Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0965.Seq
         (470 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z74031-17|CAN86923.1|  380|Caenorhabditis elegans Hypothetical p...    28   3.9  
Z74031-16|CAA98452.1|  378|Caenorhabditis elegans Hypothetical p...    28   3.9  
AC087081-12|AAK66039.2|  324|Caenorhabditis elegans Hypothetical...    27   6.8  
Z92828-7|CAE48500.1|  700|Caenorhabditis elegans Hypothetical pr...    27   9.0  
Z81561-2|CAB04551.2|  700|Caenorhabditis elegans Hypothetical pr...    27   9.0  
Z22174-2|CAA80130.2|  410|Caenorhabditis elegans Hypothetical pr...    27   9.0  
Z11126-7|CAO82061.1|  522|Caenorhabditis elegans Hypothetical pr...    27   9.0  
Z11126-6|CAA77471.2|  480|Caenorhabditis elegans Hypothetical pr...    27   9.0  
U29378-1|AAA68724.1|  168|Caenorhabditis elegans Hypothetical pr...    27   9.0  
AF342986-1|AAL73338.1|  700|Caenorhabditis elegans KAL-1 protein.      27   9.0  

>Z74031-17|CAN86923.1|  380|Caenorhabditis elegans Hypothetical
           protein F32D8.7b protein.
          Length = 380

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -2

Query: 466 LMTEKVLG-TGEKPAWHFTPDVTAGFTPEPSP 374
           + T   LG TG+ P  +F+P+  AG  P P P
Sbjct: 282 MFTGSGLGPTGQGPLGNFSPNPNAGAAPNPGP 313


>Z74031-16|CAA98452.1|  378|Caenorhabditis elegans Hypothetical
           protein F32D8.7a protein.
          Length = 378

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = -2

Query: 466 LMTEKVLG-TGEKPAWHFTPDVTAGFTPEPSP 374
           + T   LG TG+ P  +F+P+  AG  P P P
Sbjct: 280 MFTGSGLGPTGQGPLGNFSPNPNAGAAPNPGP 311


>AC087081-12|AAK66039.2|  324|Caenorhabditis elegans Hypothetical
           protein Y82E9BL.17 protein.
          Length = 324

 Score = 27.1 bits (57), Expect = 6.8
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +1

Query: 184 LILQFNIYAKVLFPHRCYSNRN 249
           ++L++    K+  PH+CY+N+N
Sbjct: 127 ILLRYASELKISAPHKCYTNKN 148


>Z92828-7|CAE48500.1|  700|Caenorhabditis elegans Hypothetical
           protein K03D10.1 protein.
          Length = 700

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
 Frame = +3

Query: 63  LNALTLIMSGKWR--VHYNPPPT 125
           L A  ++ SG W   VH+NPPP+
Sbjct: 272 LGASKVVASGLWNQMVHWNPPPS 294


>Z81561-2|CAB04551.2|  700|Caenorhabditis elegans Hypothetical
           protein K03D10.1 protein.
          Length = 700

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
 Frame = +3

Query: 63  LNALTLIMSGKWR--VHYNPPPT 125
           L A  ++ SG W   VH+NPPP+
Sbjct: 272 LGASKVVASGLWNQMVHWNPPPS 294


>Z22174-2|CAA80130.2|  410|Caenorhabditis elegans Hypothetical
           protein K01B6.3 protein.
          Length = 410

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +2

Query: 188 FCNLTSTPRFFFHIDATAIAIFYGFLKCYTKASVQRFLRTI 310
           +C + S P   F + A   AIFY F   +  + V+R  R +
Sbjct: 110 WCEVYSKPLMVFFLTALQYAIFYSFKVIFMISIVERNARLL 150


>Z11126-7|CAO82061.1|  522|Caenorhabditis elegans Hypothetical
           protein ZK643.3b protein.
          Length = 522

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 147 CRCYGYRYRFSIPDFAI 197
           C CY   Y ++IP+FA+
Sbjct: 78  CNCYNREYVYNIPEFAL 94


>Z11126-6|CAA77471.2|  480|Caenorhabditis elegans Hypothetical
           protein ZK643.3a protein.
          Length = 480

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 147 CRCYGYRYRFSIPDFAI 197
           C CY   Y ++IP+FA+
Sbjct: 78  CNCYNREYVYNIPEFAL 94


>U29378-1|AAA68724.1|  168|Caenorhabditis elegans Hypothetical
           protein F08C6.5 protein.
          Length = 168

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +2

Query: 218 FFHIDATA-IAIFYGFLKCYTKASVQRFLRTITSCAQQSFCLRIQFF 355
           F   D+ A I++FYG  + +  A +Q F  T+ S    SFCL + FF
Sbjct: 72  FLASDSIAVISLFYGITRQHA-AFLQPF--TVLSILTVSFCLLLSFF 115


>AF342986-1|AAL73338.1|  700|Caenorhabditis elegans KAL-1 protein.
          Length = 700

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
 Frame = +3

Query: 63  LNALTLIMSGKWR--VHYNPPPT 125
           L A  ++ SG W   VH+NPPP+
Sbjct: 272 LGASKVVASGLWNQMVHWNPPPS 294


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,365,135
Number of Sequences: 27780
Number of extensions: 244674
Number of successful extensions: 562
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 549
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 562
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)