Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0963.Seq
         (616 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058443-1|AAL13672.1|  477|Drosophila melanogaster GH22740p pro...    85   9e-17
AE014134-929|AAF52257.1|  477|Drosophila melanogaster CG7277-PA ...    85   9e-17
AY089366-1|AAL90104.1|  262|Drosophila melanogaster AT18808p pro...    30   2.2  
AE014298-2898|AAF48989.1|  262|Drosophila melanogaster CG14212-P...    30   2.2  
BT025157-1|ABE73327.1|  180|Drosophila melanogaster IP02071p pro...    30   2.9  
AE014134-1936|AAF52995.1|  413|Drosophila melanogaster CG17116-P...    30   2.9  

>AY058443-1|AAL13672.1|  477|Drosophila melanogaster GH22740p
           protein.
          Length = 477

 Score = 84.6 bits (200), Expect = 9e-17
 Identities = 42/95 (44%), Positives = 60/95 (63%)
 Frame = +3

Query: 9   YSNRVVALSQNTKSLMSSLNVWKHIEDMRLQPVKHMQVWDACSDALISFNSADNYNDDVA 188
           Y NRV A++ N+  L  S++ WKHIE  R +PVK MQVW++ +DALI F   DN+  DVA
Sbjct: 96  YQNRVSAINHNSIELFKSIDAWKHIESARYKPVKQMQVWESNTDALIQFQH-DNFASDVA 154

Query: 189 YIVENDVLLHAVNTELNNTDNKTLILSMKQRLQII 293
            I+END++L AV      + N  ++   K R+Q +
Sbjct: 155 CIIENDLILDAVYALAKESPNVEIL--NKARIQCV 187



 Score = 81.4 bits (192), Expect = 9e-16
 Identities = 43/90 (47%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
 Frame = +2

Query: 254 NFNIVYEAKIADYTLPNSEEVNPKSLVKMNNGDTYSCQLLIGADGANSAVRRAMGVQYLS 433
           N  I+ +A+I    LP     N   L ++ +G  +SC LLIGADGANS VR+ M V   S
Sbjct: 175 NVEILNKARIQCVRLPRDSNSNHSEL-QLEDGRNFSCDLLIGADGANSVVRKEMNVDVFS 233

Query: 434 WNYDQMGVVATLYLAEET-DNTTAWQDGCP 520
            NYD+MG+VATL L E+  DN+ AWQ   P
Sbjct: 234 LNYDRMGLVATLELGEDACDNSVAWQRFLP 263



 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 21/36 (58%), Positives = 26/36 (72%)
 Frame = +1

Query: 508 RWLPSGPIAILPLDSHRSSLVWSTWEDNAKRLLKLP 615
           R+LP+GP+A+LPL    SSLVWST  + AK L  LP
Sbjct: 260 RFLPNGPVALLPLTDRLSSLVWSTTNEQAKMLQALP 295


>AE014134-929|AAF52257.1|  477|Drosophila melanogaster CG7277-PA
           protein.
          Length = 477

 Score = 84.6 bits (200), Expect = 9e-17
 Identities = 42/95 (44%), Positives = 60/95 (63%)
 Frame = +3

Query: 9   YSNRVVALSQNTKSLMSSLNVWKHIEDMRLQPVKHMQVWDACSDALISFNSADNYNDDVA 188
           Y NRV A++ N+  L  S++ WKHIE  R +PVK MQVW++ +DALI F   DN+  DVA
Sbjct: 96  YQNRVSAINHNSIELFKSIDAWKHIESARYKPVKQMQVWESNTDALIQFQH-DNFASDVA 154

Query: 189 YIVENDVLLHAVNTELNNTDNKTLILSMKQRLQII 293
            I+END++L AV      + N  ++   K R+Q +
Sbjct: 155 CIIENDLILDAVYALAKESPNVEIL--NKARIQCV 187



 Score = 81.4 bits (192), Expect = 9e-16
 Identities = 43/90 (47%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
 Frame = +2

Query: 254 NFNIVYEAKIADYTLPNSEEVNPKSLVKMNNGDTYSCQLLIGADGANSAVRRAMGVQYLS 433
           N  I+ +A+I    LP     N   L ++ +G  +SC LLIGADGANS VR+ M V   S
Sbjct: 175 NVEILNKARIQCVRLPRDSNSNHSEL-QLEDGRNFSCDLLIGADGANSVVRKEMNVDVFS 233

Query: 434 WNYDQMGVVATLYLAEET-DNTTAWQDGCP 520
            NYD+MG+VATL L E+  DN+ AWQ   P
Sbjct: 234 LNYDRMGLVATLELGEDACDNSVAWQRFLP 263



 Score = 47.6 bits (108), Expect = 1e-05
 Identities = 21/36 (58%), Positives = 26/36 (72%)
 Frame = +1

Query: 508 RWLPSGPIAILPLDSHRSSLVWSTWEDNAKRLLKLP 615
           R+LP+GP+A+LPL    SSLVWST  + AK L  LP
Sbjct: 260 RFLPNGPVALLPLTDRLSSLVWSTTNEQAKMLQALP 295


>AY089366-1|AAL90104.1|  262|Drosophila melanogaster AT18808p
           protein.
          Length = 262

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -1

Query: 598 VSRCLPTSTRRVSYDASPKAGWL 530
           VS+ LPTS R+   D  PK GWL
Sbjct: 50  VSQLLPTSQRKELQDQIPKCGWL 72


>AE014298-2898|AAF48989.1|  262|Drosophila melanogaster CG14212-PA
           protein.
          Length = 262

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -1

Query: 598 VSRCLPTSTRRVSYDASPKAGWL 530
           VS+ LPTS R+   D  PK GWL
Sbjct: 50  VSQLLPTSQRKELQDQIPKCGWL 72


>BT025157-1|ABE73327.1|  180|Drosophila melanogaster IP02071p
           protein.
          Length = 180

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +3

Query: 9   YSNRVVALSQNTKSLMSSLNVWKHIEDMRLQPVKHM-QVWDACSDALISFNSADN 170
           Y+ ++V  +QN K L+ + N    ++    + +KH+ Q+W +       F +A+N
Sbjct: 31  YAKQLVGSAQNNKKLLEAFNYEYLLQGGSPREIKHLQQIWKSGDFISYDFGTAEN 85


>AE014134-1936|AAF52995.1|  413|Drosophila melanogaster CG17116-PA
           protein.
          Length = 413

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
 Frame = +3

Query: 9   YSNRVVALSQNTKSLMSSLNVWKHIEDMRLQPVKHM-QVWDACSDALISFNSADN 170
           Y+ ++V  +QN K L+ + N    ++    + +KH+ Q+W +       F +A+N
Sbjct: 264 YAKQLVGSAQNNKKLLEAFNYEYLLQGGSPREIKHLQQIWKSGDFISYDFGTAEN 318


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,847,702
Number of Sequences: 53049
Number of extensions: 549614
Number of successful extensions: 1746
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1744
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)