Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0957.Seq
(711 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 150 2e-37
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 145 5e-36
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 131 1e-31
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 129 3e-31
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 116 3e-27
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 69 5e-13
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 60 4e-10
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 47 2e-06
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.21
SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyc... 29 0.87
SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 compon... 29 0.87
SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr ... 27 2.0
SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual 27 3.5
SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyc... 26 4.6
SPBC1826.01c |mot1||TATA-binding protein associated factor Mot1|... 26 6.1
SPAC105.01c |||potassium ion/proton antiporter|Schizosaccharomyc... 25 8.1
SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor Cwf22|Schizosacch... 25 8.1
SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex al... 25 8.1
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 25 8.1
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 150 bits (363), Expect = 2e-37
Identities = 67/86 (77%), Positives = 77/86 (89%)
Frame = +1
Query: 256 DKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEF 435
D+ GE NVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNHF+QEF
Sbjct: 184 DRSNQGESNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFIQEF 243
Query: 436 KRKYKKDLATNKRALRRLRTACERER 513
KRK KKD+ N RA+RRLRTACER +
Sbjct: 244 KRKNKKDITGNARAVRRLRTACERAK 269
Score = 126 bits (305), Expect = 2e-30
Identities = 63/78 (80%), Positives = 70/78 (89%), Gaps = 1/78 (1%)
Frame = +2
Query: 32 KTKPF-PEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNV 208
+TK F PEE+SSMVL KM+ETAEAYLG V +AV+TVPAYFNDSQRQATKDAG I+GLNV
Sbjct: 108 ETKTFTPEEISSMVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNV 167
Query: 209 LRIINEPTAAAIAYGLTK 262
LRIINEPTAAAIAYGL +
Sbjct: 168 LRIINEPTAAAIAYGLDR 185
Score = 66.5 bits (155), Expect = 4e-12
Identities = 31/41 (75%), Positives = 37/41 (90%)
Frame = +2
Query: 587 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLV 709
ITRARFEEL ADLFR TMEPVE+ LRD+K+DKA +++IVLV
Sbjct: 295 ITRARFEELCADLFRKTMEPVERVLRDSKVDKASVNEIVLV 335
Score = 53.2 bits (122), Expect = 4e-08
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +3
Query: 510 KRTLSSSTQASIEIDSLFEGIDFYTSL 590
KRTLSSS QASIEIDSLFEGIDFYTS+
Sbjct: 269 KRTLSSSAQASIEIDSLFEGIDFYTSI 295
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +1
Query: 1 KPKIKVAYKGEDKTF 45
KP ++V YKGE KTF
Sbjct: 98 KPVLQVEYKGETKTF 112
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 145 bits (352), Expect = 5e-36
Identities = 66/86 (76%), Positives = 75/86 (87%)
Frame = +1
Query: 256 DKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEF 435
D+ E NVLIFDLGGGTFDVS+LTIE+GIFEVK+TAGDTHLGGEDFD+R+VNHF QEF
Sbjct: 184 DRSNQHETNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDSRLVNHFAQEF 243
Query: 436 KRKYKKDLATNKRALRRLRTACERER 513
KRK KKD+ N RA+RRLRTACER +
Sbjct: 244 KRKNKKDITGNARAVRRLRTACERAK 269
Score = 123 bits (297), Expect = 2e-29
Identities = 61/78 (78%), Positives = 70/78 (89%), Gaps = 1/78 (1%)
Frame = +2
Query: 32 KTKPF-PEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNV 208
+TK F PEE+SSMVL KM+E+AEA+LG V +AV+TVPAYFNDSQRQATKDAG I+GLNV
Sbjct: 108 ETKTFTPEEISSMVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNV 167
Query: 209 LRIINEPTAAAIAYGLTK 262
LRIINEPTAAAIAYGL +
Sbjct: 168 LRIINEPTAAAIAYGLDR 185
Score = 66.9 bits (156), Expect = 3e-12
Identities = 31/41 (75%), Positives = 38/41 (92%)
Frame = +2
Query: 587 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLV 709
ITRARFEEL ADLFR+TMEPVEK LRD+K+DK+ +++IVLV
Sbjct: 295 ITRARFEELCADLFRNTMEPVEKVLRDSKIDKSSVNEIVLV 335
Score = 52.0 bits (119), Expect = 8e-08
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +3
Query: 510 KRTLSSSTQASIEIDSLFEGIDFYTSL 590
KRTLSSS QASIEIDSL+EGIDFYTS+
Sbjct: 269 KRTLSSSAQASIEIDSLYEGIDFYTSI 295
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 131 bits (316), Expect = 1e-31
Identities = 59/86 (68%), Positives = 71/86 (82%)
Frame = +1
Query: 256 DKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEF 435
D K +NVLIFDLGGGTFDVS+L I+ G+FEV +TAGDTHLGGEDFDN +V HF+QEF
Sbjct: 188 DAKSDKPKNVLIFDLGGGTFDVSLLKIQGGVFEVLATAGDTHLGGEDFDNALVEHFIQEF 247
Query: 436 KRKYKKDLATNKRALRRLRTACERER 513
KRK K D++ + RALRRLR+ACER +
Sbjct: 248 KRKQKIDISDDPRALRRLRSACERAK 273
Score = 113 bits (271), Expect = 3e-26
Identities = 55/69 (79%), Positives = 62/69 (89%)
Frame = +2
Query: 50 EEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEP 229
+E+S+MVLTKMKE +EA L K V+ AVITVPAYF+DSQR ATKDAG I+GLNVLRIINEP
Sbjct: 119 QEISAMVLTKMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIINEP 178
Query: 230 TAAAIAYGL 256
TAAAIAYGL
Sbjct: 179 TAAAIAYGL 187
Score = 58.8 bits (136), Expect = 7e-10
Identities = 25/41 (60%), Positives = 35/41 (85%)
Frame = +2
Query: 587 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLV 709
ITRARFE++NA F++T++PV K L+D+K+ KA +HDIVLV
Sbjct: 299 ITRARFEDINATTFKATIDPVAKVLKDSKVPKADVHDIVLV 339
Score = 36.7 bits (81), Expect = 0.003
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +3
Query: 510 KRTLSSSTQASIEIDSLFEGIDFYTSL 590
KR LSS TQ ++E+DSL GIDF +S+
Sbjct: 273 KRALSSVTQTTVEVDSLSNGIDFSSSI 299
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 129 bits (312), Expect = 3e-31
Identities = 61/84 (72%), Positives = 73/84 (86%)
Frame = +2
Query: 32 KTKPFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVL 211
K K PEE+S+M+L+KMK+TAEAYLGK V +AV+TVPAYFND+QRQATKDAGTI+GLNV+
Sbjct: 142 KKKFTPEEISAMILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVI 201
Query: 212 RIINEPTAAAIAYGLTKRVLENEM 283
RI+NEPTAAAIAYGL K E +
Sbjct: 202 RIVNEPTAAAIAYGLDKTDTEKHI 225
Score = 99.5 bits (237), Expect = 4e-22
Identities = 41/86 (47%), Positives = 67/86 (77%)
Frame = +1
Query: 256 DKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEF 435
DK T E++++++DLGGGTFDVS+L+I++G+FEV +T+GDTHLGGEDFDNR++N+ + +
Sbjct: 217 DKTDT-EKHIVVYDLGGGTFDVSLLSIDNGVFEVLATSGDTHLGGEDFDNRVINYLARTY 275
Query: 436 KRKYKKDLATNKRALRRLRTACERER 513
RK D+ + +A+ +L+ E+ +
Sbjct: 276 NRKNNVDVTKDLKAMGKLKREVEKAK 301
Score = 54.4 bits (125), Expect = 2e-08
Identities = 22/41 (53%), Positives = 35/41 (85%)
Frame = +2
Query: 587 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLV 709
++RA+FEE+N DLF+ T++PVE+ L+D+ + K++I DIVLV
Sbjct: 327 LSRAKFEEINMDLFKKTLKPVEQVLKDSNLKKSEIDDIVLV 367
Score = 31.5 bits (68), Expect = 0.12
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +3
Query: 504 EGKRTLSSSTQASIEIDSLFEGIDFYTSL 590
+ KRTLSS IEI+S F G DF +L
Sbjct: 299 KAKRTLSSQKSVRIEIESFFNGQDFSETL 327
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 116 bits (279), Expect = 3e-27
Identities = 51/73 (69%), Positives = 63/73 (86%)
Frame = +2
Query: 47 PEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINE 226
P ++ +L+KM+ETA YLGK V+NAV+TVPAYFNDSQRQATK AG I+GLNVLR++NE
Sbjct: 160 PSQIGGFILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGAIAGLNVLRVVNE 219
Query: 227 PTAAAIAYGLTKR 265
PTAAA+AYGL K+
Sbjct: 220 PTAAALAYGLDKK 232
Score = 98.3 bits (234), Expect = 9e-22
Identities = 45/86 (52%), Positives = 63/86 (73%)
Frame = +1
Query: 256 DKKGTGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEF 435
DKK + V +FDLGGGTFD+SIL + +G+FEV+ST GDTHLGGEDFD +V H V+ F
Sbjct: 230 DKKN--DAIVAVFDLGGGTFDISILELNNGVFEVRSTNGDTHLGGEDFDVALVRHIVETF 287
Query: 436 KRKYKKDLATNKRALRRLRTACERER 513
K+ DL+ ++ A++R+R A E+ +
Sbjct: 288 KKNEGLDLSKDRLAVQRIREAAEKAK 313
Score = 40.7 bits (91), Expect = 2e-04
Identities = 16/41 (39%), Positives = 32/41 (78%)
Frame = +2
Query: 587 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLV 709
I+RA+FE+L L R T++P +++L+DA + ++I++++LV
Sbjct: 343 ISRAQFEKLVDPLVRRTIDPCKRALKDANLQTSEINEVILV 383
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 69.3 bits (162), Expect = 5e-13
Identities = 33/77 (42%), Positives = 45/77 (58%)
Frame = +1
Query: 277 RNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKKD 456
R V I D G + VSI+ G F +KST D +LG + D ++++F EFK KYK D
Sbjct: 199 RRVAIVDFGHSNYSVSIVEFSRGQFHIKSTVCDRNLGSRNMDKALIDYFAAEFKEKYKID 258
Query: 457 LATNKRALRRLRTACER 507
+ +N +A RL TA ER
Sbjct: 259 VLSNPKATFRLATAVER 275
Score = 67.7 bits (158), Expect = 2e-12
Identities = 32/63 (50%), Positives = 46/63 (73%)
Frame = +2
Query: 74 TKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYG 253
TK+K AEA L +V + VI++PA+F D QR+A +A I+GLN LR++N+ AAA+ YG
Sbjct: 127 TKIKAIAEAELIGSVSDVVISIPAWFTDIQRRALLEAANIAGLNPLRLMNDNAAAALTYG 186
Query: 254 LTK 262
+TK
Sbjct: 187 ITK 189
Score = 28.7 bits (61), Expect = 0.87
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 587 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVLV 709
I R+ FEEL L P+EK+L A + K ++ I +V
Sbjct: 303 IKRSDFEELIKPLLERLTPPIEKALELAGIKKEDLYSIEMV 343
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 59.7 bits (138), Expect = 4e-10
Identities = 29/73 (39%), Positives = 46/73 (63%)
Frame = +2
Query: 53 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPT 232
E S L ++ E+AE +LG V V++VP YF D+QR+A + A +GL VL++I++P
Sbjct: 142 EASVRHLRRLTESAEDFLGTKVNGCVMSVPVYFTDAQRKALESAANEAGLPVLQLIHDPA 201
Query: 233 AAAIAYGLTKRVL 271
A +A ++ VL
Sbjct: 202 AVILALMYSEEVL 214
Score = 56.8 bits (131), Expect = 3e-09
Identities = 24/77 (31%), Positives = 47/77 (61%)
Frame = +1
Query: 274 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKK 453
++ V++ + G +VS+++++ G+ + ++ D +LGGE + +VN F +EF++K
Sbjct: 216 DKTVVVANFGATRSEVSVVSVKGGLMTILASVHDENLGGEQLTDVLVNFFAKEFEKKNGI 275
Query: 454 DLATNKRALRRLRTACE 504
D N R+L +LR CE
Sbjct: 276 DPRKNARSLAKLRAQCE 292
Score = 35.1 bits (77), Expect = 0.010
Identities = 15/27 (55%), Positives = 21/27 (77%)
Frame = +3
Query: 510 KRTLSSSTQASIEIDSLFEGIDFYTSL 590
KR LS+ T AS +DSL +GIDF++S+
Sbjct: 295 KRVLSNGTTASAAVDSLADGIDFHSSI 321
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 47.2 bits (107), Expect = 2e-06
Identities = 27/96 (28%), Positives = 48/96 (50%)
Frame = +2
Query: 50 EEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEP 229
EE+ +M + AE + + + V+TVP +FN+ QR +A I +VL +I++
Sbjct: 138 EEIIAMTMEHYISLAEEMAHEKITDLVLTVPPHFNELQRSILLEAARILNKHVLALIDDN 197
Query: 230 TAAAIAYGLTKRVLENEMYLSLTSAAVPSTCPSLPS 337
A AI Y L++ + Y + + ST ++ S
Sbjct: 198 VAVAIEYSLSRSFSTDPTYNIIYDSGSGSTSATVIS 233
Score = 31.9 bits (69), Expect = 0.093
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +2
Query: 587 ITRARFEELNADLFRSTMEPVEKSLRDAKMDKAQIHDIVL 706
ITR+ E L D+ + +EP+ K+L+ A + ++I+ I+L
Sbjct: 331 ITRSVLESLCKDMEDAAVEPINKALKKANLTFSEINSIIL 370
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 30.7 bits (66), Expect = 0.21
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = -2
Query: 401 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSDRKQS 240
+ S PP P + IP PPPRS ST R P P S R S
Sbjct: 333 NSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVS 386
>SPBC2D10.17 |clr1||cryptic loci regulator Clr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1238
Score = 28.7 bits (61), Expect = 0.87
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -2
Query: 401 SKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPPPRSK 291
+KSSP K VSP V SK +S V + S +P +K
Sbjct: 203 NKSSPVKHVSPNVKNNSKKTASSVNSNHSSIPSSITK 239
>SPBC776.15c |||dihydrolipoamide S-succinyltransferase, e2 component
of oxoglutarate dehydrogenase complex
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 28.7 bits (61), Expect = 0.87
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 8/121 (6%)
Frame = +2
Query: 26 RVKTKPFPEEVSSMVLTKMKETAEAYLGK-----TVQNAVITVPAYFNDS---QRQATKD 181
R+KT PFPE ++ L + + Y+ K +V+ I P D+ + Q K+
Sbjct: 44 RIKTPPFPESITEGTLAQWLKQPGEYVNKDEEIASVETDKIDAPVTAPDAGVLKEQLVKE 103
Query: 182 AGTISGLNVLRIINEPTAAAIAYGLTKRVLENEMYLSLTSAAVPSTCPSLPSRMVSSR*N 361
TI+ + +I+ T+AA G + ++E+ + AA + P S+ + +
Sbjct: 104 GDTITIDQDIAVID--TSAAPPEGGSAGPKKDEVKTADADAAKDLSTPQDSSKPIEEKPM 161
Query: 362 P 364
P
Sbjct: 162 P 162
>SPCC320.09 |hem15||ferrochelatase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 384
Score = 27.5 bits (58), Expect = 2.0
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -2
Query: 437 LNSWTKWLTMRLSKSSPPKWVSPAVDFTSKIPSSMVRMDTSKVPP--PRSKISTFRSPVP 264
LN K++ SK P W+SPA DF + + + + VP I T +
Sbjct: 256 LNYKNKFVNAWQSKVGPLPWMSPATDFVIEQLGNRGQKNMILVPIAFTSDHIETLKELED 315
Query: 263 FLSDRKQ 243
++ D KQ
Sbjct: 316 YIEDAKQ 322
>SPAC7D4.02c |||src |Schizosaccharomyces pombe|chr 1|||Manual
Length = 415
Score = 26.6 bits (56), Expect = 3.5
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 344 PSSMVRMDTSKV-PPPRSKISTFRSPVPFLSDRKQS 240
PS+ T ++ PPP I T R+PV L D+K+S
Sbjct: 301 PSNQATASTLQLAPPPVQAIPTLRNPVN-LDDKKES 335
>SPCC70.05c |||serine/threonine protein kinase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 781
Score = 26.2 bits (55), Expect = 4.6
Identities = 12/50 (24%), Positives = 22/50 (44%)
Frame = -2
Query: 377 VSPAVDFTSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLSDRKQSQQQS 228
V+ D + +P + + T + PPR K + +P+P + R S
Sbjct: 71 VNHTTDSMAHVPGNNSPLQTPQKSPPRQKHTAPATPIPVSASRHHKPHHS 120
>SPBC1826.01c |mot1||TATA-binding protein associated factor
Mot1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1953
Score = 25.8 bits (54), Expect = 6.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -2
Query: 296 SKISTFRSPVPFLSDRKQSQQQSVH 222
SK+ F PVP +D ++ QQ+ V+
Sbjct: 1343 SKVEAFSIPVPISADLRKYQQEGVN 1367
>SPAC105.01c |||potassium ion/proton antiporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 898
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -3
Query: 688 LSLIHLGITERLLNWLHGRPEQIGVQLLEASTSNDV 581
+S+ + R+L+ LH +++GV +L A NDV
Sbjct: 167 MSITAFPVLARILSELHLLHKRVGVIVLSAGIGNDV 202
>SPBC13E7.01 |cwf22|SPBC15D4.16|splicing factor
Cwf22|Schizosaccharomyces pombe|chr 2|||Manual
Length = 834
Score = 25.4 bits (53), Expect = 8.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 660 RDFSTGSMVDLNRSAFSSSKRARVMTCRSQYPQREN 553
+ F G M+D NR SS +RV R Q ++EN
Sbjct: 6 KSFGIG-MLDYNRENPESSGHSRVAVIRKQKTEQEN 40
>SPBC25H2.05 |egd2|nac1|nascent polypeptide-associated complex alpha
subunit Egd2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 25.4 bits (53), Expect = 8.1
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +2
Query: 56 VSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATK 178
++ ++ K A LGK + FN+SQ+QAT+
Sbjct: 57 INEPIVYKSSNNAYIVLGKVTVEDMAAQARAFNESQKQATE 97
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 25.4 bits (53), Expect = 8.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 305 AVPSTCPSLPSRMVSSR*NPPPATPTW 385
++PST P++PS +S + PP T ++
Sbjct: 299 SIPSTIPTIPSAYSASVSSQPPLTHSY 325
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,095,166
Number of Sequences: 5004
Number of extensions: 64897
Number of successful extensions: 269
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 269
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 331187010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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