Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0981X.Seq
(673 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 28 0.070
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 26 0.38
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 26 0.38
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 24 1.5
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 23 3.5
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 22 4.6
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 4.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 4.6
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 22 6.1
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 21 8.1
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 28.3 bits (60), Expect = 0.070
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Frame = +1
Query: 319 GAVVDIKHDVDRILAQH------SYAHPYTHAE-DLLEIKEENNDKGDIFYASCDEDNDC 477
G VD++H +D I ++ + YT E D+LE+ N+K FY CDE
Sbjct: 174 GFQVDLRH-IDEIRGKNVVDIGVDLSEFYTSVEWDILEVPAVRNEK---FYTCCDEPYLD 229
Query: 478 VTIELPCEEETQF 516
+T + +T F
Sbjct: 230 ITFNITMRRKTLF 242
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 25.8 bits (54), Expect = 0.38
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 400 DLLEIKEENNDKGDIFYASCDEDNDCVTIELPCEEETQF 516
D+LE+ N+K FY CDE +T + +T F
Sbjct: 211 DILEVPAVRNEK---FYTCCDEPYLDITFNITMRRKTLF 246
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 25.8 bits (54), Expect = 0.38
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +1
Query: 400 DLLEIKEENNDKGDIFYASCDEDNDCVTIELPCEEETQF 516
D+LE+ N+K FY CDE +T + +T F
Sbjct: 211 DILEVPAVRNEK---FYTCCDEPYLDITFNITMRRKTLF 246
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.8 bits (49), Expect = 1.5
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +1
Query: 364 QHSYAHPYTHAEDLLEIKEENNDKGDIFYA 453
+HSY H T LL I ++ GDI Y+
Sbjct: 128 KHSYVHTITVPNKLLRISQD----GDILYS 153
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +3
Query: 510 PVQTEIDSVKNDSSAITLECDMKMLSPMTLSPKSVED 620
P++ E +N+S C++ SP T+ P+++ D
Sbjct: 340 PLEEEEWENENESDYQDAFCNIVSCSPQTVHPETIID 376
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 22.6 bits (46), Expect = 3.5
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -2
Query: 243 STC*VVPAAPASIFWRXESASSCKVSMYSSESNCA 139
S+C AA A++ + S S C + SS S+ A
Sbjct: 154 SSCGPGAAAAAALLSKRRSVSECSLGTASSTSSTA 188
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.2 bits (45), Expect = 4.6
Identities = 14/53 (26%), Positives = 24/53 (45%)
Frame = +2
Query: 242 ETRKVESALKEMKWWGPQQNNWNPVEVL**TSSMTSTGYWHNTLMLIPTHTQK 400
E + V + L + K W + N W P+ L S + + N L L+ + +K
Sbjct: 254 EIKGVPTYLIKWKNWDLKYNTWEPISNLINCSDILEE-FERNRLQLLESFKRK 305
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 4.6
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +3
Query: 3 EVAAAQSVPGGQGPAESTPQQKXAPPAAVRAAHLLLAMCLLS 128
E A +SVP + + PQ+ PP + A L + L++
Sbjct: 985 EGPAGRSVPSAELIVRTEPQRPAGPPINLEARALSSSEILIT 1026
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 4.6
Identities = 12/42 (28%), Positives = 20/42 (47%)
Frame = +3
Query: 3 EVAAAQSVPGGQGPAESTPQQKXAPPAAVRAAHLLLAMCLLS 128
E A +SVP + + PQ+ PP + A L + L++
Sbjct: 981 EGPAGRSVPSAELIVRTEPQRPAGPPINLEARALSSSEILIT 1022
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.8 bits (44), Expect = 6.1
Identities = 6/26 (23%), Positives = 14/26 (53%)
Frame = -2
Query: 465 FVTACVEYVAFIVVLLFDFEKVFCVC 388
+V+ YV+ + ++ F E+ +C
Sbjct: 119 YVSEMSSYVSVLTIVAFSMERYLAIC 144
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 21.4 bits (43), Expect = 8.1
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -3
Query: 260 SPLSWFRHVESFLQHLHQFFGGGSLQVHV 174
+P W R QH+H GS+ +HV
Sbjct: 179 TPHGWMRRNVLNKQHVHFHDYTGSVVIHV 207
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,455
Number of Sequences: 438
Number of extensions: 4365
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20343105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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