Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0953X.Seq
         (398 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding pr...    21   3.9  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   5.2  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   5.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   6.9  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    20   9.1  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      20   9.1  

>AB083010-1|BAC54131.1|  132|Apis mellifera fatty acid binding
           protein protein.
          Length = 132

 Score = 21.4 bits (43), Expect = 3.9
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = -2

Query: 373 TPLSPITEHQNLYSLYTT 320
           +P+  +TE+  LY+L TT
Sbjct: 38  SPVVELTENNGLYTLKTT 55


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 385 FNTHTPLSPITEHQN 341
           +N  TP  P+TE  N
Sbjct: 293 YNPFTPFGPVTEKVN 307


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 5.2
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = -2

Query: 385 FNTHTPLSPITEHQN 341
           +N  TP  P+TE  N
Sbjct: 293 YNPFTPFGPVTEKVN 307


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 383 QHAHTVIPDHRTSELVFTLHYQEK 312
           Q  +  I DH T+   F  HY+ +
Sbjct: 353 QMKNVTIVDHHTASESFMKHYENE 376


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 86  QEKNNQLSSRKNGN 45
           Q  NNQ +++KN N
Sbjct: 429 QNDNNQKNNKKNAN 442


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 20.2 bits (40), Expect = 9.1
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 80  KNNQLSSRKNGNPLLKFKTP 21
           KNN +SS+  GN + +  +P
Sbjct: 216 KNNHVSSKVEGNGVHEENSP 235


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,072
Number of Sequences: 438
Number of extensions: 2183
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9885360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)