Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0953X.Seq
         (398 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IK91 Cluster: Putative uncharacterized protein; n=1; ...    33   2.1  
UniRef50_UPI0000F2EACE Cluster: PREDICTED: similar to SMC6 prote...    32   4.8  
UniRef50_UPI00006CF83D Cluster: Protein kinase domain containing...    31   6.3  
UniRef50_A2R650 Cluster: Similarity: N-terminal half differs fro...    31   6.3  
UniRef50_P81684 Cluster: Extracellular matrix protein-binding pr...    31   6.3  
UniRef50_UPI00006CF389 Cluster: Kinesin motor domain containing ...    31   8.3  
UniRef50_A6QBB2 Cluster: Sensor protein; n=1; Sulfurovum sp. NBC...    31   8.3  
UniRef50_Q23B13 Cluster: Protein kinase domain containing protei...    31   8.3  
UniRef50_Q17EI1 Cluster: Putative uncharacterized protein; n=1; ...    31   8.3  

>UniRef50_Q8IK91 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 694

 Score = 33.1 bits (72), Expect = 2.1
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
 Frame = -1

Query: 329 LHYQEKRSSTCVIKNPLQEKVLLRTF-PHIFIR*LSKSKNNIASANQHYDYYEEKRT 162
           L Y EK      IKN L+E  L  ++   + I+   K KNNI++ N H +   E+++
Sbjct: 429 LEYDEKVKEIFFIKNNLRETFLFSSYNTTVHIQMFVKKKNNISNPNLHQNNLVEQKS 485


>UniRef50_UPI0000F2EACE Cluster: PREDICTED: similar to SMC6 protein;
           n=4; Monodelphis domestica|Rep: PREDICTED: similar to
           SMC6 protein - Monodelphis domestica
          Length = 1082

 Score = 31.9 bits (69), Expect = 4.8
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 383 QHAHTVIPDHRTSELVFTLHYQEKRSSTCVIKNPLQE 273
           QH HT+  D +T++     HYQ  R +   I N ++E
Sbjct: 684 QHVHTLATDMKTNQETMDSHYQNLRETRVQITNAMRE 720


>UniRef50_UPI00006CF83D Cluster: Protein kinase domain containing
           protein; n=1; Tetrahymena thermophila SB210|Rep: Protein
           kinase domain containing protein - Tetrahymena
           thermophila SB210
          Length = 946

 Score = 31.5 bits (68), Expect = 6.3
 Identities = 24/62 (38%), Positives = 29/62 (46%)
 Frame = -1

Query: 365 IPDHRTSELVFTLHYQEKRSSTCVIKNPLQEKVLLRTFPHIFIR*LSKSKNNIASANQHY 186
           IP     +L+F   Y  K   TC   NPLQ   +LRT  +I    LS   NNI   N+  
Sbjct: 835 IPIRLVLDLIFKASY--KMGRTCT--NPLQSSAILRTSLYIL---LSMLINNIFDKNKVK 887

Query: 185 DY 180
           DY
Sbjct: 888 DY 889


>UniRef50_A2R650 Cluster: Similarity: N-terminal half differs from all
            homologs; n=14; Pezizomycotina|Rep: Similarity:
            N-terminal half differs from all homologs - Aspergillus
            niger
          Length = 1362

 Score = 31.5 bits (68), Expect = 6.3
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +2

Query: 50   HFFWTIIDYFFLVSGKSWNLLDYVLKLYYYRCT 148
            HF WT  D F L+ G +W ++  +++    RCT
Sbjct: 1301 HFTWTSCDIFTLILGLAWTIVISLIEYCGSRCT 1333


>UniRef50_P81684 Cluster: Extracellular matrix protein-binding
           protein emp precursor; n=13; Staphylococcus aureus|Rep:
           Extracellular matrix protein-binding protein emp
           precursor - Staphylococcus aureus
          Length = 340

 Score = 31.5 bits (68), Expect = 6.3
 Identities = 13/36 (36%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
 Frame = -2

Query: 325 TTKKKDHQLVSSRIHYKKK-SSYELFHIYSYAN*AK 221
           T  K +H  ++++ HYKK  +SY+  H++ + N AK
Sbjct: 143 TQNKVNHHFITTQTHYKKVITSYKSTHVHKHVNHAK 178


>UniRef50_UPI00006CF389 Cluster: Kinesin motor domain containing
           protein; n=1; Tetrahymena thermophila SB210|Rep: Kinesin
           motor domain containing protein - Tetrahymena
           thermophila SB210
          Length = 992

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = -1

Query: 278 QEKVLLRTFPHIFIR*LSKSKNNIASANQHYDYYEEKRTRILGRCIG 138
           QE +L+ T     +  L K   NIA +N+   Y E + TR+L  C+G
Sbjct: 274 QEAILINTS----LTALGKCLQNIARSNKSIPYRESRMTRVLQNCMG 316


>UniRef50_A6QBB2 Cluster: Sensor protein; n=1; Sulfurovum sp.
           NBC37-1|Rep: Sensor protein - Sulfurovum sp. (strain
           NBC37-1)
          Length = 509

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -2

Query: 379 THTPLSPITEHQNLYS-LYTTKKKDHQLVSSRIH 281
           TH+ + P+ +H  + S  Y   K DHQLVS  +H
Sbjct: 97  THSRMVPLVKHYLIKSNYYEIDKHDHQLVSGNLH 130


>UniRef50_Q23B13 Cluster: Protein kinase domain containing protein;
            n=1; Tetrahymena thermophila SB210|Rep: Protein kinase
            domain containing protein - Tetrahymena thermophila SB210
          Length = 1433

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -2

Query: 382  NTHTPLSPITEHQNLYSLYTTKKKDHQLVSSRIHYKKKSSYE 257
            N  +PL+P + + N+Y+   T  K +Q  SS    KKK+ YE
Sbjct: 899  NQASPLTPASNYNNIYN--DTSNKKNQSSSSYTSIKKKNFYE 938


>UniRef50_Q17EI1 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 263

 Score = 31.1 bits (67), Expect = 8.3
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +2

Query: 20  AEF*ILIEDFHFFWTIIDYFFLVSGKSWNLLDYVLKLYYYR 142
           +EF  LI D  F  +I D+ FL+    +++ D+ L ++ YR
Sbjct: 94  SEFRFLIFDLRFSTSICDFRFLIFDFRFSIFDFRLSIFVYR 134


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 357,560,707
Number of Sequences: 1657284
Number of extensions: 6503224
Number of successful extensions: 18131
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17565
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18128
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)