Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0968X.Seq
(557 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy c... 69 2e-12
L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated p... 69 2e-12
AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy... 69 2e-12
U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical pr... 33 0.14
U10402-4|AAK95873.1| 255|Caenorhabditis elegans Hypothetical pr... 33 0.18
U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical pr... 31 0.43
U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical pr... 31 0.43
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 31 0.74
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 30 0.98
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 30 0.98
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 30 0.98
Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical pr... 30 1.3
AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical ... 30 1.3
AC024791-2|AAK95891.1| 604|Caenorhabditis elegans Temporarily a... 29 1.7
Z81538-5|CAD59148.1| 94|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 29 2.3
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 29 2.3
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 29 2.3
U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical p... 29 2.3
Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical pr... 29 3.0
X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic int... 29 3.0
Z66521-11|CAA91398.2| 471|Caenorhabditis elegans Hypothetical p... 28 4.0
AB031233-1|BAA92262.1| 605|Caenorhabditis elegans kinesin like ... 28 4.0
Z82082-11|CAH10808.1| 721|Caenorhabditis elegans Hypothetical p... 28 5.2
Z82082-9|CAB04966.2| 586|Caenorhabditis elegans Hypothetical pr... 28 5.2
AL132902-16|CAB82004.2| 721|Caenorhabditis elegans Hypothetical... 28 5.2
Z99281-52|CAB16507.3| 512|Caenorhabditis elegans Hypothetical p... 27 6.9
Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr... 27 6.9
Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical pr... 27 6.9
AF149286-1|AAF99085.1| 782|Caenorhabditis elegans KRP95 protein. 27 6.9
AF003142-6|AAK73887.1| 653|Caenorhabditis elegans Hypothetical ... 27 6.9
AF003142-5|ABQ13067.1| 474|Caenorhabditis elegans Hypothetical ... 27 6.9
AF003142-4|AAK73888.1| 856|Caenorhabditis elegans Hypothetical ... 27 6.9
AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like ... 27 6.9
>L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy
chain protein.
Length = 815
Score = 69.3 bits (162), Expect = 2e-12
Identities = 40/95 (42%), Positives = 59/95 (62%)
Frame = +1
Query: 223 AEARGGRQVRQLKELIQSVERREQARADLKGLEDTVAKELQTLHNLRKLFVQDLQARIKK 402
A G+ ++K+L+ ++QA ++K L D V EL TL NL+K F++ L AR +
Sbjct: 627 ARVESGQDAGRMKQLLV----KDQAAKEIKPLTDRVNMELTTLKNLKKEFMRVLVARCQA 682
Query: 403 SNNSEDGAEDEGGSLAQKQKISFLENNLEQLTKVH 507
+ ++E ED AQKQ+I FLENNL++LTKVH
Sbjct: 683 NQDTE--GEDSLSGPAQKQRIQFLENNLDKLTKVH 715
>L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated
protein 116 protein.
Length = 815
Score = 69.3 bits (162), Expect = 2e-12
Identities = 40/95 (42%), Positives = 59/95 (62%)
Frame = +1
Query: 223 AEARGGRQVRQLKELIQSVERREQARADLKGLEDTVAKELQTLHNLRKLFVQDLQARIKK 402
A G+ ++K+L+ ++QA ++K L D V EL TL NL+K F++ L AR +
Sbjct: 627 ARVESGQDAGRMKQLLV----KDQAAKEIKPLTDRVNMELTTLKNLKKEFMRVLVARCQA 682
Query: 403 SNNSEDGAEDEGGSLAQKQKISFLENNLEQLTKVH 507
+ ++E ED AQKQ+I FLENNL++LTKVH
Sbjct: 683 NQDTE--GEDSLSGPAQKQRIQFLENNLDKLTKVH 715
>AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy
chain protein.
Length = 815
Score = 69.3 bits (162), Expect = 2e-12
Identities = 40/95 (42%), Positives = 59/95 (62%)
Frame = +1
Query: 223 AEARGGRQVRQLKELIQSVERREQARADLKGLEDTVAKELQTLHNLRKLFVQDLQARIKK 402
A G+ ++K+L+ ++QA ++K L D V EL TL NL+K F++ L AR +
Sbjct: 627 ARVESGQDAGRMKQLLV----KDQAAKEIKPLTDRVNMELTTLKNLKKEFMRVLVARCQA 682
Query: 403 SNNSEDGAEDEGGSLAQKQKISFLENNLEQLTKVH 507
+ ++E ED AQKQ+I FLENNL++LTKVH
Sbjct: 683 NQDTE--GEDSLSGPAQKQRIQFLENNLDKLTKVH 715
>U41278-4|AAK31513.3| 928|Caenorhabditis elegans Hypothetical
protein F33G12.5 protein.
Length = 928
Score = 33.1 bits (72), Expect = 0.14
Identities = 22/83 (26%), Positives = 43/83 (51%)
Frame = +1
Query: 217 QEAEARGGRQVRQLKELIQSVERREQARADLKGLEDTVAKELQTLHNLRKLFVQDLQARI 396
+E E R R + Q EL+++++R E L+ DT+A + + RKL + L+ +
Sbjct: 706 KELEKRFARAMLQNAELVETIDRLEHINQQLELENDTIADHVVLYQHQRKLVRERLRVKD 765
Query: 397 KKSNNSEDGAEDEGGSLAQKQKI 465
++ E ED ++A+ Q++
Sbjct: 766 EQLKAME---EDRTKTVARCQEL 785
>U10402-4|AAK95873.1| 255|Caenorhabditis elegans Hypothetical
protein C34E10.11 protein.
Length = 255
Score = 32.7 bits (71), Expect = 0.18
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 1/92 (1%)
Frame = +1
Query: 217 QEAEARGGRQVRQLKELI-QSVERREQARADLKGLEDTVAKELQTLHNLRKLFVQDLQAR 393
Q EA + +L ELI Q+ +R E+ RA K E AKE +++ +++++
Sbjct: 103 QGIEAMKEAEALELDELIAQNEKRNEEKRAARKEREAEDAKETKSV------ILEEIRVE 156
Query: 394 IKKSNNSEDGAEDEGGSLAQKQKISFLENNLE 489
++K N + AEDE + + +NLE
Sbjct: 157 LEKRNAGKKQAEDEVKNAISRSSEFITRSNLE 188
>U55369-5|AAM29663.2| 1046|Caenorhabditis elegans Hypothetical
protein C18C4.5b protein.
Length = 1046
Score = 31.5 bits (68), Expect = 0.43
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 98 HSTQLSALRDELAALQRQHQDLKDTYQELTLARQQLQDDYKKLKREEADKSAN 256
H+ +L LR+EL +H L+ +E QLQD REE ++S+N
Sbjct: 731 HNKELEKLREELKKSHTEHTSLESVLEEQQNELAQLQDQL----REEKEQSSN 779
Score = 28.7 bits (61), Expect = 3.0
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Frame = +1
Query: 214 LQEAEARGGRQVRQLKELIQSVERR-EQARADLKGLEDTVAKELQTLHNLRKLFVQDL-- 384
+ EA RQ++ LKE + S+ R E +R ++ L++ K L + + ++DL
Sbjct: 576 MTEASITSDRQIQSLKEKVDSLTRELESSRRRMEQLQEDQTKFLGSHDETKAEMMKDLHE 635
Query: 385 -QARIKKSNNSEDGAEDEGGSLAQKQKISFLENNLEQL 495
Q I+K N + + +L + + S +N E+L
Sbjct: 636 AQDEIEKLTNQAGQLKSKNETLTTELEDS--QNLCERL 671
>U55369-4|AAM29662.1| 1022|Caenorhabditis elegans Hypothetical
protein C18C4.5a protein.
Length = 1022
Score = 31.5 bits (68), Expect = 0.43
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 98 HSTQLSALRDELAALQRQHQDLKDTYQELTLARQQLQDDYKKLKREEADKSAN 256
H+ +L LR+EL +H L+ +E QLQD REE ++S+N
Sbjct: 731 HNKELEKLREELKKSHTEHTSLESVLEEQQNELAQLQDQL----REEKEQSSN 779
Score = 28.7 bits (61), Expect = 3.0
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Frame = +1
Query: 214 LQEAEARGGRQVRQLKELIQSVERR-EQARADLKGLEDTVAKELQTLHNLRKLFVQDL-- 384
+ EA RQ++ LKE + S+ R E +R ++ L++ K L + + ++DL
Sbjct: 576 MTEASITSDRQIQSLKEKVDSLTRELESSRRRMEQLQEDQTKFLGSHDETKAEMMKDLHE 635
Query: 385 -QARIKKSNNSEDGAEDEGGSLAQKQKISFLENNLEQL 495
Q I+K N + + +L + + S +N E+L
Sbjct: 636 AQDEIEKLTNQAGQLKSKNETLTTELEDS--QNLCERL 671
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 30.7 bits (66), Expect = 0.74
Identities = 26/105 (24%), Positives = 56/105 (53%), Gaps = 9/105 (8%)
Frame = +1
Query: 214 LQEAEARGGRQVRQLKELIQSVERREQARADLKGLEDTVAKELQTLH----NLRKLF-VQ 378
++E++A+ ++KEL S+E ++A AD + + +EL+ + NL + F V+
Sbjct: 1153 IEESQAKSEELNSRIKELQASIEFAQKALADTENAKQEKVEELEKVQEQMLNLVQAFEVE 1212
Query: 379 DLQARIK---KSNNSEDGAEDEGGSLAQKQK-ISFLENNLEQLTK 501
R++ +N+ + E +L+QK+ I LE+ +E +++
Sbjct: 1213 KASIRLEWNSSLSNANEKLEAAEEALSQKENTIVTLESRIETISQ 1257
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 30.3 bits (65), Expect = 0.98
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +1
Query: 208 GRLQEAEARGGRQVRQLKELIQSVER-REQARADL---KGLEDTVAKELQTLHNLRKLFV 375
GRL + RQV +L+ IQ+ R + Q +L K + ++E Q L NL K
Sbjct: 1294 GRLNSENSDLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLA 1353
Query: 376 QDLQARIKKSNNSEDGAEDEGGSLAQKQKI 465
++L+ ++K+S E ++E K +
Sbjct: 1354 RELE-QLKESIEDEVAGKNEASRQLSKASV 1382
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 30.3 bits (65), Expect = 0.98
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +1
Query: 208 GRLQEAEARGGRQVRQLKELIQSVER-REQARADL---KGLEDTVAKELQTLHNLRKLFV 375
GRL + RQV +L+ IQ+ R + Q +L K + ++E Q L NL K
Sbjct: 1294 GRLNSENSDLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLA 1353
Query: 376 QDLQARIKKSNNSEDGAEDEGGSLAQKQKI 465
++L+ ++K+S E ++E K +
Sbjct: 1354 RELE-QLKESIEDEVAGKNEASRQLSKASV 1382
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 30.3 bits (65), Expect = 0.98
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +1
Query: 208 GRLQEAEARGGRQVRQLKELIQSVER-REQARADL---KGLEDTVAKELQTLHNLRKLFV 375
GRL + RQV +L+ IQ+ R + Q +L K + ++E Q L NL K
Sbjct: 1294 GRLNSENSDLARQVEELEAKIQAANRLKLQFSNELDHAKRQAEEESRERQNLSNLSKNLA 1353
Query: 376 QDLQARIKKSNNSEDGAEDEGGSLAQKQKI 465
++L+ ++K+S E ++E K +
Sbjct: 1354 RELE-QLKESIEDEVAGKNEASRQLSKASV 1382
>Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical protein
Y48E1A.1a protein.
Length = 1737
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +1
Query: 316 LEDTVAKELQTLHNLRKLFVQDLQARIKKSNNSEDGAEDEGGSLAQKQKISFLENNLEQL 495
L+ + K L+ + V+D + + EDG + + K+ + FLE+NLE +
Sbjct: 1024 LQRCIIKHLEGIRVHYDSTVRDHDGSVIQFRYGEDGMDTTKATFLNKKTMPFLEDNLEAV 1083
Query: 496 TKVHSSSCVT 525
T VT
Sbjct: 1084 TLASKPEGVT 1093
>Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical protein
Y48E1A.1a protein.
Length = 1737
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +1
Query: 316 LEDTVAKELQTLHNLRKLFVQDLQARIKKSNNSEDGAEDEGGSLAQKQKISFLENNLEQL 495
L+ + K L+ + V+D + + EDG + + K+ + FLE+NLE +
Sbjct: 1024 LQRCIIKHLEGIRVHYDSTVRDHDGSVIQFRYGEDGMDTTKATFLNKKTMPFLEDNLEAV 1083
Query: 496 TKVHSSSCVT 525
T VT
Sbjct: 1084 TLASKPEGVT 1093
>AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical
protein Y48E1A.1a protein.
Length = 1737
Score = 29.9 bits (64), Expect = 1.3
Identities = 18/70 (25%), Positives = 31/70 (44%)
Frame = +1
Query: 316 LEDTVAKELQTLHNLRKLFVQDLQARIKKSNNSEDGAEDEGGSLAQKQKISFLENNLEQL 495
L+ + K L+ + V+D + + EDG + + K+ + FLE+NLE +
Sbjct: 1024 LQRCIIKHLEGIRVHYDSTVRDHDGSVIQFRYGEDGMDTTKATFLNKKTMPFLEDNLEAV 1083
Query: 496 TKVHSSSCVT 525
T VT
Sbjct: 1084 TLASKPEGVT 1093
>AC024791-2|AAK95891.1| 604|Caenorhabditis elegans Temporarily
assigned gene nameprotein 63 protein.
Length = 604
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Frame = +1
Query: 244 QVRQLKELIQSVERREQARADLKGLEDT----VAKELQTLHNLRKLFVQDLQARIKKS 405
+++Q S +R E AD L++ + +ELQ + N +K +Q +QAR+++S
Sbjct: 3 RIKQAPTKRHSFKRMESREADESFLDEEEIERIKEELQRVQNEKKKHIQRMQARLEQS 60
>Z81538-5|CAD59148.1| 94|Caenorhabditis elegans Hypothetical
protein F45H10.5 protein.
Length = 94
Score = 29.1 bits (62), Expect = 2.3
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 343 QTLHNLRKLFVQDLQARIKKSNNSEDGAEDEGGSLAQ 453
+T H LR+L ++ +ARI+ S SE+ E+ S AQ
Sbjct: 54 RTYHTLRRLSRRNGEARIRMSIKSEEQEEESNDSPAQ 90
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/74 (21%), Positives = 38/74 (51%)
Frame = +1
Query: 265 LIQSVERREQARADLKGLEDTVAKELQTLHNLRKLFVQDLQARIKKSNNSEDGAEDEGGS 444
L ++ +R+++ DL+ + + +E L ++ +++ +K++ + DG +E
Sbjct: 979 LEENQQRQKRFEEDLRSFDSSHQRESILKDQLTRMIIENKIKELKRTLATFDGQINEDRI 1038
Query: 445 LAQKQKISFLENNL 486
QKQ + L+N L
Sbjct: 1039 TEQKQAYNKLQNEL 1052
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical protein
T04H1.4a protein.
Length = 1298
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/74 (21%), Positives = 38/74 (51%)
Frame = +1
Query: 265 LIQSVERREQARADLKGLEDTVAKELQTLHNLRKLFVQDLQARIKKSNNSEDGAEDEGGS 444
L ++ +R+++ DL+ + + +E L ++ +++ +K++ + DG +E
Sbjct: 965 LEENQQRQKRFEEDLRSFDSSHQRESILKDQLTRMIIENKIKELKRTLATFDGQINEDRI 1024
Query: 445 LAQKQKISFLENNL 486
QKQ + L+N L
Sbjct: 1025 TEQKQAYNKLQNEL 1038
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/89 (23%), Positives = 39/89 (43%)
Frame = +1
Query: 220 EAEARGGRQVRQLKELIQSVERREQARADLKGLEDTVAKELQTLHNLRKLFVQDLQARIK 399
E + + Q RQL++ R +DL + + +L +LH L+ LQ+++
Sbjct: 1271 ELQTKADEQSRQLQDFAALKNRLNNENSDLNRSLEEMDNQLNSLHRLK----STLQSQLD 1326
Query: 400 KSNNSEDGAEDEGGSLAQKQKISFLENNL 486
++ + D E +LA K EN +
Sbjct: 1327 ETRRNYDEESRERQALAATAKNLEHENTI 1355
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +2
Query: 104 TQLSALRDELAALQRQHQDL----KDTYQELTLARQQLQDDYKKLKREEADKSAN*RN 265
++LS + +L +Q +++DL K T QEL+ ++ +QD L++ E +K + N
Sbjct: 930 SKLSDITGQLEDMQERNEDLARQKKKTDQELSDTKKHVQDLELSLRKAEQEKQSRDHN 987
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 29.1 bits (62), Expect = 2.3
Identities = 16/74 (21%), Positives = 38/74 (51%)
Frame = +1
Query: 265 LIQSVERREQARADLKGLEDTVAKELQTLHNLRKLFVQDLQARIKKSNNSEDGAEDEGGS 444
L ++ +R+++ DL+ + + +E L ++ +++ +K++ + DG +E
Sbjct: 965 LEENQQRQKRFEEDLRSFDSSHQRESILKDQLTRMIIENKIKELKRTLATFDGQINEDRI 1024
Query: 445 LAQKQKISFLENNL 486
QKQ + L+N L
Sbjct: 1025 TEQKQAYNKLQNEL 1038
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/89 (23%), Positives = 39/89 (43%)
Frame = +1
Query: 220 EAEARGGRQVRQLKELIQSVERREQARADLKGLEDTVAKELQTLHNLRKLFVQDLQARIK 399
E + + Q RQL++ R +DL + + +L +LH L+ LQ+++
Sbjct: 1271 ELQTKADEQSRQLQDFAALKNRLNNENSDLNRSLEEMDNQLNSLHRLK----STLQSQLD 1326
Query: 400 KSNNSEDGAEDEGGSLAQKQKISFLENNL 486
++ + D E +LA K EN +
Sbjct: 1327 ETRRNYDEESRERQALAATAKNLEHENTI 1355
Score = 28.3 bits (60), Expect = 4.0
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 4/58 (6%)
Frame = +2
Query: 104 TQLSALRDELAALQRQHQDL----KDTYQELTLARQQLQDDYKKLKREEADKSAN*RN 265
++LS + +L +Q +++DL K T QEL+ ++ +QD L++ E +K + N
Sbjct: 930 SKLSDITGQLEDMQERNEDLARQKKKTDQELSDTKKHVQDLELSLRKAEQEKQSRDHN 987
>U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical
protein T08A9.1 protein.
Length = 1330
Score = 29.1 bits (62), Expect = 2.3
Identities = 21/87 (24%), Positives = 39/87 (44%)
Frame = +1
Query: 235 GGRQVRQLKELIQSVERREQARADLKGLEDTVAKELQTLHNLRKLFVQDLQARIKKSNNS 414
G + ++KEL +SVE E + K E + +L + K +++ QA K +
Sbjct: 759 GDKLKNRVKELGESVESLETELENKKSTESNLEAKLAEMTVSHKKEIENTQAECIKRMSV 818
Query: 415 EDGAEDEGGSLAQKQKISFLENNLEQL 495
E + S K++I + +E+L
Sbjct: 819 EFELMTDSMSRQSKEQIESKDREIEEL 845
>Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 104 TQLSALRDELAALQRQHQDLKDTYQELTLARQQLQDDYKKLKREEADKSAN*R 262
TQLS LR +LA L+ ++ L+ QEL QL+DD + + D+ + R
Sbjct: 324 TQLSDLRGKLADLESRNSLLEKQIQEL---NYQLEDDQRSYEAALNDRDSQIR 373
>Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 104 TQLSALRDELAALQRQHQDLKDTYQELTLARQQLQDDYKKLKREEADKSAN*R 262
TQLS LR +LA L+ ++ L+ QEL QL+DD + + D+ + R
Sbjct: 332 TQLSDLRGKLADLESRNSLLEKQIQEL---NYQLEDDQRSYEAALNDRDSQIR 381
>Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 104 TQLSALRDELAALQRQHQDLKDTYQELTLARQQLQDDYKKLKREEADKSAN*R 262
TQLS LR +LA L+ ++ L+ QEL QL+DD + + D+ + R
Sbjct: 332 TQLSDLRGKLADLESRNSLLEKQIQEL---NYQLEDDQRSYEAALNDRDSQIR 381
>Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 104 TQLSALRDELAALQRQHQDLKDTYQELTLARQQLQDDYKKLKREEADKSAN*R 262
TQLS LR +LA L+ ++ L+ QEL QL+DD + + D+ + R
Sbjct: 324 TQLSDLRGKLADLESRNSLLEKQIQEL---NYQLEDDQRSYEAALNDRDSQIR 373
>Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 104 TQLSALRDELAALQRQHQDLKDTYQELTLARQQLQDDYKKLKREEADKSAN*R 262
TQLS LR +LA L+ ++ L+ QEL QL+DD + + D+ + R
Sbjct: 332 TQLSDLRGKLADLESRNSLLEKQIQEL---NYQLEDDQRSYEAALNDRDSQIR 381
>Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 104 TQLSALRDELAALQRQHQDLKDTYQELTLARQQLQDDYKKLKREEADKSAN*R 262
TQLS LR +LA L+ ++ L+ QEL QL+DD + + D+ + R
Sbjct: 332 TQLSDLRGKLADLESRNSLLEKQIQEL---NYQLEDDQRSYEAALNDRDSQIR 381
>X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 592
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +2
Query: 104 TQLSALRDELAALQRQHQDLKDTYQELTLARQQLQDDYKKLKREEADKSAN*R 262
TQLS LR +LA L+ ++ L+ QEL QL+DD + + D+ + R
Sbjct: 351 TQLSDLRGKLADLESRNSLLEKQIQEL---NYQLEDDQRSYEAALNDRDSQIR 400
>Z66521-11|CAA91398.2| 471|Caenorhabditis elegans Hypothetical
protein W02B12.7 protein.
Length = 471
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 107 QLSALRDELAALQRQHQDLKDTYQELTLARQQLQDDYKKLKREE 238
++ LR+ELA L+ + + L+D +E + +L + + LKRE+
Sbjct: 71 KVKTLRNELADLKLKLRQLEDDNKEKDMENDRLIQENRTLKREK 114
>AB031233-1|BAA92262.1| 605|Caenorhabditis elegans kinesin like
protein protein.
Length = 605
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/44 (31%), Positives = 27/44 (61%)
Frame = +2
Query: 107 QLSALRDELAALQRQHQDLKDTYQELTLARQQLQDDYKKLKREE 238
++ LR+ELA L+ + + L+D +E + +L + + LKRE+
Sbjct: 205 KVKTLRNELADLKLKLRQLEDDNKEKDMENDRLIQENRTLKREK 248
>Z82082-11|CAH10808.1| 721|Caenorhabditis elegans Hypothetical
protein Y71A12B.12a protein.
Length = 721
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 268 IQSVERREQARA-DLKGLEDTVAKELQTLHNLRKLFVQDLQARIKKS 405
+Q + + R L+GLE A++L+ L L+ L V D+ R+K +
Sbjct: 192 LQGISNLQNLRQLSLRGLEFKRAQDLEELFTLKHLNVLDMSIRLKNA 238
>Z82082-9|CAB04966.2| 586|Caenorhabditis elegans Hypothetical
protein Y71A12B.12b protein.
Length = 586
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 268 IQSVERREQARA-DLKGLEDTVAKELQTLHNLRKLFVQDLQARIKKS 405
+Q + + R L+GLE A++L+ L L+ L V D+ R+K +
Sbjct: 57 LQGISNLQNLRQLSLRGLEFKRAQDLEELFTLKHLNVLDMSIRLKNA 103
>AL132902-16|CAB82004.2| 721|Caenorhabditis elegans Hypothetical
protein Y71A12B.12a protein.
Length = 721
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +1
Query: 268 IQSVERREQARA-DLKGLEDTVAKELQTLHNLRKLFVQDLQARIKKS 405
+Q + + R L+GLE A++L+ L L+ L V D+ R+K +
Sbjct: 192 LQGISNLQNLRQLSLRGLEFKRAQDLEELFTLKHLNVLDMSIRLKNA 238
>Z99281-52|CAB16507.3| 512|Caenorhabditis elegans Hypothetical
protein Y57G11C.5 protein.
Length = 512
Score = 27.5 bits (58), Expect = 6.9
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +1
Query: 376 QDLQARIKKSNNSEDGAEDEGGSLAQKQKISFLENNLEQLTKVHSSSCVTIP 531
Q L R++KS ED +++ A+K++ + NLEQ T S+S ++ P
Sbjct: 431 QKLMRRVRKS---EDREKEKDKKRARKEQKNQKVENLEQSTTASSTSSLSSP 479
>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical
protein F20C5.2b protein.
Length = 1130
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 122 RDELAALQRQHQDLKDTYQELTLARQQLQDDYKKLKR 232
R+ + AL+RQ +D D Q + R +++ KKLK+
Sbjct: 470 REMVEALERQEEDTVDLKQTFSDLRTEVEAKTKKLKK 506
>Z68161-6|CAA92295.2| 782|Caenorhabditis elegans Hypothetical
protein F20C5.2a protein.
Length = 782
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 122 RDELAALQRQHQDLKDTYQELTLARQQLQDDYKKLKR 232
R+ + AL+RQ +D D Q + R +++ KKLK+
Sbjct: 484 REMVEALERQEEDTVDLKQTFSDLRTEVEAKTKKLKK 520
>AF149286-1|AAF99085.1| 782|Caenorhabditis elegans KRP95 protein.
Length = 782
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 122 RDELAALQRQHQDLKDTYQELTLARQQLQDDYKKLKR 232
R+ + AL+RQ +D D Q + R +++ KKLK+
Sbjct: 484 REMVEALERQEEDTVDLKQTFSDLRTEVEAKTKKLKK 520
>AF003142-6|AAK73887.1| 653|Caenorhabditis elegans Hypothetical
protein F57C9.4a protein.
Length = 653
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 149 QHQDLKDTYQELTLARQQLQDDYKKLKR 232
QHQ K +ELT QQ + DY LK+
Sbjct: 138 QHQSQKTKVEELTKQLQQARVDYNTLKQ 165
>AF003142-5|ABQ13067.1| 474|Caenorhabditis elegans Hypothetical
protein F57C9.4c protein.
Length = 474
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 149 QHQDLKDTYQELTLARQQLQDDYKKLKR 232
QHQ K +ELT QQ + DY LK+
Sbjct: 138 QHQSQKTKVEELTKQLQQARVDYNTLKQ 165
>AF003142-4|AAK73888.1| 856|Caenorhabditis elegans Hypothetical
protein F57C9.4b protein.
Length = 856
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +2
Query: 149 QHQDLKDTYQELTLARQQLQDDYKKLKR 232
QHQ K +ELT QQ + DY LK+
Sbjct: 138 QHQSQKTKVEELTKQLQQARVDYNTLKQ 165
>AB017106-1|BAA88837.1| 607|Caenorhabditis elegans Kinesin like
protein (klp-11) protein.
Length = 607
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 122 RDELAALQRQHQDLKDTYQELTLARQQLQDDYKKLKR 232
R+ + AL+RQ +D D Q + R +++ KKLK+
Sbjct: 433 REMVEALERQEEDTVDLKQTFSDLRTEVEAKTKKLKK 469
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.311 0.127 0.341
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,886,687
Number of Sequences: 27780
Number of extensions: 162810
Number of successful extensions: 647
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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