Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0943X.Seq
         (436 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.         30   1.2  
AY058638-1|AAL13867.1|  492|Drosophila melanogaster LD33732p pro...    30   1.6  
AE014296-326|AAF47543.2| 1062|Drosophila melanogaster CG7971-PA,...    30   1.6  
AE014296-325|AAZ66051.1|  849|Drosophila melanogaster CG7971-PD,...    30   1.6  
AE014296-324|AAF47542.2| 1107|Drosophila melanogaster CG7971-PC,...    30   1.6  
M97933-1|AAA28566.1|  569|Drosophila melanogaster germ cell-less...    28   6.3  
BT021324-1|AAX33472.1|  264|Drosophila melanogaster RE08647p pro...    28   6.3  
AY061319-1|AAL28867.1|  569|Drosophila melanogaster LD23660p pro...    28   6.3  
AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p pro...    28   6.3  
AE014297-2161|ABC66177.1|  297|Drosophila melanogaster CG8927-PB...    28   6.3  
AE013599-707|AAF59048.1|  569|Drosophila melanogaster CG8411-PA ...    28   6.3  
BT024974-1|ABE01204.1|  520|Drosophila melanogaster IP15030p pro...    27   8.3  
AF305875-1|AAK55517.1| 1060|Drosophila melanogaster putative thr...    27   8.3  
AE014134-1143|AAF52425.2| 1060|Drosophila melanogaster CG11326-P...    27   8.3  

>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
          Length = 1494

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = -2

Query: 243  DGFSPFDVGVHVL**WTLVPNWNNTQPYLGLFF*FIRDFADFGLLVKK*ADLTK 82
            DG  P D G+  +  + +  N +  Q +LGL   F R   DF  L K   D+ K
Sbjct: 923  DGIMPNDKGIEAIKNFPIPNNVHTVQSFLGLCSYFRRFIKDFSRLAKPLHDILK 976


>AY058638-1|AAL13867.1|  492|Drosophila melanogaster LD33732p
           protein.
          Length = 492

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
 Frame = +3

Query: 156 RDRVECCSSLEQESTIKERGLQRQRAKNRLSGRGPLREPSP*SSFLG--SRCRKALNRNP 329
           RDR    S   Q S  ++R  +RQR+K R   +   R      S  G  S+ R+ L    
Sbjct: 165 RDRSTDRSKENQRSNERQRSKERQRSKERERSKDRQRSRERRRSKEGQLSKDRQGLKERQ 224

Query: 330 KGSPRFRA*RGKPANVARKERKKSK 404
           + + R R+   +P+   ++ R++ +
Sbjct: 225 RSNERKRSKERQPSKEKQRSRERQR 249


>AE014296-326|AAF47543.2| 1062|Drosophila melanogaster CG7971-PA,
           isoform A protein.
          Length = 1062

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
 Frame = +3

Query: 156 RDRVECCSSLEQESTIKERGLQRQRAKNRLSGRGPLREPSP*SSFLG--SRCRKALNRNP 329
           RDR    S   Q S  ++R  +RQR+K R   +   R      S  G  S+ R+ L    
Sbjct: 522 RDRSTDRSKENQRSNERQRSKERQRSKERERSKDRQRSRERRRSKEGQLSKDRQGLKERQ 581

Query: 330 KGSPRFRA*RGKPANVARKERKKSK 404
           + + R R+   +P+   ++ R++ +
Sbjct: 582 RSNERKRSKERQPSKEKQRSRERQR 606


>AE014296-325|AAZ66051.1|  849|Drosophila melanogaster CG7971-PD,
           isoform D protein.
          Length = 849

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
 Frame = +3

Query: 156 RDRVECCSSLEQESTIKERGLQRQRAKNRLSGRGPLREPSP*SSFLG--SRCRKALNRNP 329
           RDR    S   Q S  ++R  +RQR+K R   +   R      S  G  S+ R+ L    
Sbjct: 522 RDRSTDRSKENQRSNERQRSKERQRSKERERSKDRQRSRERRRSKEGQLSKDRQGLKERQ 581

Query: 330 KGSPRFRA*RGKPANVARKERKKSK 404
           + + R R+   +P+   ++ R++ +
Sbjct: 582 RSNERKRSKERQPSKEKQRSRERQR 606


>AE014296-324|AAF47542.2| 1107|Drosophila melanogaster CG7971-PC,
           isoform C protein.
          Length = 1107

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
 Frame = +3

Query: 156 RDRVECCSSLEQESTIKERGLQRQRAKNRLSGRGPLREPSP*SSFLG--SRCRKALNRNP 329
           RDR    S   Q S  ++R  +RQR+K R   +   R      S  G  S+ R+ L    
Sbjct: 522 RDRSTDRSKENQRSNERQRSKERQRSKERERSKDRQRSRERRRSKEGQLSKDRQGLKERQ 581

Query: 330 KGSPRFRA*RGKPANVARKERKKSK 404
           + + R R+   +P+   ++ R++ +
Sbjct: 582 RSNERKRSKERQPSKEKQRSRERQR 606


>M97933-1|AAA28566.1|  569|Drosophila melanogaster germ cell-less
           protein protein.
          Length = 569

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 14/64 (21%), Positives = 31/64 (48%)
 Frame = -1

Query: 202 IVDSCSKLEQHSTLSRSILLIYKGFCRFRPIG*KMS*FNKNLTRILTKY*RLQFAIRHSG 23
           I+D C+++   +    + +  Y+  C++  +G K S F      +L+ Y +    +RH  
Sbjct: 154 IIDKCAEVMVDNISPETAIQYYEAACQYGVVGVKKSTFQWFQINLLSIYSKQPNLLRHIS 213

Query: 22  AQLL 11
            +L+
Sbjct: 214 IELM 217


>BT021324-1|AAX33472.1|  264|Drosophila melanogaster RE08647p
           protein.
          Length = 264

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +3

Query: 186 EQESTIKERGLQRQRAKNRLSGRGPLREPSP*SSFLGSRCRKALNRNPKGSPRFRA*R 359
           EQ+    ++   +Q A   L+G+ P+ +PSP   FL S   +     P  S RF A R
Sbjct: 94  EQQLAQAQQSQFQQAAAAFLAGQQPVEQPSPVQQFLQSDDSQPAAILPPPSSRFPAER 151


>AY061319-1|AAL28867.1|  569|Drosophila melanogaster LD23660p
           protein.
          Length = 569

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 14/64 (21%), Positives = 31/64 (48%)
 Frame = -1

Query: 202 IVDSCSKLEQHSTLSRSILLIYKGFCRFRPIG*KMS*FNKNLTRILTKY*RLQFAIRHSG 23
           I+D C+++   +    + +  Y+  C++  +G K S F      +L+ Y +    +RH  
Sbjct: 154 IIDKCAEVMVDNISPETAIQYYEAACQYGVVGVKKSTFQWFQINLLSIYSKQPNLLRHIS 213

Query: 22  AQLL 11
            +L+
Sbjct: 214 IELM 217


>AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p
           protein.
          Length = 1062

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
 Frame = +3

Query: 156 RDRVECCSSLEQESTIKERGLQRQRAK--NRLSGRGPLREPSP*SSFLGSRCRKALNRNP 329
           RDR    S   Q S  ++R  +RQR+K   R   R   RE         S+ R+ L    
Sbjct: 522 RDRSTDRSKENQRSNERQRSKERQRSKERERSKDRQRSRERRRSKERQLSKDRQGLKERQ 581

Query: 330 KGSPRFRA*RGKPANVARKERKKSK 404
           + + R R+   +P+   ++ R++ +
Sbjct: 582 RSNERKRSKERQPSKEKQRSRERQR 606


>AE014297-2161|ABC66177.1|  297|Drosophila melanogaster CG8927-PB,
           isoform B protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +3

Query: 186 EQESTIKERGLQRQRAKNRLSGRGPLREPSP*SSFLGSRCRKALNRNPKGSPRFRA*R 359
           EQ+    ++   +Q A   L+G+ P+ +PSP   FL S   +     P  S RF A R
Sbjct: 94  EQQLAQAQQSQFQQAAAAFLAGQQPVEQPSPVQQFLQSDDSQPAAILPPPSSRFPAER 151


>AE013599-707|AAF59048.1|  569|Drosophila melanogaster CG8411-PA
           protein.
          Length = 569

 Score = 27.9 bits (59), Expect = 6.3
 Identities = 14/64 (21%), Positives = 31/64 (48%)
 Frame = -1

Query: 202 IVDSCSKLEQHSTLSRSILLIYKGFCRFRPIG*KMS*FNKNLTRILTKY*RLQFAIRHSG 23
           I+D C+++   +    + +  Y+  C++  +G K S F      +L+ Y +    +RH  
Sbjct: 154 IIDKCAEVMVDNISPETAIQYYEAACQYGVVGVKKSTFQWFQINLLSIYSKQPNLLRHIS 213

Query: 22  AQLL 11
            +L+
Sbjct: 214 IELM 217


>BT024974-1|ABE01204.1|  520|Drosophila melanogaster IP15030p
           protein.
          Length = 520

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 355 DGESRRTWREKNGRNRKERALWRWQV 432
           DGE+R  W++      KER  +RW +
Sbjct: 416 DGEARLLWKDPKNIAWKERTSYRWSL 441


>AF305875-1|AAK55517.1| 1060|Drosophila melanogaster putative
            thrombospondin protein.
          Length = 1060

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 355  DGESRRTWREKNGRNRKERALWRWQV 432
            DGE+R  W++      KER  +RW +
Sbjct: 956  DGEARLLWKDPKNIAWKERTSYRWSL 981


>AE014134-1143|AAF52425.2| 1060|Drosophila melanogaster CG11326-PA,
            isoform A protein.
          Length = 1060

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +1

Query: 355  DGESRRTWREKNGRNRKERALWRWQV 432
            DGE+R  W++      KER  +RW +
Sbjct: 956  DGEARLLWKDPKNIAWKERTSYRWSL 981


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,500,751
Number of Sequences: 53049
Number of extensions: 434791
Number of successful extensions: 865
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)