 469 WSEARNMNDPNAFERQYVVLMNSFDFLAADDEFRFQSLWS 508
>SPAC23C11.15 |pst2||Clr6 histone deacetylase complex subunit
Pst2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1075
Score = 25.8 bits (54), Expect = 6.1
Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -2
Query: 695 ASVTESFL-ESHTRYQERVFKSSTGNLFDSNHVERQKWSVQRQDSINNNLREV 540
AS F+ + T Y+E + K H+E W+++ I N + E+
Sbjct: 375 ASEESGFIVQRKTPYEEAMTKLEEERYEFDRHIEATSWTIKSLKKIQNRINEL 427
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,007,839
Number of Sequences: 5004
Number of extensions: 62040
Number of successful extensions: 203
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 201
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 331187010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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