Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0981X.Seq
         (673 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50796-1|CAA90668.1|  490|Caenorhabditis elegans Hypothetical pr...    29   2.3  
AC024755-7|AAO91688.1|  833|Caenorhabditis elegans Hypothetical ...    29   2.3  
AC024755-6|AAF59639.1|  877|Caenorhabditis elegans Hypothetical ...    29   2.3  
AC006708-12|AAT81173.1|  908|Caenorhabditis elegans Hypothetical...    29   2.3  
AC006708-11|AAF60426.2| 1019|Caenorhabditis elegans Hypothetical...    29   2.3  
Z81528-4|CAB04281.1|  575|Caenorhabditis elegans Hypothetical pr...    28   5.3  
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z70752-2|CAA94757.2|  366|Caenorhabditis elegans Hypothetical pr...    28   6.9  
L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z92806-6|CAE17878.1|  268|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z37139-8|CAA85487.1|  376|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm (myotubu...    27   9.2  

>Z50796-1|CAA90668.1|  490|Caenorhabditis elegans Hypothetical
           protein T05A6.4 protein.
          Length = 490

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
 Frame = -2

Query: 645 CAPETRANYLPPTSETGSSARASSCRTPT*SLNYRSSPNQSLSEL--GFFFAGKFY 484
           C PE   NY   TSET +    S C      L + S  + S+S+L   F F   FY
Sbjct: 38  CEPECTFNYSEVTSETINFLPGSECGIVCGILTFNSRTDLSISQLTKAFEFMTIFY 93


>AC024755-7|AAO91688.1|  833|Caenorhabditis elegans Hypothetical
           protein Y34B4A.4b protein.
          Length = 833

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +2

Query: 251 KVESALKEMKWWGPQQNNWNPVEVL**TSSMTSTGYWHNTLMLIPTHTQK 400
           ++ESA  E+ WW  +QN      ++  T    +  +W  TL +I   TQK
Sbjct: 655 RIESA--ELLWWAQEQNEKKSKNLVNFTEQFNNLSFWVRTL-IITQGTQK 701


>AC024755-6|AAF59639.1|  877|Caenorhabditis elegans Hypothetical
           protein Y34B4A.4a protein.
          Length = 877

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 16/50 (32%), Positives = 25/50 (50%)
 Frame = +2

Query: 251 KVESALKEMKWWGPQQNNWNPVEVL**TSSMTSTGYWHNTLMLIPTHTQK 400
           ++ESA  E+ WW  +QN      ++  T    +  +W  TL +I   TQK
Sbjct: 655 RIESA--ELLWWAQEQNEKKSKNLVNFTEQFNNLSFWVRTL-IITQGTQK 701


>AC006708-12|AAT81173.1|  908|Caenorhabditis elegans Hypothetical
           protein Y110A7A.9b protein.
          Length = 908

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +3

Query: 519 TEIDSVKNDSSAITLECDMKMLSPMTLS 602
           T I S++ DSS + L+ D+  LSP+ LS
Sbjct: 562 TRIQSIRMDSSKLCLDADLCGLSPLVLS 589


>AC006708-11|AAF60426.2| 1019|Caenorhabditis elegans Hypothetical
           protein Y110A7A.9a protein.
          Length = 1019

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = +3

Query: 519 TEIDSVKNDSSAITLECDMKMLSPMTLS 602
           T I S++ DSS + L+ D+  LSP+ LS
Sbjct: 673 TRIQSIRMDSSKLCLDADLCGLSPLVLS 700


>Z81528-4|CAB04281.1|  575|Caenorhabditis elegans Hypothetical
           protein F35E2.5 protein.
          Length = 575

 Score = 28.3 bits (60), Expect = 5.3
 Identities = 17/42 (40%), Positives = 21/42 (50%)
 Frame = +2

Query: 365 NTLMLIPTHTQKTFSKSKRRTTIKATYSTQAVTKIMIASR*N 490
           NT+   P  T  T + +KR TT KAT  T   T  +I  R N
Sbjct: 281 NTVTKPPRRTTTTRTTTKRLTTTKATLKTTTKTLPVIPPRPN 322


>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
           protein F15B9.4 protein.
          Length = 1140

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 17/71 (23%), Positives = 35/71 (49%)
 Frame = +2

Query: 254 VESALKEMKWWGPQQNNWNPVEVL**TSSMTSTGYWHNTLMLIPTHTQKTFSKSKRRTTI 433
           ++S  ++ +  G   +N  P+E+L    S TS   W N + L+ T  +K+       + +
Sbjct: 212 LQSESRDARIMGLHDDNSQPIEILTRILSKTSDQQWENFIGLLET-IEKSTDIGASISGL 270

Query: 434 KATYSTQAVTK 466
           + + S+  +TK
Sbjct: 271 RVSCSSNVLTK 281


>Z70752-2|CAA94757.2|  366|Caenorhabditis elegans Hypothetical
           protein F25B3.5 protein.
          Length = 366

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = +1

Query: 418 EENNDKGDIFYASCDEDNDCVTIELPCEEETQFRQRLIR*RTIVQR 555
           ++NN     F+   D  ++ +  EL CE+ T+   R+ + R +++R
Sbjct: 231 DDNNPNVSPFFKIFDNTDEGIPEELLCEKNTESALRIYQSRVLIKR 276


>L14433-6|AAA27974.2| 2107|Caenorhabditis elegans Hypothetical protein
            C50C3.2 protein.
          Length = 2107

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = +2

Query: 335  SSMTSTGYWHNTLMLIPTHTQKTFSKSKRRTTIKATYSTQAVTKIMIAS 481
            S+  +T Y H+T+  + T+T+ TF K K     K   ST A  K+ + S
Sbjct: 1673 SNFENTAY-HSTMTFVETYTKDTFEKLK-VVCRKLQNSTDAEKKLSLVS 1719


>Z92806-6|CAE17878.1|  268|Caenorhabditis elegans Hypothetical
           protein K10G4.9 protein.
          Length = 268

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 15/46 (32%), Positives = 25/46 (54%)
 Frame = -2

Query: 375 IRVLCQYPVDVMLDVYYSTSTGFQLFCCGPHHFISFRALSTFLVST 238
           IR L +YPV+V ++    ++ G ++        I F ALS F +S+
Sbjct: 140 IRTLMRYPVNVRINCLTQSTYGLRIVLLITLSIIPFGALSYFKLSS 185


>Z37139-8|CAA85487.1|  376|Caenorhabditis elegans Hypothetical
           protein C14B1.4 protein.
          Length = 376

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -2

Query: 642 APETRANYLPPTSETGSSARASSCRTP 562
           AP T  N + P++ TG+ A  +S +TP
Sbjct: 36  APSTSPNSISPSNPTGTPAPGASAQTP 62


>AF098501-10|AAC67405.3| 1744|Caenorhabditis elegans Mtm
            (myotubularin) family protein 5 protein.
          Length = 1744

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
 Frame = -2

Query: 462  VTACVEYVAFIVVL--LFDFEKVFCVCVGMSIRVLCQYPVDVMLDVYYSTSTGFQL 301
            V+  +E    IV L  L++     C+  G SI  +      ++ D YY T  GFQ+
Sbjct: 1259 VSRMIELSNSIVALMNLYNSSVAICLEAGRSITTILSSLSQLLSDPYYRTCDGFQV 1314


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,634,742
Number of Sequences: 27780
Number of extensions: 344764
Number of successful extensions: 1362
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1358
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)