Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0953X.Seq
         (398 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK127120-1|BAC86839.1|  163|Homo sapiens protein ( Homo sapiens ...    29   7.5  
AK123853-1|BAC85709.1|  163|Homo sapiens protein ( Homo sapiens ...    29   7.5  

>AK127120-1|BAC86839.1|  163|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45177 fis, clone BRAWH3046959. ).
          Length = 163

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -1

Query: 356 HRTSELVFTLHYQEKRSSTCV--IKNPLQEKVLLRTFPHIFI 237
           H    + ++LHYQ +  + C+  +  P  +K +L+  PH  +
Sbjct: 23  HTAMGMAWSLHYQGQGGTLCLVGVSTPSHDKAVLQGLPHFSV 64


>AK123853-1|BAC85709.1|  163|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41859 fis, clone NT2RP7010128. ).
          Length = 163

 Score = 28.7 bits (61), Expect = 7.5
 Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
 Frame = -1

Query: 356 HRTSELVFTLHYQEKRSSTCV--IKNPLQEKVLLRTFPHIFI 237
           H    + ++LHYQ +  + C+  +  P  +K +L+  PH  +
Sbjct: 23  HTAMGMAWSLHYQGQGGTLCLVGVSTPSHDKAVLQGLPHFSV 64


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,031,309
Number of Sequences: 237096
Number of extensions: 985381
Number of successful extensions: 2112
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2056
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2112
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2870859500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)