Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0953X.Seq
         (398 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011032-1|AAR30192.1|  330|Drosophila melanogaster RE45514p pro...    29   3.0  
AE014297-2212|AAF55318.2|  330|Drosophila melanogaster CG14883-P...    29   3.0  
BT030446-1|ABP87888.1|  373|Drosophila melanogaster IP09427p pro...    28   4.0  
BT025852-1|ABF85752.1|  373|Drosophila melanogaster IP15048p pro...    28   4.0  
AE014134-2657|AAN10923.1|  393|Drosophila melanogaster CG12448-P...    27   7.0  

>BT011032-1|AAR30192.1|  330|Drosophila melanogaster RE45514p
           protein.
          Length = 330

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +2

Query: 101 WNLLDYVLKLYYYRCTCQVSLSFFLHN 181
           W LL   LK+ Y    C VSL FF  N
Sbjct: 4   WRLLWLALKMIYQLLCCSVSLIFFCFN 30


>AE014297-2212|AAF55318.2|  330|Drosophila melanogaster CG14883-PA
           protein.
          Length = 330

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 13/27 (48%), Positives = 14/27 (51%)
 Frame = +2

Query: 101 WNLLDYVLKLYYYRCTCQVSLSFFLHN 181
           W LL   LK+ Y    C VSL FF  N
Sbjct: 4   WRLLWLALKMIYQLLCCSVSLIFFCFN 30


>BT030446-1|ABP87888.1|  373|Drosophila melanogaster IP09427p
           protein.
          Length = 373

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = -3

Query: 315 KKIINLCHQESITRKSPLTNFSTYIHTLIEQKQE*HCFCKPTLR 184
           K  +    + + TR +   N   Y+  L+    E +CFCKP ++
Sbjct: 324 KDFVKRLAKRNKTRNAQDRNIKYYLDDLLTTADEYNCFCKPQVK 367


>BT025852-1|ABF85752.1|  373|Drosophila melanogaster IP15048p
           protein.
          Length = 373

 Score = 28.3 bits (60), Expect = 4.0
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = -3

Query: 315 KKIINLCHQESITRKSPLTNFSTYIHTLIEQKQE*HCFCKPTLR 184
           K  +    + + TR +   N   Y+  L+    E +CFCKP ++
Sbjct: 324 KDFVKRLAKRNKTRNAQDRNIKYYLDDLLTTADEYNCFCKPQVK 367


>AE014134-2657|AAN10923.1|  393|Drosophila melanogaster CG12448-PB,
           isoform B protein.
          Length = 393

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 12/41 (29%), Positives = 19/41 (46%)
 Frame = -3

Query: 315 KKIINLCHQESITRKSPLTNFSTYIHTLIEQKQE*HCFCKP 193
           K  +    + + TR +   N   Y+  L+    E +CFCKP
Sbjct: 303 KDFVKRLAKRNKTRNAQDRNIKYYLDDLLTTADEYNCFCKP 343


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,222,256
Number of Sequences: 53049
Number of extensions: 304858
Number of successful extensions: 678
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)