Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0961X.Seq
         (477 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118466-1|AAM49835.1|  485|Drosophila melanogaster GM02932p pro...    74   9e-14
AE013599-989|AAF58861.1|  485|Drosophila melanogaster CG12128-PA...    74   9e-14

>AY118466-1|AAM49835.1|  485|Drosophila melanogaster GM02932p
           protein.
          Length = 485

 Score = 74.1 bits (174), Expect = 9e-14
 Identities = 40/85 (47%), Positives = 54/85 (63%)
 Frame = -3

Query: 256 QSWREIAKERKSLKRKRNEENIIKREKRVALXXXXXXXXXXXXXXXXXXXEISTVSIAVP 77
           +SW+++ +ERK+LKR+R ++ ++K E + A                      ST+SIAVP
Sbjct: 21  KSWKKVNEERKALKRQRKQDKLLK-ELQQAKEAESQAGKAANEVQAKDKPNPSTLSIAVP 79

Query: 76  SSILENAQSAELRTYLAGQIARAAC 2
            SILENAQS ELR Y+AGQIARAAC
Sbjct: 80  GSILENAQSNELRAYVAGQIARAAC 104


>AE013599-989|AAF58861.1|  485|Drosophila melanogaster CG12128-PA,
           isoform A protein.
          Length = 485

 Score = 74.1 bits (174), Expect = 9e-14
 Identities = 40/85 (47%), Positives = 54/85 (63%)
 Frame = -3

Query: 256 QSWREIAKERKSLKRKRNEENIIKREKRVALXXXXXXXXXXXXXXXXXXXEISTVSIAVP 77
           +SW+++ +ERK+LKR+R ++ ++K E + A                      ST+SIAVP
Sbjct: 21  KSWKKVNEERKALKRQRKQDKLLK-ELQQAKEAESQAGKAANEVQAKDKPNPSTLSIAVP 79

Query: 76  SSILENAQSAELRTYLAGQIARAAC 2
            SILENAQS ELR Y+AGQIARAAC
Sbjct: 80  GSILENAQSNELRAYVAGQIARAAC 104


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,987,641
Number of Sequences: 53049
Number of extensions: 242494
Number of successful extensions: 623
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1643002263
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)