Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0968X.Seq
         (557 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    27   0.32 
X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal p...    24   2.9  
AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.        23   5.1  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    23   5.1  
DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    23   6.8  
AJ010904-1|CAA09390.1|  142|Anopheles gambiae nitric oxide synth...    23   6.8  
AY341429-1|AAR03495.1|  193|Anopheles gambiae sulfakinin preprop...    23   9.0  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   9.0  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 27.5 bits (58), Expect = 0.32
 Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 1/109 (0%)
 Frame = +1

Query: 223 AEARGGRQVRQLKELIQSVERREQARADLKGLEDTVAKELQTLHNLRKLFVQDLQARIKK 402
           A A+G   +  + E+ +     ++  A+L+ +   V+K  +T H   +L  Q      + 
Sbjct: 665 ARAKGNAVLLDVAEINRIQAMLQEKEAELRDISAEVSKIEKTAHRFGQLKEQHDMLNYEL 724

Query: 403 SNNSEDGAEDEGGSLAQ-KQKISFLENNLEQLTKVHSSSCVTIPSCDAK 546
           +N  +  A+    S  Q K++I  L   +E L K    +  T   C AK
Sbjct: 725 NNLKQRLAQT---SFQQTKEEIEELNKKIETLQKTIVEARETQTQCSAK 770



 Score = 25.8 bits (54), Expect = 0.96
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +2

Query: 107 QLSALRDELAALQRQHQDLKDTYQELTLARQQLQDDYKKLKREEADKS 250
           Q   L +++AALQ++  ++  T  E+T A   L+   K+ K +   +S
Sbjct: 837 QAVKLEEQIAALQQRLVEVSGTTDEMTAAVTALKQQIKQHKEKMNSQS 884


>X98186-1|CAA66861.1|  269|Anopheles gambiae put. S3a ribosomal
           protein homologue protein.
          Length = 269

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 11/39 (28%), Positives = 24/39 (61%), Gaps = 5/39 (12%)
 Frame = +1

Query: 244 QVRQLKELIQSVERREQARADLKG-----LEDTVAKELQ 345
           Q++ ++  + ++ +RE    DLKG     L D++AK+++
Sbjct: 163 QIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIE 201


>AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.
          Length = 133

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 340 VP*PRCLPSP*DQREPVHAAPR 275
           VP P C PS  D  + +HA P+
Sbjct: 91  VPKPCCAPSSLDHIDVLHADPK 112


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.4 bits (48), Expect = 5.1
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +1

Query: 280 ERREQARADLKGLEDTVAKELQTLHNL-RKL 369
           +RREQ + +L  L    AKE + L  + RKL
Sbjct: 716 QRREQLQRELNELNSAYAKEDERLQEMTRKL 746



 Score = 22.6 bits (46), Expect = 9.0
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = +2

Query: 119 LRDELAALQRQHQDLKDTYQELTLARQQLQDDYKKLKRE 235
           L+ EL  L   +    +  QE+T    Q Q   KKL++E
Sbjct: 721 LQRELNELNSAYAKEDERLQEMTRKLHQRQQHMKKLQQE 759


>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 10/37 (27%), Positives = 18/37 (48%)
 Frame = +2

Query: 101 STQLSALRDELAALQRQHQDLKDTYQELTLARQQLQD 211
           +TQ+ ++     + Q+QHQ     +Q   + R  L D
Sbjct: 96  NTQIPSMVSAAGSTQQQHQQHHHQHQRFQVVRAVLHD 132


>AJ010904-1|CAA09390.1|  142|Anopheles gambiae nitric oxide synthase
           protein.
          Length = 142

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 283 RREQARADLKGLEDTVAKELQTLHNLRKLFVQDL 384
           R E+     KG+ D V   L    N+ K +VQDL
Sbjct: 40  RDEKEEMVQKGVLDRVFLALSREENIPKTYVQDL 73


>AY341429-1|AAR03495.1|  193|Anopheles gambiae sulfakinin
           preproprotein protein.
          Length = 193

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +2

Query: 140 LQRQHQDLKDT 172
           LQ+QHQ LKDT
Sbjct: 57  LQQQHQRLKDT 67


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 22.6 bits (46), Expect = 9.0
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
 Frame = +2

Query: 122 RDELAALQRQHQDL--KDTYQELTLA--RQQLQDDYKKLKREEAD 244
           +DE + L  +HQ L  + T  +LT++    ++Q D K  +R E +
Sbjct: 285 KDEKSVLATEHQQLLREKTKLDLTISDLSDEVQGDNKSKERAEQE 329


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.311    0.127    0.341 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 401,638
Number of Sequences: 2352
Number of extensions: 7060
Number of successful extensions: 22
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)