Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0943X.Seq
         (436 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041829-1|AAH41829.1|  300|Homo sapiens chromosome 17 open read...    29   9.1  
AK074284-1|BAB85036.1|  300|Homo sapiens protein ( Homo sapiens ...    29   9.1  

>BC041829-1|AAH41829.1|  300|Homo sapiens chromosome 17 open reading
           frame 39 protein.
          Length = 300

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 33/90 (36%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
 Frame = +3

Query: 174 CSSLEQESTIKERGLQRQRAKNRLSGRGPLR-EP--SP*SSFLGSRCRKALNRNPKGSPR 344
           CS +       ER L+RQRA  R S   P R  P  S  ++ LGSR   A+   P   P 
Sbjct: 19  CSQVPGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATLLGSRAAAAV---PLPLPP 75

Query: 345 FRA*RGKPANVARKERKKSKGAGAMALASV 434
             A  G PA   R E     GA A + AS+
Sbjct: 76  ALA-PGDPAMPVRTECPPPAGASAASAASL 104


>AK074284-1|BAB85036.1|  300|Homo sapiens protein ( Homo sapiens
           cDNA FLJ23704 fis, clone HEP10851. ).
          Length = 300

 Score = 28.7 bits (61), Expect = 9.1
 Identities = 33/90 (36%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
 Frame = +3

Query: 174 CSSLEQESTIKERGLQRQRAKNRLSGRGPLR-EP--SP*SSFLGSRCRKALNRNPKGSPR 344
           CS +       ER L+RQRA  R S   P R  P  S  ++ LGSR   A+   P   P 
Sbjct: 19  CSQVPGSRWRPERLLRRQRAGGRPSRPHPARARPGLSLPATLLGSRAAAAV---PLPLPP 75

Query: 345 FRA*RGKPANVARKERKKSKGAGAMALASV 434
             A  G PA   R E     GA A + AS+
Sbjct: 76  ALA-PGDPAMPVRTECPPPAGASAASAASL 104


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,587,628
Number of Sequences: 237096
Number of extensions: 1433526
Number of successful extensions: 6474
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6474
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3487985734
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)