Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0964.Seq
(699 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 101 7e-22
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 101 7e-22
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 101 7e-22
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 46 3e-05
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 46 3e-05
Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 43 2e-04
U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome re... 42 3e-04
AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome re... 42 3e-04
Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical pr... 42 4e-04
AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical ... 42 4e-04
AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical ... 42 4e-04
Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical pr... 41 0.001
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 40 0.002
Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical pr... 38 0.005
Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical pr... 38 0.005
L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein. 38 0.005
AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome re... 38 0.007
Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical pr... 33 0.15
Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical pr... 33 0.15
U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical pr... 33 0.15
U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome regu... 33 0.15
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 30 1.4
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 30 1.4
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical pr... 30 1.4
AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical ... 29 2.4
AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical ... 29 3.2
Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical pr... 28 7.4
AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein. 28 7.4
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 101 bits (241), Expect = 7e-22
Identities = 45/49 (91%), Positives = 48/49 (97%)
Frame = -1
Query: 456 PVPEISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFP 310
PVPEI+RAHFEEAMKFARRSV+DNDIRKYEMFAQTLQQSRGFG NF+FP
Sbjct: 738 PVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFP 786
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/63 (69%), Positives = 55/63 (87%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEI 518
PDE SR IL+A+LRK+P++KD+DL+++AK T GFSGADLTEICQRACKLAIR++IE EI
Sbjct: 655 PDEASRHQILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEI 714
Query: 517 HRE 509
E
Sbjct: 715 RIE 717
Score = 47.6 bits (108), Expect = 9e-06
Identities = 24/57 (42%), Positives = 30/57 (52%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQAIE 527
PD R ILR + + +A DVDL IA GF GADL +C A IR+ +E
Sbjct: 378 PDAVGRLEILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKME 434
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 101 bits (241), Expect = 7e-22
Identities = 45/49 (91%), Positives = 48/49 (97%)
Frame = -1
Query: 456 PVPEISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFP 310
PVPEI+RAHFEEAMKFARRSV+DNDIRKYEMFAQTLQQSRGFG NF+FP
Sbjct: 736 PVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFP 784
Score = 92.3 bits (219), Expect = 3e-19
Identities = 42/63 (66%), Positives = 54/63 (85%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEI 518
PDE SR I +A+LRK+P++ D+DL+++AK T GFSGADLTEICQRACKLAIR++IE EI
Sbjct: 653 PDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREI 712
Query: 517 HRE 509
+E
Sbjct: 713 RQE 715
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQAIE 527
PD R ILR + + + +DVDL +A GF GADL +C A IR+ +E
Sbjct: 377 PDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKME 433
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 101 bits (241), Expect = 7e-22
Identities = 45/49 (91%), Positives = 48/49 (97%)
Frame = -1
Query: 456 PVPEISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFP 310
PVPEI+RAHFEEAMKFARRSV+DNDIRKYEMFAQTLQQSRGFG NF+FP
Sbjct: 736 PVPEITRAHFEEAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFP 784
Score = 92.3 bits (219), Expect = 3e-19
Identities = 42/63 (66%), Positives = 54/63 (85%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEI 518
PDE SR I +A+LRK+P++ D+DL+++AK T GFSGADLTEICQRACKLAIR++IE EI
Sbjct: 653 PDEASRLQIFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREI 712
Query: 517 HRE 509
+E
Sbjct: 713 RQE 715
Score = 46.0 bits (104), Expect = 3e-05
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQAIE 527
PD R ILR + + + +DVDL +A GF GADL +C A IR+ +E
Sbjct: 377 PDAVGRLEILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKME 433
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/57 (43%), Positives = 35/57 (61%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQAIE 527
PDE +RE IL + K +A DV L IAK+T G+ GADL + + A K+AI + +
Sbjct: 402 PDETAREKILE-KICKVNLAGDVTLKQIAKLTPGYVGADLQALIREAAKVAIDRVFD 457
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSP---IAKDVDLSYIAKVTQ--GFSGADLTEICQRACKLAIRQA 533
P + R ILR + + + +D+D IA++ + GF+GADL + + LA++
Sbjct: 702 PSVEDRVDILRKSTKNGTRPMLGEDIDFHEIAQLPELAGFTGADLAALIHESSLLALQAR 761
Query: 532 I 530
+
Sbjct: 762 V 762
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 46.0 bits (104), Expect = 3e-05
Identities = 25/57 (43%), Positives = 35/57 (61%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQAIE 527
PDE +RE IL + K +A DV L IAK+T G+ GADL + + A K+AI + +
Sbjct: 402 PDETAREKILE-KICKVNLAGDVTLKQIAKLTPGYVGADLQALIREAAKVAIDRVFD 457
>Z98866-1|CAB11558.1| 416|Caenorhabditis elegans Hypothetical
protein Y49E10.1 protein.
Length = 416
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/54 (35%), Positives = 34/54 (62%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQ 536
PDEK+R IL+ + RK + + ++++ IA+ G SGA++ +C A A+R+
Sbjct: 330 PDEKARADILKIHSRKMNLMRGINMAKIAEQIPGASGAEVKSVCTEAGMFALRE 383
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 42.7 bits (96), Expect = 2e-04
Identities = 19/63 (30%), Positives = 35/63 (55%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEI 518
P+E +R I++ + RK + KDV+ +A+ T F+GA +C A +A+R+ +
Sbjct: 348 PNEDARARIMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEIL 407
Query: 517 HRE 509
H +
Sbjct: 408 HED 410
>U53149-2|AAM29664.1| 451|Caenorhabditis elegans Hypothetical
protein C24B5.2a protein.
Length = 451
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDV---DLSYIAKVTQGFSGADLTEICQRACKLAIRQ 536
PDE++R+ ++ L+K + + D+ YIA T GFS +DL +C+ A + IR+
Sbjct: 345 PDEEARKELITKTLKKHNMMDGLISSDIRYIASNTSGFSNSDLVALCKEAAMVPIRE 401
>AF024493-9|AAV58871.1| 398|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform b
protein.
Length = 398
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEI 518
P+E+SR IL+ + K ++D + K++ GFS ADL +C A AIR E I
Sbjct: 313 PNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVI 372
Query: 517 HRE 509
+
Sbjct: 373 DED 375
>AF024493-8|AAB70326.2| 406|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 4, isoform a
protein.
Length = 406
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQAIEAEI 518
P+E+SR IL+ + K ++D + K++ GFS ADL +C A AIR E I
Sbjct: 321 PNEQSRLEILKIHSNKITKHGEIDFEAVVKLSDGFSAADLRNVCTEAGMFAIRAEREFVI 380
Query: 517 HRE 509
+
Sbjct: 381 DED 383
>Z69664-3|CAC42312.1| 339|Caenorhabditis elegans Hypothetical
protein K04D7.2b protein.
Length = 339
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRA 557
P+ K R IL LR I V+L IA+ +G SG+DL E+C+ A
Sbjct: 247 PNAKQRSQILNVILRNEKINNTVNLGEIAQAAEGLSGSDLKEVCRLA 293
>Z69664-2|CAA93516.2| 342|Caenorhabditis elegans Hypothetical
protein K04D7.2a protein.
Length = 342
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRA 557
P+ K R IL LR I V+L IA+ +G SG+DL E+C+ A
Sbjct: 250 PNAKQRSQILNVILRNEKINNTVNLGEIAQAAEGLSGSDLKEVCRLA 296
>AF099922-3|AAK21407.2| 411|Caenorhabditis elegans Hypothetical
protein F56F11.4a protein.
Length = 411
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQ 536
PDEK+R IL+ + RK + + + + IA+ G SGA++ +C A A+R+
Sbjct: 325 PDEKARAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRE 378
>AF099922-2|AAM48537.1| 432|Caenorhabditis elegans Hypothetical
protein F56F11.4b protein.
Length = 432
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQ 536
PDEK+R IL+ + RK + + + + IA+ G SGA++ +C A A+R+
Sbjct: 346 PDEKARAQILKIHSRKMNLMRGIRMDKIAEQIPGASGAEVKSVCTEAGMFALRE 399
>Z75712-1|CAB00040.1| 724|Caenorhabditis elegans Hypothetical
protein K04G2.3 protein.
Length = 724
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDV-DLSYIAKVTQGFSGADLTEICQRACKLAIRQAIEAE 521
P E +R AIL +K V + + + T G+SGA+L +C+ A A+R++I+A
Sbjct: 628 PCEVTRRAILEMRTKKMKFDDTVRTIDKLVEKTSGYSGAELVAVCRTAAMFAMRESIDAT 687
Query: 520 I 518
I
Sbjct: 688 I 688
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Frame = -3
Query: 697 PDEKSREAILRANLR--KSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQA 533
PD K R +I R +L ++ + K V +A T GFSGAD++ +C A +A R A
Sbjct: 465 PDIKGRASIFRVHLGPLRTSLDKTVLSRKLAAHTPGFSGADISNVCNEAALIAARDA 521
>Z75713-7|CAD56596.1| 475|Caenorhabditis elegans Hypothetical
protein T01G9.5b protein.
Length = 475
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/54 (27%), Positives = 33/54 (61%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQ 536
PD +R+ ++ ++ +P + +++ +A T+GFSGAD+ +C+ A +R+
Sbjct: 362 PDIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSGADVVSLCRTAAINVLRR 415
>Z75713-6|CAB00052.1| 472|Caenorhabditis elegans Hypothetical
protein T01G9.5a protein.
Length = 472
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/54 (27%), Positives = 33/54 (61%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQ 536
PD +R+ ++ ++ +P + +++ +A T+GFSGAD+ +C+ A +R+
Sbjct: 362 PDIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSGADVVSLCRTAAINVLRR 415
>L25423-1|AAA28109.1| 472|Caenorhabditis elegans mei-1 protein.
Length = 472
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/54 (27%), Positives = 33/54 (61%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQ 536
PD +R+ ++ ++ +P + +++ +A T+GFSGAD+ +C+ A +R+
Sbjct: 362 PDIDARKKLIEKSMEGTPKSDEINYDDLAARTEGFSGADVVSLCRTAAINVLRR 415
>AF016440-3|AAB65906.1| 443|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 2 protein.
Length = 443
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/54 (31%), Positives = 29/54 (53%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQ 536
PDEK++ I + + + + K+V+L SGAD+ +C A LA+R+
Sbjct: 359 PDEKTKRRIFQIHTSRMTLGKEVNLEEFITAKDELSGADIKAMCTEAGLLALRE 412
>Z96100-7|CAB09531.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Frame = -3
Query: 697 PDEKSREAILR---ANLRK-SPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQAI 530
PDE R IL+ A +R+ + + +VDL I+K T+ FSGA+L + + A A+ + +
Sbjct: 475 PDETGRLQILKIHTARMREYNKMDPNVDLEDISKRTKNFSGAELEGLVRAAQSSAMNRLV 534
Query: 529 EA 524
+A
Sbjct: 535 KA 536
>Z79698-2|CAB01976.1| 824|Caenorhabditis elegans Hypothetical
protein H15N14.2a protein.
Length = 824
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Frame = -3
Query: 697 PDEKSREAILR---ANLRK-SPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQAI 530
PDE R IL+ A +R+ + + +VDL I+K T+ FSGA+L + + A A+ + +
Sbjct: 475 PDETGRLQILKIHTARMREYNKMDPNVDLEDISKRTKNFSGAELEGLVRAAQSSAMNRLV 534
Query: 529 EA 524
+A
Sbjct: 535 KA 536
>Z79698-1|CAL44963.1| 758|Caenorhabditis elegans Hypothetical
protein H15N14.2b protein.
Length = 758
Score = 33.5 bits (73), Expect = 0.15
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Frame = -3
Query: 697 PDEKSREAILR---ANLRK-SPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQAI 530
PDE R IL+ A +R+ + + +VDL I+K T+ FSGA+L + + A A+ + +
Sbjct: 409 PDETGRLQILKIHTARMREYNKMDPNVDLEDISKRTKNFSGAELEGLVRAAQSSAMNRLV 468
Query: 529 EA 524
+A
Sbjct: 469 KA 470
>Z78012-4|CAB01414.1| 435|Caenorhabditis elegans Hypothetical
protein C52E4.4 protein.
Length = 435
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIR 539
PD R IL+ + ++ + +D+ +A++ +GA++ +C A AIR
Sbjct: 348 PDLAGRAHILKIHAKQMSVERDIRYDLLARLCPNSTGAEIRSVCTEAGMFAIR 400
>U88170-1|AAB42248.2| 438|Caenorhabditis elegans Hypothetical
protein C10G11.8 protein.
Length = 438
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIR 539
PDEK+R+ I + I K V + + SGA++ +C A LA+R
Sbjct: 354 PDEKTRQKIFTIHTSGMTIQKAVTYENVLGKEKSISGAEIKAVCTEAGMLALR 406
>U12965-4|AAA20608.1| 414|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 3 protein.
Length = 414
Score = 33.5 bits (73), Expect = 0.15
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQ 536
PD + + + + ++ DVDL SGAD+ ICQ A A+R+
Sbjct: 332 PDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRE 385
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -1
Query: 486 RCRYGHGRGRPVPEISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQ 346
+C YG G+ + +I ++ EE + R+ D + +K E +QTLQ
Sbjct: 453 KCDYGEGQSSAMVKIEQSDVEEELMKHRKDAED-EYQKEEQKSQTLQ 498
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -1
Query: 486 RCRYGHGRGRPVPEISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQ 346
+C YG G+ + +I ++ EE + R+ D + +K E +QTLQ
Sbjct: 453 KCDYGEGQSSAMVKIEQSDVEEELMKHRKDAED-EYQKEEQKSQTLQ 498
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -1
Query: 486 RCRYGHGRGRPVPEISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQ 346
+C YG G+ + +I ++ EE + R+ D + +K E +QTLQ
Sbjct: 453 KCDYGEGQSSAMVKIEQSDVEEELMKHRKDAED-EYQKEEQKSQTLQ 498
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -1
Query: 486 RCRYGHGRGRPVPEISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQ 346
+C YG G+ + +I ++ EE + R+ D + +K E +QTLQ
Sbjct: 453 KCDYGEGQSSAMVKIEQSDVEEELMKHRKDAED-EYQKEEQKSQTLQ 498
>Z49128-5|CAA88955.1| 676|Caenorhabditis elegans Hypothetical
protein M03C11.5 protein.
Length = 676
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTE-ICQRACKLAIRQAIE 527
PD R I L K + +D +AK + GF+GAD+ + Q A K A A+E
Sbjct: 369 PDLAGRVDIFNFYLSKIVHSGGIDPKVLAKGSTGFTGADIENMVNQAALKAATDNAVE 426
>AC024838-1|AAF60824.1| 1100|Caenorhabditis elegans Hypothetical
protein Y59E9AL.4 protein.
Length = 1100
Score = 29.5 bits (63), Expect = 2.4
Identities = 20/48 (41%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = -1
Query: 537 RPSRRRSIARESPAASRRCRYGHGRGRPVPEISRAHFEEAM--KFARR 400
R +RR + R SRR R G GRGR E + F+EA F+RR
Sbjct: 1049 RQQKRRKVLRNQNL-SRRRRIGGGRGRKCAENLPSTFQEARFEDFSRR 1095
>AF016427-1|AAB65351.1| 594|Caenorhabditis elegans Hypothetical
protein F32D1.1 protein.
Length = 594
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 628 DLSYIAKVTQGFSGADLTEICQRACKLAIR 539
+L I ++T G+SGAD+ ++C A IR
Sbjct: 507 NLERIRELTDGYSGADMRQLCTEAAMGPIR 536
>Z70205-8|CAO78730.1| 270|Caenorhabditis elegans Hypothetical
protein C11H1.4b protein.
Length = 270
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQAIEAE 521
P++ R I++ K DVD +A+ T G+SGADL + A RQ + E
Sbjct: 171 PEKTERLDIMKVLTNKLK-PTDVDFECLAQKTDGWSGADLQLLFTNAQFYNARQIAKEE 228
>Z70205-7|CAA94120.2| 996|Caenorhabditis elegans Hypothetical protein
C11H1.4a protein.
Length = 996
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQAIEAE 521
P++ R I++ K DVD +A+ T G+SGADL + A RQ + E
Sbjct: 897 PEKTERLDIMKVLTNKLK-PTDVDFECLAQKTDGWSGADLQLLFTNAQFYNARQIAKEE 954
>AB054992-1|BAB62002.1| 996|Caenorhabditis elegans peroxin protein.
Length = 996
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = -3
Query: 697 PDEKSREAILRANLRKSPIAKDVDLSYIAKVTQGFSGADLTEICQRACKLAIRQAIEAE 521
P++ R I++ K DVD +A+ T G+SGADL + A RQ + E
Sbjct: 897 PEKTERLDIMKVLTNKLK-PTDVDFECLAQKTDGWSGADLQLLFTNAQFYNARQIAKEE 954
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,146,406
Number of Sequences: 27780
Number of extensions: 313566
Number of successful extensions: 921
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 859
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 921
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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