Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0975.Seq
(591 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF110377-1|AAD04629.1| 3859|Homo sapiens PCAF-associated factor ... 31 4.0
AF076974-1|AAD09420.1| 3830|Homo sapiens TRRAP protein protein. 31 4.0
AC004893-1|AAC62433.1| 1443|Homo sapiens WUGSC:H_DJ0808A01.1 pro... 31 4.0
AB209489-1|BAD92726.1| 3587|Homo sapiens Transformation/transcri... 31 4.0
M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteogly... 30 5.3
AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteog... 30 5.3
AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteog... 30 5.3
AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteog... 30 5.3
CR533565-1|CAG38596.1| 632|Homo sapiens RACGAP1 protein. 30 7.0
BC032754-1|AAH32754.1| 632|Homo sapiens RACGAP1 protein protein. 30 7.0
AK000733-1|BAA91347.1| 632|Homo sapiens protein ( Homo sapiens ... 30 7.0
AB040911-1|BAA96002.1| 570|Homo sapiens KIAA1478 protein protein. 30 7.0
AB030251-1|BAA90247.1| 632|Homo sapiens GTPase activating prote... 30 7.0
BC068542-1|AAH68542.1| 574|Homo sapiens lysyl oxidase-like 1 pr... 29 9.3
AL834438-1|CAD39098.1| 1097|Homo sapiens hypothetical protein pr... 29 9.3
AL772337-4|CAI23630.2| 1445|Homo sapiens chromosome 9 open readi... 29 9.3
AK125845-1|BAC86315.1| 1445|Homo sapiens protein ( Homo sapiens ... 29 9.3
AK093206-1|BAC04096.1| 586|Homo sapiens protein ( Homo sapiens ... 29 9.3
>AF110377-1|AAD04629.1| 3859|Homo sapiens PCAF-associated factor 400
protein.
Length = 3859
Score = 30.7 bits (66), Expect = 4.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 275 RHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKR 376
RHQ E R +A +W ++FD D N + AV +
Sbjct: 3188 RHQNESKSRKYLAKVLWLLSFDDDKNTLADAVDK 3221
>AF076974-1|AAD09420.1| 3830|Homo sapiens TRRAP protein protein.
Length = 3830
Score = 30.7 bits (66), Expect = 4.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 275 RHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKR 376
RHQ E R +A +W ++FD D N + AV +
Sbjct: 3159 RHQNESKSRKYLAKVLWLLSFDDDKNTLADAVDK 3192
>AC004893-1|AAC62433.1| 1443|Homo sapiens WUGSC:H_DJ0808A01.1 protein.
Length = 1443
Score = 30.7 bits (66), Expect = 4.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 275 RHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKR 376
RHQ E R +A +W ++FD D N + AV +
Sbjct: 908 RHQNESKSRKYLAKVLWLLSFDDDKNTLADAVDK 941
>AB209489-1|BAD92726.1| 3587|Homo sapiens Transformation/transcription
domain-associated protein variant protein.
Length = 3587
Score = 30.7 bits (66), Expect = 4.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 275 RHQGEVLPRSLIASQVWDMNFDSDTNAIDVAVKR 376
RHQ E R +A +W ++FD D N + AV +
Sbjct: 2898 RHQNESKSRKYLAKVLWLLSFDDDKNTLADAVDK 2931
>M85289-1|AAA52700.1| 4391|Homo sapiens heparan sulfate proteoglycan
protein.
Length = 4391
Score = 30.3 bits (65), Expect = 5.3
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 455 APQACNPRRARSELASAQSRCRFCRAAASPPHQ*HWYRCQNSCPIPA 315
AP ARS + S C+ + SPPH +W R ++ P+P+
Sbjct: 1675 APLVVEVHPARSIVPQGGSHSLRCQVSGSPPHYFYWSR-EDGRPVPS 1720
>AL590556-2|CAH71870.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 30.3 bits (65), Expect = 5.3
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 455 APQACNPRRARSELASAQSRCRFCRAAASPPHQ*HWYRCQNSCPIPA 315
AP ARS + S C+ + SPPH +W R ++ P+P+
Sbjct: 1675 APLVVEVHPARSIVPQGGSHSLRCQVSGSPPHYFYWSR-EDGRPVPS 1720
>AL590103-2|CAI12125.1| 4391|Homo sapiens heparan sulfate proteoglycan
2 protein.
Length = 4391
Score = 30.3 bits (65), Expect = 5.3
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 455 APQACNPRRARSELASAQSRCRFCRAAASPPHQ*HWYRCQNSCPIPA 315
AP ARS + S C+ + SPPH +W R ++ P+P+
Sbjct: 1675 APLVVEVHPARSIVPQGGSHSLRCQVSGSPPHYFYWSR-EDGRPVPS 1720
>AL445795-1|CAC18534.1| 4370|Homo sapiens heparan sulfate proteoglycan
perlecan protein.
Length = 4370
Score = 30.3 bits (65), Expect = 5.3
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = -2
Query: 455 APQACNPRRARSELASAQSRCRFCRAAASPPHQ*HWYRCQNSCPIPA 315
AP ARS + S C+ + SPPH +W R ++ P+P+
Sbjct: 1654 APLVVEVHPARSIVPQGGSHSLRCQVSGSPPHYFYWSR-EDGRPVPS 1699
>CR533565-1|CAG38596.1| 632|Homo sapiens RACGAP1 protein.
Length = 632
Score = 29.9 bits (64), Expect = 7.0
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 452 PQACNPRRARSELASAQSRCRFCRAAASPPHQ*HWYRCQNSCPIP 318
P++C P R + +CR CR + P C++ CP+P
Sbjct: 297 PESCVPCGKRIKFGKLSLKCRDCRVVSHP-------ECRDRCPLP 334
>BC032754-1|AAH32754.1| 632|Homo sapiens RACGAP1 protein protein.
Length = 632
Score = 29.9 bits (64), Expect = 7.0
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 452 PQACNPRRARSELASAQSRCRFCRAAASPPHQ*HWYRCQNSCPIP 318
P++C P R + +CR CR + P C++ CP+P
Sbjct: 297 PESCVPCGKRIKFGKLSLKCRDCRVVSHP-------ECRDRCPLP 334
>AK000733-1|BAA91347.1| 632|Homo sapiens protein ( Homo sapiens
cDNA FLJ20726 fis, clone HEP13735. ).
Length = 632
Score = 29.9 bits (64), Expect = 7.0
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 452 PQACNPRRARSELASAQSRCRFCRAAASPPHQ*HWYRCQNSCPIP 318
P++C P R + +CR CR + P C++ CP+P
Sbjct: 297 PESCVPCGKRIKFGKLSLKCRDCRVVSHP-------ECRDRCPLP 334
>AB040911-1|BAA96002.1| 570|Homo sapiens KIAA1478 protein protein.
Length = 570
Score = 29.9 bits (64), Expect = 7.0
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 452 PQACNPRRARSELASAQSRCRFCRAAASPPHQ*HWYRCQNSCPIP 318
P++C P R + +CR CR + P C++ CP+P
Sbjct: 235 PESCVPCGKRIKFGKLSLKCRDCRVVSHP-------ECRDRCPLP 272
>AB030251-1|BAA90247.1| 632|Homo sapiens GTPase activating protein
protein.
Length = 632
Score = 29.9 bits (64), Expect = 7.0
Identities = 13/45 (28%), Positives = 21/45 (46%)
Frame = -2
Query: 452 PQACNPRRARSELASAQSRCRFCRAAASPPHQ*HWYRCQNSCPIP 318
P++C P R + +CR CR + P C++ CP+P
Sbjct: 297 PESCVPCGKRIKFGKLSLKCRDCRVVSHP-------ECRDRCPLP 334
>BC068542-1|AAH68542.1| 574|Homo sapiens lysyl oxidase-like 1
protein.
Length = 574
Score = 29.5 bits (63), Expect = 9.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +2
Query: 110 LARVRTLLQRGATGDXRXSVSGCRFDGRSRQPQSHPQR 223
+AR RT + + GD SVS F RQ S+PQ+
Sbjct: 139 MARARTSVSQQRHGDSASSVSASAFASTYRQQPSYPQQ 176
>AL834438-1|CAD39098.1| 1097|Homo sapiens hypothetical protein
protein.
Length = 1097
Score = 29.5 bits (63), Expect = 9.3
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Frame = -2
Query: 371 SPPHQ*HWYRCQN------SCPIPARR*ASGAALRPDGE--GRTPAEKLFTGQS 234
SP HW++ +N SC P+R ASG L+PDGE GR ++ T Q+
Sbjct: 273 SPELPEHWWQGRNAIHQEQSCGPPSRLQASGDLLQPDGEFPGRPQSQAEDTQQA 326
>AL772337-4|CAI23630.2| 1445|Homo sapiens chromosome 9 open reading
frame 79 protein.
Length = 1445
Score = 29.5 bits (63), Expect = 9.3
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Frame = -2
Query: 371 SPPHQ*HWYRCQN------SCPIPARR*ASGAALRPDGE--GRTPAEKLFTGQS 234
SP HW++ +N SC P+R ASG L+PDGE GR ++ T Q+
Sbjct: 621 SPELPEHWWQGRNAIHQEQSCGPPSRLQASGDLLQPDGEFPGRPQSQAEDTQQA 674
>AK125845-1|BAC86315.1| 1445|Homo sapiens protein ( Homo sapiens
cDNA FLJ43857 fis, clone TESTI4007239. ).
Length = 1445
Score = 29.5 bits (63), Expect = 9.3
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Frame = -2
Query: 371 SPPHQ*HWYRCQN------SCPIPARR*ASGAALRPDGE--GRTPAEKLFTGQS 234
SP HW++ +N SC P+R ASG L+PDGE GR ++ T Q+
Sbjct: 621 SPELPEHWWQGRNAIHQEQSCGPPSRLQASGDLLQPDGEFPGRPQSQAEDTQQA 674
>AK093206-1|BAC04096.1| 586|Homo sapiens protein ( Homo sapiens
cDNA FLJ35887 fis, clone TESTI2009097. ).
Length = 586
Score = 29.5 bits (63), Expect = 9.3
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 8/54 (14%)
Frame = -2
Query: 371 SPPHQ*HWYRCQN------SCPIPARR*ASGAALRPDGE--GRTPAEKLFTGQS 234
SP HW++ +N SC P+R ASG L+PDGE GR ++ T Q+
Sbjct: 273 SPELPEHWWQGRNAIHQEQSCGPPSRLQASGDLLQPDGEFPGRPQSQAEDTQQA 326
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,324,536
Number of Sequences: 237096
Number of extensions: 1732031
Number of successful extensions: 9030
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 8463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9025
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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