Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0972X.Seq
(441 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical pr... 36 0.010
U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical pr... 36 0.010
U61946-5|AAC24389.1| 391|Caenorhabditis elegans Hypothetical pr... 36 0.013
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l... 36 0.013
U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile (un... 35 0.030
U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile (un... 34 0.040
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 33 0.12
U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily ass... 33 0.12
U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein. 33 0.12
U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein rec... 33 0.12
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 33 0.12
AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor... 33 0.12
AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor medi... 33 0.12
Z78200-8|CAB01583.2| 368|Caenorhabditis elegans Hypothetical pr... 32 0.21
Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical pr... 31 0.49
Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical pr... 31 0.49
AL117204-3|CAB55147.2| 675|Caenorhabditis elegans Hypothetical ... 30 0.86
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 1.1
U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon gu... 29 1.1
U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon gu... 29 1.1
U58764-1|AAB00723.2| 191|Caenorhabditis elegans Hypothetical pr... 29 1.1
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 1.1
AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein. 29 1.1
Z81529-10|CAB04290.1| 338|Caenorhabditis elegans Hypothetical p... 29 2.0
AY204193-1|AAO39197.1| 338|Caenorhabditis elegans nuclear recep... 29 2.0
AC024756-7|ABP57814.1| 178|Caenorhabditis elegans Hypothetical ... 28 2.6
Z81564-11|CAB04576.1| 436|Caenorhabditis elegans Hypothetical p... 28 3.5
U40420-1|AAA81430.1| 2214|Caenorhabditis elegans Hypothetical pr... 28 3.5
U56966-8|AAA98721.3| 252|Caenorhabditis elegans Hypothetical pr... 27 4.6
AC006615-8|AAK68234.1| 117|Caenorhabditis elegans Hesitation be... 27 4.6
AB067680-1|BAC00782.1| 117|Caenorhabditis elegans HEN-1 protein. 27 4.6
U58751-8|AAB00659.2| 635|Caenorhabditis elegans Hypothetical pr... 27 6.0
AF077537-6|AAC26275.1| 140|Caenorhabditis elegans Hypothetical ... 27 6.0
Z37983-10|CAA86060.4| 267|Caenorhabditis elegans Hypothetical p... 27 8.0
AF043704-2|AAX88816.1| 407|Caenorhabditis elegans Prion-like-(q... 27 8.0
>U40030-4|AAS80338.1| 909|Caenorhabditis elegans Hypothetical
protein T13C2.6a protein.
Length = 909
Score = 36.3 bits (80), Expect = 0.010
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSKDNR 80
VC+G+ DC +G DEQNC SK ++
Sbjct: 143 VCDGQRDCTNGKDEQNCTSKTSK 165
Score = 31.9 bits (69), Expect = 0.21
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
CNG EDC DG DE+ C
Sbjct: 327 CNGEEDCPDGGDEKEC 342
Score = 31.1 bits (67), Expect = 0.37
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 3 QAAVCNGREDCYDGTDEQNC 62
+A VC+G DC DG+DE +C
Sbjct: 271 KAFVCDGELDCSDGSDEDDC 290
Score = 29.1 bits (62), Expect = 1.5
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 12 VCNGREDCYDGTDE 53
VC+G EDC DG+DE
Sbjct: 184 VCDGEEDCSDGSDE 197
>U40030-3|AAS80339.1| 911|Caenorhabditis elegans Hypothetical
protein T13C2.6b protein.
Length = 911
Score = 36.3 bits (80), Expect = 0.010
Identities = 13/23 (56%), Positives = 18/23 (78%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSKDNR 80
VC+G+ DC +G DEQNC SK ++
Sbjct: 145 VCDGQRDCTNGKDEQNCTSKTSK 167
Score = 31.9 bits (69), Expect = 0.21
Identities = 11/16 (68%), Positives = 12/16 (75%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
CNG EDC DG DE+ C
Sbjct: 329 CNGEEDCPDGGDEKEC 344
Score = 31.1 bits (67), Expect = 0.37
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +3
Query: 3 QAAVCNGREDCYDGTDEQNC 62
+A VC+G DC DG+DE +C
Sbjct: 273 KAFVCDGELDCSDGSDEDDC 292
Score = 29.1 bits (62), Expect = 1.5
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = +3
Query: 12 VCNGREDCYDGTDE 53
VC+G EDC DG+DE
Sbjct: 186 VCDGEEDCSDGSDE 199
>U61946-5|AAC24389.1| 391|Caenorhabditis elegans Hypothetical
protein F47C12.2 protein.
Length = 391
Score = 35.9 bits (79), Expect = 0.013
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC---FSKDNRAYQ 89
CNG DC DG+DEQNC F + R Y+
Sbjct: 202 CNGHNDCDDGSDEQNCPSAFQPNCRTYE 229
>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
lipoprotein receptorrelated protein 2 protein.
Length = 2192
Score = 35.9 bits (79), Expect = 0.013
Identities = 12/26 (46%), Positives = 20/26 (76%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNCFSKDNRAYQF 92
C+G+ DC DG+DE+NC +K +++F
Sbjct: 170 CDGQPDCADGSDEKNCDAKKCTSFEF 195
Score = 35.5 bits (78), Expect = 0.017
Identities = 11/17 (64%), Positives = 15/17 (88%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNCF 65
C+G DCYDG+DE++CF
Sbjct: 117 CDGTNDCYDGSDEKDCF 133
Score = 35.1 bits (77), Expect = 0.023
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = +3
Query: 6 AAVCNGREDCYDGTDEQNCFSKDNR 80
A +C+G +DC DG DE+NC S D +
Sbjct: 298 AVLCDGIQDCSDGFDEKNCASLDRQ 322
Score = 32.3 bits (70), Expect = 0.16
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 6 AAVCNGREDCYDGTDEQNC 62
+A C+GR+DC DG+DE C
Sbjct: 1228 SARCDGRDDCGDGSDEDTC 1246
Score = 30.7 bits (66), Expect = 0.49
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +3
Query: 9 AVCNGREDCYDGTDEQNCFSKD 74
A+C+G DC+DG+DE KD
Sbjct: 1190 ALCDGIRDCFDGSDENPIHCKD 1211
Score = 29.9 bits (64), Expect = 0.86
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+GR DC DG DE C
Sbjct: 210 CDGRRDCPDGEDEHQC 225
Score = 29.5 bits (63), Expect = 1.1
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 9 AVCNGREDCYDGTDEQNC 62
+VC+ +DC DG+DE NC
Sbjct: 926 SVCDKEKDCDDGSDELNC 943
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +3
Query: 12 VCNGREDCYDGTDE--QNCFSKDNRAYQ 89
VC+GR DC DG DE + C S+ R ++
Sbjct: 1147 VCDGRWDCADGLDESPEMCASRKARCFR 1174
Score = 28.3 bits (60), Expect = 2.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 3 QAAVCNGREDCYDGTDEQNC 62
++ +C+G DC G DE NC
Sbjct: 1107 KSLICDGTIDCSSGKDENNC 1126
Score = 27.9 bits (59), Expect = 3.5
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G DC DG+DE+ C
Sbjct: 1012 CDGTLDCRDGSDEKGC 1027
Score = 27.5 bits (58), Expect = 4.6
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G DC DG+DE+ C
Sbjct: 1081 CDGIVDCEDGSDEKGC 1096
Score = 27.1 bits (57), Expect = 6.0
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQ 56
+C+GR DC G DEQ
Sbjct: 390 LCDGRRDCMSGIDEQ 404
Score = 26.6 bits (56), Expect = 8.0
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSKDN 77
VCN DC + DE NC +N
Sbjct: 33 VCNRINDCANFADESNCTCNEN 54
>U00035-3|AAA50645.1| 548|Caenorhabditis elegans Egg sterile
(unfertilizable) protein2 protein.
Length = 548
Score = 34.7 bits (76), Expect = 0.030
Identities = 11/20 (55%), Positives = 16/20 (80%)
Frame = +3
Query: 3 QAAVCNGREDCYDGTDEQNC 62
++ VC+G+ DC DG DE+NC
Sbjct: 308 RSQVCDGKHDCLDGIDEENC 327
Score = 33.5 bits (73), Expect = 0.070
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSKDNRAYQFLSIGVD 110
+CNG E+C DG+DE +C SK ++ QF G D
Sbjct: 196 LCNGVENCPDGSDEASCRSKCSKD-QFKCSGSD 227
Score = 31.9 bits (69), Expect = 0.21
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G +DC DG+DE+NC
Sbjct: 144 CDGLKDCSDGSDEENC 159
Score = 29.1 bits (62), Expect = 1.5
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSK 71
VC+G DC DG+DE C K
Sbjct: 271 VCDGIPDCDDGSDEHQCDCK 290
Score = 29.1 bits (62), Expect = 1.5
Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = +3
Query: 3 QAAVCNGREDCYDGTDEQNCFS-KDNRAYQFLSIGVDQSSINSSSFLVSCWMPQQKT 170
++ VC+G DC DG DE+ C K+ + D + SS W + K+
Sbjct: 392 RSKVCDGIFDCEDGADEKKCTPVKECVVESSIQFTCDNKCLESSRRCDGVWDCEDKS 448
Score = 27.9 bits (59), Expect = 3.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
CNG +C DG+DE C
Sbjct: 476 CNGVAECSDGSDEHKC 491
>U28971-1|AAA68376.2| 551|Caenorhabditis elegans Egg sterile
(unfertilizable) protein1 protein.
Length = 551
Score = 34.3 bits (75), Expect = 0.040
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+GR DC DG+DE+NC
Sbjct: 144 CDGRRDCEDGSDEENC 159
Score = 32.7 bits (71), Expect = 0.12
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 6 AAVCNGREDCYDGTDEQNCFSKDNRAYQ 89
+A C+G DC D +DE+NC N A++
Sbjct: 233 SAKCDGINDCADASDEKNCSKCQNNAHK 260
Score = 32.3 bits (70), Expect = 0.16
Identities = 10/17 (58%), Positives = 15/17 (88%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNC 62
VC+G++DC DG DE++C
Sbjct: 311 VCDGKKDCTDGMDEEDC 327
Score = 30.3 bits (65), Expect = 0.65
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNC 62
VC+G DC DG DE NC
Sbjct: 397 VCDGTPDCDDGADEINC 413
Score = 28.7 bits (61), Expect = 2.0
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNC 62
VC+G C DG+DEQ C
Sbjct: 271 VCDGVAQCADGSDEQQC 287
Score = 28.7 bits (61), Expect = 2.0
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
CNG DC DG+DE C
Sbjct: 478 CNGVADCSDGSDELKC 493
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 32.7 bits (71), Expect = 0.12
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSKD 74
+C+G +DC DG+DE NC S +
Sbjct: 534 LCDGTDDCGDGSDETNCDSNE 554
Score = 32.3 bits (70), Expect = 0.16
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSKDNRAYQ 89
VC+G +DC+DG+DE+ C S + Y+
Sbjct: 348 VCDGWKDCHDGSDEKKC-SHPRKTYK 372
Score = 31.5 bits (68), Expect = 0.28
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNC 62
VC+ R DC D +DEQNC
Sbjct: 785 VCDTRPDCLDASDEQNC 801
Score = 28.3 bits (60), Expect = 2.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 3 QAAVCNGREDCYDGTDEQNC 62
+A CN + DC DG+DE C
Sbjct: 595 KALECNHKYDCEDGSDETEC 614
Score = 26.6 bits (56), Expect = 8.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
CN + DC DG+DE C
Sbjct: 450 CNRKYDCADGSDEITC 465
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 32.7 bits (71), Expect = 0.12
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSKD 74
+C+G +DC DG+DE NC S +
Sbjct: 534 LCDGTDDCGDGSDETNCDSNE 554
Score = 32.3 bits (70), Expect = 0.16
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSKDNRAYQ 89
VC+G +DC+DG+DE+ C S + Y+
Sbjct: 348 VCDGWKDCHDGSDEKKC-SHPRKTYK 372
Score = 31.5 bits (68), Expect = 0.28
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNC 62
VC+ R DC D +DEQNC
Sbjct: 785 VCDTRPDCLDASDEQNC 801
Score = 28.3 bits (60), Expect = 2.6
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 3 QAAVCNGREDCYDGTDEQNC 62
+A CN + DC DG+DE C
Sbjct: 595 KALECNHKYDCEDGSDETEC 614
Score = 26.6 bits (56), Expect = 8.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
CN + DC DG+DE C
Sbjct: 450 CNRKYDCADGSDEITC 465
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 32.7 bits (71), Expect = 0.12
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNC 62
+C+G +DC D +DEQNC
Sbjct: 3689 ICDGNDDCGDSSDEQNC 3705
Score = 32.3 bits (70), Expect = 0.16
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 3 QAAVCNGREDCYDGTDEQNC 62
Q +C+G +DC DG DEQ C
Sbjct: 278 QLKLCDGSKDCADGADEQQC 297
Score = 30.7 bits (66), Expect = 0.49
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +3
Query: 12 VCNGREDCYDGTDE--QNCFSKDNRAYQF 92
+C+G DCYDGTDE + C A QF
Sbjct: 1205 LCDGDNDCYDGTDEDKERCPPVQCSALQF 1233
Score = 30.7 bits (66), Expect = 0.49
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G +DC DG+DE++C
Sbjct: 3159 CDGNDDCEDGSDEKDC 3174
Score = 29.9 bits (64), Expect = 0.86
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G+ DC DG+DE +C
Sbjct: 1248 CDGQSDCEDGSDEDSC 1263
Score = 29.9 bits (64), Expect = 0.86
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 3 QAAVCNGREDCYDGTDEQNCFSKDNR 80
+A +C+G +DC DG+DE + NR
Sbjct: 3022 RAFICDGEDDCGDGSDEHSRHGCGNR 3047
Score = 28.3 bits (60), Expect = 2.6
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 12 VCNGREDCYDGTDE-QNCFSKDNRAYQF 92
VC+G +DC DG+DE C K A +F
Sbjct: 201 VCDGSKDCADGSDEPDTCEFKKCTANEF 228
Score = 28.3 bits (60), Expect = 2.6
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +3
Query: 9 AVCNGREDCYDGTDE--QNCFSKDN 77
A CNG++DC D +DE Q C + D+
Sbjct: 3811 AFCNGQDDCRDNSDEDKQRCPTCDD 3835
Score = 27.9 bits (59), Expect = 3.5
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G DC DG DE++C
Sbjct: 72 CDGSGDCSDGEDEKDC 87
Score = 27.1 bits (57), Expect = 6.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 6 AAVCNGREDCYDGTDEQNC 62
A CN +DC DG+DE +C
Sbjct: 2850 AKKCNHIDDCGDGSDELDC 2868
Score = 26.6 bits (56), Expect = 8.0
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNCFSKDNRA---YQF 92
C+G+ DC D +DE++ S+++ A YQF
Sbjct: 159 CDGKYDCRDLSDEKDSCSRNHTACFQYQF 187
Score = 26.6 bits (56), Expect = 8.0
Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = +3
Query: 15 CNGREDCYDGTDEQ-NC 62
C+G DC DG+DE NC
Sbjct: 3119 CDGDNDCLDGSDEHANC 3135
>U97017-1|AAB52363.1| 2643|Caenorhabditis elegans Temporarily assigned
gene nameprotein 162 protein.
Length = 2643
Score = 32.7 bits (71), Expect = 0.12
Identities = 10/14 (71%), Positives = 13/14 (92%)
Frame = +3
Query: 12 VCNGREDCYDGTDE 53
+C+G+ DCYDGTDE
Sbjct: 987 ICDGKSDCYDGTDE 1000
Score = 31.1 bits (67), Expect = 0.37
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 3 QAAVCNGREDCYDGTDEQNC 62
Q+ VC+G+ C DG DE++C
Sbjct: 1068 QSQVCDGKMQCLDGLDEEHC 1087
Score = 28.3 bits (60), Expect = 2.6
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 15 CNGREDCYDGTDEQN-CFSKDNRAYQFLSIGVDQSSINSSSFLVSCWMPQQK 167
C+G+ DC DG+DE + C +D + G +I+ + C+ P+ K
Sbjct: 150 CDGKRDCSDGSDEHSMCHVEDPKTADSCEYGA-AMTIDG----IKCYCPKNK 196
Score = 27.5 bits (58), Expect = 4.6
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
CNG ++C +G DE++C
Sbjct: 1032 CNGVQECDNGADEEDC 1047
Score = 26.6 bits (56), Expect = 8.0
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G +DC D +DE++C
Sbjct: 1201 CDGVDDCGDNSDEKHC 1216
>U62639-1|AAD09364.1| 925|Caenorhabditis elegans lr protein.
Length = 925
Score = 32.7 bits (71), Expect = 0.12
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSKDNRAYQFLSIGVDQSSINSSSFLVSC 149
+C+G DC D +DE+NC + ++LS D S++ + SC
Sbjct: 223 LCDGDLDCDDASDEKNCQTNAPSEEEYLSGQADHMHSCSAAGMYSC 268
Score = 32.3 bits (70), Expect = 0.16
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G +DC DG+DEQ+C
Sbjct: 94 CDGEDDCRDGSDEQHC 109
Score = 29.9 bits (64), Expect = 0.86
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSKDNRAYQ 89
VC+G +DC G DE NC + + Q
Sbjct: 155 VCDGHQDCSGGDDEVNCTRRGHENMQ 180
>U62281-1|AAD09363.1| 925|Caenorhabditis elegans lipoprotein
receptor precursor protein.
Length = 925
Score = 32.7 bits (71), Expect = 0.12
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSKDNRAYQFLSIGVDQSSINSSSFLVSC 149
+C+G DC D +DE+NC + ++LS D S++ + SC
Sbjct: 223 LCDGDLDCDDASDEKNCQTNAPSEEEYLSGQADHMHSCSAAGMYSC 268
Score = 32.3 bits (70), Expect = 0.16
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G +DC DG+DEQ+C
Sbjct: 94 CDGEDDCRDGSDEQHC 109
Score = 29.9 bits (64), Expect = 0.86
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSKDNRAYQ 89
VC+G +DC G DE NC + + Q
Sbjct: 155 VCDGHQDCSGGDDEVNCTRRGHENMQ 180
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 32.7 bits (71), Expect = 0.12
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNC 62
+C+G +DC D +DEQNC
Sbjct: 3689 ICDGNDDCGDSSDEQNC 3705
Score = 32.3 bits (70), Expect = 0.16
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 3 QAAVCNGREDCYDGTDEQNC 62
Q +C+G +DC DG DEQ C
Sbjct: 278 QLKLCDGSKDCADGADEQQC 297
Score = 30.7 bits (66), Expect = 0.49
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = +3
Query: 12 VCNGREDCYDGTDE--QNCFSKDNRAYQF 92
+C+G DCYDGTDE + C A QF
Sbjct: 1205 LCDGDNDCYDGTDEDKERCPPVQCSALQF 1233
Score = 30.7 bits (66), Expect = 0.49
Identities = 9/16 (56%), Positives = 14/16 (87%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G +DC DG+DE++C
Sbjct: 3159 CDGNDDCEDGSDEKDC 3174
Score = 29.9 bits (64), Expect = 0.86
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G+ DC DG+DE +C
Sbjct: 1248 CDGQSDCEDGSDEDSC 1263
Score = 29.9 bits (64), Expect = 0.86
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 3 QAAVCNGREDCYDGTDEQNCFSKDNR 80
+A +C+G +DC DG+DE + NR
Sbjct: 3022 RAFICDGEDDCGDGSDEHSRHGCGNR 3047
Score = 28.3 bits (60), Expect = 2.6
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 12 VCNGREDCYDGTDE-QNCFSKDNRAYQF 92
VC+G +DC DG+DE C K A +F
Sbjct: 201 VCDGSKDCADGSDEPDTCEFKKCTANEF 228
Score = 28.3 bits (60), Expect = 2.6
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +3
Query: 9 AVCNGREDCYDGTDE--QNCFSKDN 77
A CNG++DC D +DE Q C + D+
Sbjct: 3811 AFCNGQDDCRDNSDEDKQRCPTCDD 3835
Score = 27.9 bits (59), Expect = 3.5
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G DC DG DE++C
Sbjct: 72 CDGSGDCSDGEDEKDC 87
Score = 27.1 bits (57), Expect = 6.0
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +3
Query: 6 AAVCNGREDCYDGTDEQNC 62
A CN +DC DG+DE +C
Sbjct: 2850 AKKCNHIDDCGDGSDELDC 2868
Score = 26.6 bits (56), Expect = 8.0
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNCFSKDNRA---YQF 92
C+G+ DC D +DE++ S+++ A YQF
Sbjct: 159 CDGKYDCRDLSDEKDSCSRNHTACFQYQF 187
Score = 26.6 bits (56), Expect = 8.0
Identities = 10/17 (58%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = +3
Query: 15 CNGREDCYDGTDEQ-NC 62
C+G DC DG+DE NC
Sbjct: 3119 CDGDNDCLDGSDEHANC 3135
>AF185706-1|AAD56241.1| 925|Caenorhabditis elegans yolk receptor
RME-2 protein.
Length = 925
Score = 32.7 bits (71), Expect = 0.12
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSKDNRAYQFLSIGVDQSSINSSSFLVSC 149
+C+G DC D +DE+NC + ++LS D S++ + SC
Sbjct: 223 LCDGDLDCDDASDEKNCQTNAPSEEEYLSGQADHMHSCSAAGMYSC 268
Score = 30.7 bits (66), Expect = 0.49
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G E C DG+DEQ+C
Sbjct: 94 CDGEEHCRDGSDEQHC 109
Score = 28.7 bits (61), Expect = 2.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSKDNRAYQ 89
VC+G DC G DE NC + + Q
Sbjct: 155 VCDGHTDCSGGDDEVNCTRRGHENMQ 180
>AF036703-1|AAB88554.3| 925|Caenorhabditis elegans Receptor
mediated endocytosis protein2 protein.
Length = 925
Score = 32.7 bits (71), Expect = 0.12
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSKDNRAYQFLSIGVDQSSINSSSFLVSC 149
+C+G DC D +DE+NC + ++LS D S++ + SC
Sbjct: 223 LCDGDLDCDDASDEKNCQTNAPSEEEYLSGQADHMHSCSAAGMYSC 268
Score = 32.3 bits (70), Expect = 0.16
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G +DC DG+DEQ+C
Sbjct: 94 CDGEDDCRDGSDEQHC 109
Score = 28.7 bits (61), Expect = 2.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSKDNRAYQ 89
VC+G DC G DE NC + + Q
Sbjct: 155 VCDGHTDCSGGDDEVNCTRRGHENMQ 180
>Z78200-8|CAB01583.2| 368|Caenorhabditis elegans Hypothetical
protein T04H1.6 protein.
Length = 368
Score = 31.9 bits (69), Expect = 0.21
Identities = 10/24 (41%), Positives = 16/24 (66%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNCFSKDNRAY 86
C+G++DC +G DE NC + + Y
Sbjct: 313 CDGKKDCLNGEDEMNCKQEGRQKY 336
Score = 31.5 bits (68), Expect = 0.28
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNCF 65
CNG DC DG+DE+ C+
Sbjct: 352 CNGETDCADGSDEKYCY 368
Score = 30.3 bits (65), Expect = 0.65
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G DC DG DE NC
Sbjct: 229 CDGHPDCADGEDENNC 244
>Z95310-2|CAB08563.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 30.7 bits (66), Expect = 0.49
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSKDNRAYQFLSIGVDQSSINSSS 134
+C+G+ DC G DE+NC +K N +S + +++ S+
Sbjct: 167 ICDGKFDCDGGDDEKNC-TKSNATTTTISNSLSTTTVVKST 206
Score = 27.9 bits (59), Expect = 3.5
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQN 59
VC+G DC DG+DE++
Sbjct: 31 VCDGARDCSDGSDEEH 46
>Z83104-6|CAB05479.1| 394|Caenorhabditis elegans Hypothetical
protein F09B12.5 protein.
Length = 394
Score = 30.7 bits (66), Expect = 0.49
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSKDNRAYQFLSIGVDQSSINSSS 134
+C+G+ DC G DE+NC +K N +S + +++ S+
Sbjct: 167 ICDGKFDCDGGDDEKNC-TKSNATTTTISNSLSTTTVVKST 206
Score = 27.9 bits (59), Expect = 3.5
Identities = 9/16 (56%), Positives = 13/16 (81%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQN 59
VC+G DC DG+DE++
Sbjct: 31 VCDGARDCSDGSDEEH 46
>AL117204-3|CAB55147.2| 675|Caenorhabditis elegans Hypothetical
protein Y116A8C.5 protein.
Length = 675
Score = 29.9 bits (64), Expect = 0.86
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +2
Query: 98 YRSRSVFNKFIEFPRVVLDATTEDRRLQFPAVY 196
+ RS F + F R+VL+ + D+R FP VY
Sbjct: 250 FSERSDFVSSVNFSRLVLEMMSPDKRTLFPEVY 282
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 29.5 bits (63), Expect = 1.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSK 71
+C+G +DC D +DE NC +K
Sbjct: 208 LCDGDDDCGDNSDELNCNAK 227
Score = 29.5 bits (63), Expect = 1.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G DC+DG+DE C
Sbjct: 253 CDGTNDCHDGSDEVGC 268
Score = 29.1 bits (62), Expect = 1.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNC 62
VC+G DC D +DE NC
Sbjct: 167 VCDGEPDCRDRSDEANC 183
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 29.5 bits (63), Expect = 1.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSK 71
+C+G +DC D +DE NC +K
Sbjct: 208 LCDGDDDCGDNSDELNCNAK 227
Score = 29.5 bits (63), Expect = 1.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G DC+DG+DE C
Sbjct: 253 CDGTNDCHDGSDEVGC 268
Score = 29.1 bits (62), Expect = 1.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNC 62
VC+G DC D +DE NC
Sbjct: 167 VCDGEPDCRDRSDEANC 183
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 29.5 bits (63), Expect = 1.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSK 71
+C+G +DC D +DE NC +K
Sbjct: 208 LCDGDDDCGDNSDELNCNAK 227
Score = 29.5 bits (63), Expect = 1.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G DC+DG+DE C
Sbjct: 253 CDGTNDCHDGSDEVGC 268
Score = 29.1 bits (62), Expect = 1.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNC 62
VC+G DC D +DE NC
Sbjct: 167 VCDGEPDCRDRSDEANC 183
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 29.5 bits (63), Expect = 1.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSK 71
+C+G +DC D +DE NC +K
Sbjct: 208 LCDGDDDCGDNSDELNCNAK 227
Score = 29.5 bits (63), Expect = 1.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G DC+DG+DE C
Sbjct: 253 CDGTNDCHDGSDEVGC 268
Score = 29.1 bits (62), Expect = 1.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNC 62
VC+G DC D +DE NC
Sbjct: 167 VCDGEPDCRDRSDEANC 183
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical
protein ZC101.2b protein.
Length = 1160
Score = 29.5 bits (63), Expect = 1.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSK 71
+C+G +DC D +DE NC +K
Sbjct: 208 LCDGDDDCGDNSDELNCNAK 227
Score = 29.5 bits (63), Expect = 1.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G DC+DG+DE C
Sbjct: 253 CDGTNDCHDGSDEVGC 268
Score = 29.1 bits (62), Expect = 1.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNC 62
VC+G DC D +DE NC
Sbjct: 167 VCDGEPDCRDRSDEANC 183
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 29.5 bits (63), Expect = 1.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSK 71
+C+G +DC D +DE NC +K
Sbjct: 208 LCDGDDDCGDNSDELNCNAK 227
Score = 29.5 bits (63), Expect = 1.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G DC+DG+DE C
Sbjct: 253 CDGTNDCHDGSDEVGC 268
Score = 29.1 bits (62), Expect = 1.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNC 62
VC+G DC D +DE NC
Sbjct: 167 VCDGEPDCRDRSDEANC 183
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 29.5 bits (63), Expect = 1.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSK 71
+C+G +DC D +DE NC +K
Sbjct: 208 LCDGDDDCGDNSDELNCNAK 227
Score = 29.5 bits (63), Expect = 1.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G DC+DG+DE C
Sbjct: 253 CDGTNDCHDGSDEVGC 268
Score = 29.1 bits (62), Expect = 1.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNC 62
VC+G DC D +DE NC
Sbjct: 167 VCDGEPDCRDRSDEANC 183
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 29.5 bits (63), Expect = 1.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSK 71
+C+G +DC D +DE NC +K
Sbjct: 208 LCDGDDDCGDNSDELNCNAK 227
Score = 29.5 bits (63), Expect = 1.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G DC+DG+DE C
Sbjct: 253 CDGTNDCHDGSDEVGC 268
Score = 29.1 bits (62), Expect = 1.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNC 62
VC+G DC D +DE NC
Sbjct: 167 VCDGEPDCRDRSDEANC 183
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 29.5 bits (63), Expect = 1.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSK 71
+C+G +DC D +DE NC +K
Sbjct: 208 LCDGDDDCGDNSDELNCNAK 227
Score = 29.5 bits (63), Expect = 1.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G DC+DG+DE C
Sbjct: 253 CDGTNDCHDGSDEVGC 268
Score = 29.1 bits (62), Expect = 1.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNC 62
VC+G DC D +DE NC
Sbjct: 167 VCDGEPDCRDRSDEANC 183
>U88183-2|AAM69080.1| 1273|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform b protein.
Length = 1273
Score = 29.5 bits (63), Expect = 1.1
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 260 TNLKPFTNYNITFYIWDSRLNKTY-ASSKYVNTTTGEGIPS-PPLRVTVRRTSGAALK 427
+NL PFTNY + S ++ + A S ++ T E PS PP V +R + L+
Sbjct: 713 SNLMPFTNYEFFVIPYHSGVHSIHGAPSNSMDVLTAEAPPSLPPEDVRIRMLNLTTLR 770
>U88183-1|AAB52657.2| 1269|Caenorhabditis elegans Sensory axon
guidance protein 3,isoform a protein.
Length = 1269
Score = 29.5 bits (63), Expect = 1.1
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 260 TNLKPFTNYNITFYIWDSRLNKTY-ASSKYVNTTTGEGIPS-PPLRVTVRRTSGAALK 427
+NL PFTNY + S ++ + A S ++ T E PS PP V +R + L+
Sbjct: 713 SNLMPFTNYEFFVIPYHSGVHSIHGAPSNSMDVLTAEAPPSLPPEDVRIRMLNLTTLR 770
>U58764-1|AAB00723.2| 191|Caenorhabditis elegans Hypothetical
protein M03E7.4 protein.
Length = 191
Score = 29.5 bits (63), Expect = 1.1
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
CNG +C DGTDE++C
Sbjct: 175 CNGLIECDDGTDERDC 190
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 29.5 bits (63), Expect = 1.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSK 71
+C+G +DC D +DE NC +K
Sbjct: 208 LCDGDDDCGDNSDELNCNAK 227
Score = 29.5 bits (63), Expect = 1.1
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+G DC+DG+DE C
Sbjct: 253 CDGTNDCHDGSDEVGC 268
Score = 29.1 bits (62), Expect = 1.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNC 62
VC+G DC D +DE NC
Sbjct: 167 VCDGEPDCRDRSDEANC 183
>AF041053-1|AAC38848.1| 1273|Caenorhabditis elegans SAX-3 protein.
Length = 1273
Score = 29.5 bits (63), Expect = 1.1
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = +2
Query: 260 TNLKPFTNYNITFYIWDSRLNKTY-ASSKYVNTTTGEGIPS-PPLRVTVRRTSGAALK 427
+NL PFTNY + S ++ + A S ++ T E PS PP V +R + L+
Sbjct: 713 SNLMPFTNYEFFVIPYHSGVHSIHGAPSNSMDVLTAEAPPSLPPEDVRIRMLNLTTLR 770
>Z81529-10|CAB04290.1| 338|Caenorhabditis elegans Hypothetical
protein F35E8.12 protein.
Length = 338
Score = 28.7 bits (61), Expect = 2.0
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 66 SKDNRAYQFLSIGVDQSSINSSSFLVSCWMPQQKTVVYNFLP 191
SK ++ YQ L G D+ NS L W +KT+ P
Sbjct: 197 SKLDKVYQHLETGEDERGKNSQVILQRFWQMNEKTMKTEVFP 238
>AY204193-1|AAO39197.1| 338|Caenorhabditis elegans nuclear receptor
NHR-108 protein.
Length = 338
Score = 28.7 bits (61), Expect = 2.0
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +3
Query: 66 SKDNRAYQFLSIGVDQSSINSSSFLVSCWMPQQKTVVYNFLP 191
SK ++ YQ L G D+ NS L W +KT+ P
Sbjct: 197 SKLDKVYQHLETGEDERGKNSQVILQRFWQMNEKTMKTEVFP 238
>AC024756-7|ABP57814.1| 178|Caenorhabditis elegans Hypothetical
protein Y34D9A.8b protein.
Length = 178
Score = 28.3 bits (60), Expect = 2.6
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNC 62
VC+G C DG+DE NC
Sbjct: 55 VCDGITQCTDGSDEWNC 71
>Z81564-11|CAB04576.1| 436|Caenorhabditis elegans Hypothetical
protein K05C4.11 protein.
Length = 436
Score = 27.9 bits (59), Expect = 3.5
Identities = 10/23 (43%), Positives = 18/23 (78%), Gaps = 2/23 (8%)
Frame = +3
Query: 12 VCNGREDCYDG--TDEQNCFSKD 74
VC+G +C +G +DEQ+C+S++
Sbjct: 351 VCDGIHNCVEGDFSDEQHCYSRE 373
>U40420-1|AAA81430.1| 2214|Caenorhabditis elegans Hypothetical protein
F40F4.6 protein.
Length = 2214
Score = 27.9 bits (59), Expect = 3.5
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -2
Query: 269 SDL*TINTVICPGHVHPFTVANFRYRRQEIV 177
SDL T N + +VH AN ++RRQEIV
Sbjct: 1920 SDLFTCNGDMIAVYVHGVDEANQKFRRQEIV 1950
>U56966-8|AAA98721.3| 252|Caenorhabditis elegans Hypothetical
protein C42D8.1 protein.
Length = 252
Score = 27.5 bits (58), Expect = 4.6
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -2
Query: 92 KLISAVVFTETVLFVGSVVTIFSAVAHRCL 3
+L V+F +F G ++ +F+ AHRC+
Sbjct: 106 QLFVLVIFLGLSMFCGVIILLFALNAHRCI 135
>AC006615-8|AAK68234.1| 117|Caenorhabditis elegans Hesitation
behavior protein 1 protein.
Length = 117
Score = 27.5 bits (58), Expect = 4.6
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 6 AAVCNGREDCYDGTDEQ--NCFSKDNRAYQF 92
A +CNG+ DC +G DE CF R+ ++
Sbjct: 74 ADLCNGKADCPNGDDENYFQCFYHRARSEEY 104
>AB067680-1|BAC00782.1| 117|Caenorhabditis elegans HEN-1 protein.
Length = 117
Score = 27.5 bits (58), Expect = 4.6
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +3
Query: 6 AAVCNGREDCYDGTDEQ--NCFSKDNRAYQF 92
A +CNG+ DC +G DE CF R+ ++
Sbjct: 74 ADLCNGKADCPNGDDENYFQCFYHRARSEEY 104
>U58751-8|AAB00659.2| 635|Caenorhabditis elegans Hypothetical
protein C07G1.2 protein.
Length = 635
Score = 27.1 bits (57), Expect = 6.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 15 CNGREDCYDGTDEQNC 62
C+ DC DG+DE NC
Sbjct: 333 CDYEVDCNDGSDEHNC 348
Score = 27.1 bits (57), Expect = 6.0
Identities = 9/17 (52%), Positives = 11/17 (64%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNC 62
+CNG+ DC G DE C
Sbjct: 570 LCNGQIDCQSGEDEDYC 586
>AF077537-6|AAC26275.1| 140|Caenorhabditis elegans Hypothetical
protein F16G10.7 protein.
Length = 140
Score = 27.1 bits (57), Expect = 6.0
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = -2
Query: 320 SICCPICKTLYYSS*MASDL*TINTVICPGHVHPFTVANF 201
S CP +T++ ++ ++ + CPG+ P+ VA F
Sbjct: 19 SDACPKLETMFDATPQIVEIDGCQDITCPGNAVPYLVATF 58
>Z37983-10|CAA86060.4| 267|Caenorhabditis elegans Hypothetical
protein B0393.7 protein.
Length = 267
Score = 26.6 bits (56), Expect = 8.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +3
Query: 12 VCNGREDCYDGTDEQNCFSKD 74
V +G+EDC D +DE C D
Sbjct: 204 VLDGQEDCLDSSDENYCEMHD 224
>AF043704-2|AAX88816.1| 407|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 72
protein.
Length = 407
Score = 26.6 bits (56), Expect = 8.0
Identities = 19/47 (40%), Positives = 25/47 (53%)
Frame = +1
Query: 43 EPTNRTVSVKTTALISFSVSESISLQ*IHRVSSCRAGCHNRRPSSTI 183
E TVS TT +S + SES SL +S R G H R P++T+
Sbjct: 205 EAETTTVSETTTTEVSTTASESTSL--FPAFASRRHG-HRRPPTTTV 248
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,502,786
Number of Sequences: 27780
Number of extensions: 217367
Number of successful extensions: 854
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 854
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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