Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0981X.Seq
(673 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC111487-1|AAI11488.1| 882|Homo sapiens TTC7A protein protein. 32 1.6
AP001725-2|BAA95548.1| 2298|Homo sapiens C21orf5 protein. 32 2.1
AP000692-1|BAA89431.1| 2298|Homo sapiens C21orf5 protein. 32 2.1
AB023150-1|BAA76777.2| 2147|Homo sapiens KIAA0933 protein protein. 32 2.1
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 30 6.6
DQ232883-1|ABB18376.1| 500|Homo sapiens tripartite motif protei... 30 8.7
BC047945-1|AAH47945.1| 500|Homo sapiens tripartite motif-contai... 30 8.7
BC033314-1|AAH33314.1| 341|Homo sapiens tripartite motif-contai... 30 8.7
BC024199-1|AAH24199.1| 503|Homo sapiens TRIM69 protein protein. 30 8.7
AF302089-1|AAL55811.1| 279|Homo sapiens TRIMLESS beta protein. 30 8.7
AF302088-1|AAL55810.1| 296|Homo sapiens TRIMLESS alpha protein. 30 8.7
>BC111487-1|AAI11488.1| 882|Homo sapiens TTC7A protein protein.
Length = 882
Score = 32.3 bits (70), Expect = 1.6
Identities = 21/72 (29%), Positives = 26/72 (36%)
Frame = +3
Query: 21 SVPGGQGPAESTPQQKXAPPAAVRAAHLLLAMCLLSQTSSRNSIQRNTSTPYMNLQTPXS 200
S+PGG G +P P LLLA LL Q N + S P + P
Sbjct: 40 SMPGGGGNRRGSPSAAFTFPDTDDFGKLLLAEALLEQCLKENHAKIKDSMPLLEKNEPKM 99
Query: 201 KKLMQVLQERLN 236
+ L LN
Sbjct: 100 SEAKNYLSSILN 111
>AP001725-2|BAA95548.1| 2298|Homo sapiens C21orf5 protein.
Length = 2298
Score = 31.9 bits (69), Expect = 2.1
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -2
Query: 639 PETRANYLPPTSETGSSARASSCRTPT*SLNYRSSPNQSLSEL 511
P+ A+ P +SE SA SSC T + + + SSP+ L EL
Sbjct: 1096 PDRTAHGAPDSSEHTESADTSSCHTDSENTSSFSSPSHDLQEL 1138
>AP000692-1|BAA89431.1| 2298|Homo sapiens C21orf5 protein.
Length = 2298
Score = 31.9 bits (69), Expect = 2.1
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -2
Query: 639 PETRANYLPPTSETGSSARASSCRTPT*SLNYRSSPNQSLSEL 511
P+ A+ P +SE SA SSC T + + + SSP+ L EL
Sbjct: 1096 PDRTAHGAPDSSEHTESADTSSCHTDSENTSSFSSPSHDLQEL 1138
>AB023150-1|BAA76777.2| 2147|Homo sapiens KIAA0933 protein protein.
Length = 2147
Score = 31.9 bits (69), Expect = 2.1
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -2
Query: 639 PETRANYLPPTSETGSSARASSCRTPT*SLNYRSSPNQSLSEL 511
P+ A+ P +SE SA SSC T + + + SSP+ L EL
Sbjct: 945 PDRTAHGAPDSSEHTESADTSSCHTDSENTSSFSSPSHDLQEL 987
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 30.3 bits (65), Expect = 6.6
Identities = 22/86 (25%), Positives = 33/86 (38%)
Frame = +3
Query: 9 AAAQSVPGGQGPAESTPQQKXAPPAAVRAAHLLLAMCLLSQTSSRNSIQRNTSTPYMNLQ 188
A Q+ Q STP PA + S T++ S+ + STP Q
Sbjct: 245 AQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQ 304
Query: 189 TPXSKKLMQVLQERLNMSKPGKWRVP 266
TP S + V +++S P + P
Sbjct: 305 TPSS--AVSVATPTVSVSTPARTATP 328
>DQ232883-1|ABB18376.1| 500|Homo sapiens tripartite motif protein
69 protein.
Length = 500
Score = 29.9 bits (64), Expect = 8.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 582 LSPMTLSPKSVEDNLLLSPAHTNL 653
LSP+TL PK+ NL+LS + T++
Sbjct: 322 LSPLTLDPKTAHPNLVLSKSQTSV 345
>BC047945-1|AAH47945.1| 500|Homo sapiens tripartite
motif-containing 69 protein.
Length = 500
Score = 29.9 bits (64), Expect = 8.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 582 LSPMTLSPKSVEDNLLLSPAHTNL 653
LSP+TL PK+ NL+LS + T++
Sbjct: 322 LSPLTLDPKTAHPNLVLSKSQTSV 345
>BC033314-1|AAH33314.1| 341|Homo sapiens tripartite
motif-containing 69 protein.
Length = 341
Score = 29.9 bits (64), Expect = 8.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 582 LSPMTLSPKSVEDNLLLSPAHTNL 653
LSP+TL PK+ NL+LS + T++
Sbjct: 163 LSPLTLDPKTAHPNLVLSKSQTSV 186
>BC024199-1|AAH24199.1| 503|Homo sapiens TRIM69 protein protein.
Length = 503
Score = 29.9 bits (64), Expect = 8.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 582 LSPMTLSPKSVEDNLLLSPAHTNL 653
LSP+TL PK+ NL+LS + T++
Sbjct: 322 LSPLTLDPKTAHPNLVLSKSQTSV 345
>AF302089-1|AAL55811.1| 279|Homo sapiens TRIMLESS beta protein.
Length = 279
Score = 29.9 bits (64), Expect = 8.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 582 LSPMTLSPKSVEDNLLLSPAHTNL 653
LSP+TL PK+ NL+LS + T++
Sbjct: 101 LSPLTLDPKTAHPNLVLSKSQTSV 124
>AF302088-1|AAL55810.1| 296|Homo sapiens TRIMLESS alpha protein.
Length = 296
Score = 29.9 bits (64), Expect = 8.7
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 582 LSPMTLSPKSVEDNLLLSPAHTNL 653
LSP+TL PK+ NL+LS + T++
Sbjct: 118 LSPLTLDPKTAHPNLVLSKSQTSV 141
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,918,659
Number of Sequences: 237096
Number of extensions: 2186823
Number of successful extensions: 7280
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 6555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7228
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7647512560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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