Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0965.Seq
         (470 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    25   1.8  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            24   3.1  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            24   3.1  
DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist mic...    22   9.4  
AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    22   9.4  

>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 24.6 bits (51), Expect = 1.8
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +1

Query: 274 YKSVSSAVFADHNQLRSTKFLPAHSVLP 357
           YK V S V       R ++F P HS+LP
Sbjct: 141 YKRVESPVLPPVLVPRHSEFAPGHSLLP 168


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 204  DVKLQNQEWKTYIDSRNTGNF 142
            D+K   QE++   D+RN+GN+
Sbjct: 3204 DLKQTVQEYRQLADNRNSGNW 3224


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -3

Query: 204  DVKLQNQEWKTYIDSRNTGNF 142
            D+K   QE++   D+RN+GN+
Sbjct: 3207 DLKQTVQEYRQLADNRNSGNW 3227


>DQ383732-1|ABD47743.1|  201|Anopheles gambiae IAP-antagonist
           michelob_x protein.
          Length = 201

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = -2

Query: 406 VTAGFTPEPSPFEQMSQEELNAQAKTLLSAAGYGPQK 296
           VTA  TP+P           N Q  +++SAAG   Q+
Sbjct: 77  VTAA-TPQPPAASMPPSTTTNTQIPSMVSAAGSTQQQ 112


>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 22.2 bits (45), Expect = 9.4
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 102 VHYNPPPT 125
           VHY PPPT
Sbjct: 84  VHYQPPPT 91


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 515,422
Number of Sequences: 2352
Number of extensions: 10610
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 41245467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)