Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0956X.Seq
         (535 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021447-2|CAA16273.2|  807|Caenorhabditis elegans Hypothetical ...    32   0.30 
Z11505-5|CAA77589.1|  435|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical pr...    28   3.7  
Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical pr...    28   3.7  
Z70753-5|CAB54240.1|  910|Caenorhabditis elegans Hypothetical pr...    28   3.7  
Z70753-4|CAA94764.1|  924|Caenorhabditis elegans Hypothetical pr...    28   3.7  
AF130407-1|AAD42308.1|  632|Caenorhabditis elegans phophoinositi...    28   3.7  
AF130406-1|AAD42307.1|  636|Caenorhabditis elegans phophoinositi...    28   3.7  
AF026207-4|AAK82904.1|  632|Caenorhabditis elegans Pdk-class pro...    28   3.7  
AF026207-3|AAK82905.1|  636|Caenorhabditis elegans Pdk-class pro...    28   3.7  
U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical pr...    27   6.4  
AF003150-4|AAB54217.1|  381|Caenorhabditis elegans Hypothetical ...    27   6.4  

>AL021447-2|CAA16273.2|  807|Caenorhabditis elegans Hypothetical
           protein F19B2.6 protein.
          Length = 807

 Score = 31.9 bits (69), Expect = 0.30
 Identities = 16/68 (23%), Positives = 34/68 (50%)
 Frame = +1

Query: 322 DDEFNEDITESLKRLRASKKTSRFADDIDFENSVTNLENRMRISDKILESVGIGHSEVSS 501
           DD  ++   E +      KKT R  + ++   S+   ++ ++ S K  E V I H+ + S
Sbjct: 533 DDSMSQTSQEPVSVESIRKKTKRAKNKLEARKSLQKKKDDLKASRKSWEEVKINHNNILS 592

Query: 502 AKSALQDN 525
           + ++ ++N
Sbjct: 593 SNNSNEEN 600


>Z11505-5|CAA77589.1|  435|Caenorhabditis elegans Hypothetical
           protein F59B2.8 protein.
          Length = 435

 Score = 29.9 bits (64), Expect = 1.2
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = +2

Query: 32  IVKGYRKQSKMSRVGRTRRTRVYDCNYN 115
           I++G   + ++S +GR RR R++D  YN
Sbjct: 401 ILRGMDSEVRLSSIGRVRRRRIFDEMYN 428


>Z81483-8|CAB03966.2| 1776|Caenorhabditis elegans Hypothetical protein
            C14B4.2 protein.
          Length = 1776

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 17/65 (26%), Positives = 34/65 (52%)
 Frame = +1

Query: 322  DDEFNEDITESLKRLRASKKTSRFADDIDFENSVTNLENRMRISDKILESVGIGHSEVSS 501
            +DE   +   S+K L  SK+ ++    I  + S+    NR+ ++ + ++++ I    V S
Sbjct: 919  NDEGLMESKNSMKLLAVSKEWTKLGGSIKAKKSMDLCANRLNVAIRNVQNLSIDKRLVFS 978

Query: 502  AKSAL 516
            AK+ L
Sbjct: 979  AKTDL 983


>Z81471-1|CAB03887.2| 1776|Caenorhabditis elegans Hypothetical protein
            C14B4.2 protein.
          Length = 1776

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 17/65 (26%), Positives = 34/65 (52%)
 Frame = +1

Query: 322  DDEFNEDITESLKRLRASKKTSRFADDIDFENSVTNLENRMRISDKILESVGIGHSEVSS 501
            +DE   +   S+K L  SK+ ++    I  + S+    NR+ ++ + ++++ I    V S
Sbjct: 919  NDEGLMESKNSMKLLAVSKEWTKLGGSIKAKKSMDLCANRLNVAIRNVQNLSIDKRLVFS 978

Query: 502  AKSAL 516
            AK+ L
Sbjct: 979  AKTDL 983


>Z70753-5|CAB54240.1|  910|Caenorhabditis elegans Hypothetical
           protein F40F9.6b protein.
          Length = 910

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 12/30 (40%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
 Frame = -2

Query: 519 LQSTLGAAD-FRVTNPDAFEYFVRNPHSVF 433
           L++T+G +D +R+ N D FEY + NP +++
Sbjct: 226 LRNTVGNSDPYRLYNLDVFEYELNNPMALY 255


>Z70753-4|CAA94764.1|  924|Caenorhabditis elegans Hypothetical
           protein F40F9.6a protein.
          Length = 924

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 12/30 (40%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
 Frame = -2

Query: 519 LQSTLGAAD-FRVTNPDAFEYFVRNPHSVF 433
           L++T+G +D +R+ N D FEY + NP +++
Sbjct: 240 LRNTVGNSDPYRLYNLDVFEYELNNPMALY 269


>AF130407-1|AAD42308.1|  632|Caenorhabditis elegans
           phophoinositide-dependent proteinkinase 1b protein.
          Length = 632

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 465 EYFVRNPHSVFEIGDAVLKVDVVSEPRSLFARAQAF 358
           E  V+NP  +F     +LK   + + R LFAR + F
Sbjct: 460 EQRVKNPFHIFTNNSLILKQGYLEKKRGLFARRRMF 495


>AF130406-1|AAD42307.1|  636|Caenorhabditis elegans
           phophoinositide-dependent proteinkinase 1a protein.
          Length = 636

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 465 EYFVRNPHSVFEIGDAVLKVDVVSEPRSLFARAQAF 358
           E  V+NP  +F     +LK   + + R LFAR + F
Sbjct: 464 EQRVKNPFHIFTNNSLILKQGYLEKKRGLFARRRMF 499


>AF026207-4|AAK82904.1|  632|Caenorhabditis elegans Pdk-class
           protein kinase protein1, isoform a protein.
          Length = 632

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 465 EYFVRNPHSVFEIGDAVLKVDVVSEPRSLFARAQAF 358
           E  V+NP  +F     +LK   + + R LFAR + F
Sbjct: 460 EQRVKNPFHIFTNNSLILKQGYLEKKRGLFARRRMF 495


>AF026207-3|AAK82905.1|  636|Caenorhabditis elegans Pdk-class
           protein kinase protein1, isoform b protein.
          Length = 636

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 465 EYFVRNPHSVFEIGDAVLKVDVVSEPRSLFARAQAF 358
           E  V+NP  +F     +LK   + + R LFAR + F
Sbjct: 464 EQRVKNPFHIFTNNSLILKQGYLEKKRGLFARRRMF 499


>U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical
           protein C27A2.1 protein.
          Length = 1076

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 21/99 (21%), Positives = 40/99 (40%), Gaps = 5/99 (5%)
 Frame = +2

Query: 32  IVKGYRKQSKMSRVGRTRRTRVYDCNYNKGESYYRPVLDRLDGKAPIVREPER-----ES 196
           +V+ YRK+  +    R    ++    + K +  Y+  L  +DG     RE E+     E 
Sbjct: 217 LVENYRKKLALQSKLRLLEKKMKIMEFEKFDREYKAELQNMDGAMIEYREVEKSIAECEK 276

Query: 197 IRADVDNRIKSALHDMETPTMNCSTSEVHAPSAADLSLL 313
            R ++++RIK     +     +C+          D  L+
Sbjct: 277 HRKNLEDRIKKDRSQISQMQRSCNEILAKVQEKGDKKLM 315


>AF003150-4|AAB54217.1|  381|Caenorhabditis elegans Hypothetical
           protein T05E7.5 protein.
          Length = 381

 Score = 27.5 bits (58), Expect = 6.4
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 304 LSSALEDDEFNEDITESLKRLRASKKTSRFADDIDFENSVTNLE 435
           +SS     +  E +  + KRL A K+T +  +D D    VTN +
Sbjct: 338 VSSQTTSPKMKEHLASAKKRLSAIKETLQNEEDFDETGEVTNYQ 381


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,919,643
Number of Sequences: 27780
Number of extensions: 194236
Number of successful extensions: 748
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1060113800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)