Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0971.Seq
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 30 1.2
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 30 1.2
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk (m... 30 1.2
Z70037-4|CAA93877.1| 146|Caenorhabditis elegans Hypothetical pr... 28 5.0
AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical... 28 5.0
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF040661-12|AAG24221.1| 210|Caenorhabditis elegans Hypothetical... 28 6.7
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 541 VTTGITGL----WQPAFIATLLFDPSMSALPIIAKQNSPSV 431
VTTG++ L W PA A DP+ S P+ A+ S SV
Sbjct: 2255 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2295
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 541 VTTGITGL----WQPAFIATLLFDPSMSALPIIAKQNSPSV 431
VTTG++ L W PA A DP+ S P+ A+ S SV
Sbjct: 2277 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2317
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
R11A8.7d protein.
Length = 1427
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 541 VTTGITGL----WQPAFIATLLFDPSMSALPIIAKQNSPSV 431
VTTG++ L W PA A DP+ S P+ A+ S SV
Sbjct: 1098 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 1138
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
R11A8.7c protein.
Length = 1405
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 541 VTTGITGL----WQPAFIATLLFDPSMSALPIIAKQNSPSV 431
VTTG++ L W PA A DP+ S P+ A+ S SV
Sbjct: 1076 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 1116
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 541 VTTGITGL----WQPAFIATLLFDPSMSALPIIAKQNSPSV 431
VTTG++ L W PA A DP+ S P+ A+ S SV
Sbjct: 2255 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2295
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 541 VTTGITGL----WQPAFIATLLFDPSMSALPIIAKQNSPSV 431
VTTG++ L W PA A DP+ S P+ A+ S SV
Sbjct: 2277 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2317
>AF039047-15|AAM15588.1| 1040|Caenorhabditis elegans Human mlk
(mixed lineage kinase)homolog protein 1, isoform a
protein.
Length = 1040
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +2
Query: 44 ARVKKKTDSIDLRDPNGLRRRVSRFECETPLVKSHCLEPPDSRGSTVSISLPDSARLASA 223
AR + ++ + DPN +R V E +TPL + PP R S + ++P S +
Sbjct: 711 ARSRAQSTADGWEDPNTTKRYVKDLEKDTPLRPAQL--PPTHRKSALDQTIPASPNSPDS 768
Query: 224 LEAFRHNP 247
+ F P
Sbjct: 769 INNFHPMP 776
>Z70037-4|CAA93877.1| 146|Caenorhabditis elegans Hypothetical
protein T27D12.3 protein.
Length = 146
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -2
Query: 282 RPSGRWCEATSAGLCLNASKAEAS 211
RPSG WC GL L ++ EAS
Sbjct: 35 RPSGPWCVKLFVGLYLQGNRNEAS 58
>AL032627-14|CAA21549.1| 386|Caenorhabditis elegans Hypothetical
protein Y41C4A.11 protein.
Length = 386
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 3/52 (5%)
Frame = -3
Query: 560 SKRCQKSYHRDNWLVAASVHSDVAF---RSFDVGSSYHCEAKFAKRWIVHPS 414
S R K HR NW+ AS + +F + + + + F + VHP+
Sbjct: 151 STRAAKFIHRKNWIATASDDQQIRIFDAETFSLINEFTAHSDFIRSLTVHPT 202
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 161 PDSRGSTVSISLPDSARLASALEAFRHNPADVASHHRPLGRVHEPNV 301
PD G + ++ D LA+ E + A++ H R L + HE N+
Sbjct: 1195 PDYDGRNIDLNESDQQTLATLTEQIKVTQAEIELHRRDL-KKHESNL 1240
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 161 PDSRGSTVSISLPDSARLASALEAFRHNPADVASHHRPLGRVHEPNV 301
PD G + ++ D LA+ E + A++ H R L + HE N+
Sbjct: 1195 PDYDGRNIDLNESDQQTLATLTEQIKVTQAEIELHRRDL-KKHESNL 1240
>AF040661-12|AAG24221.1| 210|Caenorhabditis elegans Hypothetical
protein W10G11.14 protein.
Length = 210
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = -2
Query: 315 EPQFRTFGSCTRPSGRWCEATSAGLCLNASKAEA 214
EP ++ F RPSG WC AG NA KA+A
Sbjct: 41 EPGWKFFN---RPSGGWCMRVFAG--FNAKKADA 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,161,551
Number of Sequences: 27780
Number of extensions: 313698
Number of successful extensions: 974
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 949
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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