Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0975.Seq
         (591 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT030157-1|ABN49296.1|  126|Drosophila melanogaster IP17707p pro...    32   0.51 
AE014296-3596|AAN12186.2| 1326|Drosophila melanogaster CG33291-P...    30   2.7  
X54360-1|CAA38244.1| 1377|Drosophila melanogaster protein ( Dros...    28   8.2  
U66884-1|AAC47752.1| 1397|Drosophila melanogaster cubitus interr...    28   8.2  
BT024198-1|ABC86260.1|  857|Drosophila melanogaster RE55588p pro...    28   8.2  
AJ251802-1|CAB64652.1| 1462|Drosophila melanogaster GRAAL protei...    28   8.2  
AE014135-3|AAF59373.2| 1397|Drosophila melanogaster CG2125-PA pr...    28   8.2  

>BT030157-1|ABN49296.1|  126|Drosophila melanogaster IP17707p
           protein.
          Length = 126

 Score = 32.3 bits (70), Expect = 0.51
 Identities = 20/48 (41%), Positives = 22/48 (45%)
 Frame = -2

Query: 500 GCQRKRALKWLTDHPAPQACNPRRARSELASAQSRCRFCRAAASPPHQ 357
           G QR RA      H  P+     R R  L  AQ  CR  +AA  PPHQ
Sbjct: 45  GAQRARAGG--PAHAEPRLLRRDRPRRLLQEAQGDCRARQAAVGPPHQ 90


>AE014296-3596|AAN12186.2| 1326|Drosophila melanogaster CG33291-PA
           protein.
          Length = 1326

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 15/43 (34%), Positives = 17/43 (39%)
 Frame = -2

Query: 179 GNLKLXFXXHQXPRAAVMCAPAPAVQQKRMASPGSHLPPTPAP 51
           GNL   F  HQ P       P P  Q +      S LPP+  P
Sbjct: 43  GNLPPNFVQHQAPSQVTGLPPVPPPQMQSPHQVQSQLPPSQTP 85


>X54360-1|CAA38244.1| 1377|Drosophila melanogaster protein (
           Drosophila ciD (cubitusinterruptus Dominant) locus mRNA.
           ).
          Length = 1377

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -1

Query: 192 RPSNRQPETXFRXSPVAPRCSNVRTRASSSAKANGFTR*SSAP 64
           RP+     T     P++P CS   ++ S+ A  N FT  S  P
Sbjct: 868 RPNPSCNSTASFYDPISPGCSRRSSQMSNGANCNSFTSTSGLP 910


>U66884-1|AAC47752.1| 1397|Drosophila melanogaster cubitus
           interruptus dominant proteinprotein.
          Length = 1397

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -1

Query: 192 RPSNRQPETXFRXSPVAPRCSNVRTRASSSAKANGFTR*SSAP 64
           RP+     T     P++P CS   ++ S+ A  N FT  S  P
Sbjct: 868 RPNPSCNSTASFYDPISPGCSRRSSQMSNGANCNSFTSTSGLP 910


>BT024198-1|ABC86260.1|  857|Drosophila melanogaster RE55588p
           protein.
          Length = 857

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -1

Query: 192 RPSNRQPETXFRXSPVAPRCSNVRTRASSSAKANGFTR*SSAP 64
           RP+     T     P++P CS   ++ S+ A  N FT  S  P
Sbjct: 328 RPNPSCNSTASFYDPISPGCSRRSSQMSNGANCNSFTSTSGLP 370


>AJ251802-1|CAB64652.1| 1462|Drosophila melanogaster GRAAL protein
           protein.
          Length = 1462

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 17/50 (34%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
 Frame = +2

Query: 203 PQSHPQRHAHHFDQ*RVSLLEFFLRHQG--EVLPRSLIASQVWDMNFDSD 346
           P S P +H HH         +F LRH G     P      Q  D+N D D
Sbjct: 788 PNSSPHQHQHHHRHPHEHSADFHLRHPGLPNPFPLKNETPQHQDLNDDWD 837


>AE014135-3|AAF59373.2| 1397|Drosophila melanogaster CG2125-PA
           protein.
          Length = 1397

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -1

Query: 192 RPSNRQPETXFRXSPVAPRCSNVRTRASSSAKANGFTR*SSAP 64
           RP+     T     P++P CS   ++ S+ A  N FT  S  P
Sbjct: 868 RPNPSCNSTASFYDPISPGCSRRSSQMSNGANCNSFTSTSGLP 910


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,183,691
Number of Sequences: 53049
Number of extensions: 545712
Number of successful extensions: 2389
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2384
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)