Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0940.Seq
(729 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_04_0035 - 12632439-12632728,12633000-12633093,12633118-126335... 36 0.044
08_01_0397 - 3509186-3510291,3510322-3512335 33 0.18
11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861 32 0.54
08_02_0955 + 22994266-22995630 32 0.54
10_08_0765 - 20421813-20423174,20423591-20423771,20423862-204241... 31 0.94
03_05_0459 + 24533233-24533278,24533881-24534167,24534287-245345... 31 0.94
03_02_0823 - 11538677-11539324 31 1.2
03_01_0373 - 2904914-2904949,2905030-2905144,2906446-2906534,290... 30 1.6
04_01_0123 - 1283197-1283292,1283330-1284439,1284790-1285177,128... 30 2.2
02_05_0415 + 28787353-28787496,28787658-28788204,28788297-287883... 30 2.2
10_07_0060 - 12481431-12481545,12481641-12481753,12482002-124823... 29 3.8
09_04_0377 + 17086775-17088310 29 3.8
11_01_0087 - 654461-654912,655878-657186,659080-659187 29 5.0
09_02_0057 - 3697255-3698116,3698191-3698351,3698442-3698636,369... 29 5.0
06_03_0858 + 25448807-25448815,25451253-25452038,25452956-25452991 29 5.0
04_04_1466 - 33799104-33799229,33799659-33799669,33800052-338002... 29 5.0
12_02_1166 + 26643045-26644078,26644238-26644322,26646800-26646937 28 6.6
11_02_0077 - 8073139-8073168,8073419-8073751 28 6.6
09_04_0032 - 13953323-13955269 28 6.6
04_03_0983 + 21423086-21423280,21423330-21423404,21423531-214236... 28 6.6
02_05_0973 + 33209385-33209456,33210517-33210721,33210810-332109... 28 6.6
01_02_0049 + 10641363-10641563,10641640-10641750,10641893-106421... 28 6.6
11_06_0180 + 20962420-20962528,20962618-20962699,20962831-209629... 28 8.7
11_06_0155 - 20712601-20713553,20713618-20714000,20714240-207142... 28 8.7
11_01_0156 - 1290361-1290876,1291095-1291201,1292027-1292105,129... 28 8.7
05_06_0277 + 26885621-26886064,26886148-26886317,26887038-268879... 28 8.7
04_04_1502 - 34023891-34024346 28 8.7
>11_04_0035 -
12632439-12632728,12633000-12633093,12633118-12633573,
12633633-12633833
Length = 346
Score = 35.5 bits (78), Expect = 0.044
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = +2
Query: 53 QTRQEAGPRVHRQEDQDQSAASLREDSDHRDAAEDPLDREGHHAWSPRQRRGPRGHRDAG 232
+ R +A PR HR S A E + ED +D G + +SPR G H +AG
Sbjct: 261 RARGKAAPRKHRPASFADSDADEEEAEGEEEGEEDAVDETGEYLFSPRHDPG-HEHVEAG 319
Query: 233 RQRS 244
S
Sbjct: 320 AASS 323
>08_01_0397 - 3509186-3510291,3510322-3512335
Length = 1039
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/69 (24%), Positives = 29/69 (42%)
Frame = +2
Query: 59 RQEAGPRVHRQEDQDQSAASLREDSDHRDAAEDPLDREGHHAWSPRQRRGPRGHRDAGRQ 238
R+ + R HR D+++S++ D D + DRE H R R + R+
Sbjct: 21 RERSSSRHHRDRDRERSSSRHHHREDRDDDRDRDRDRERRHREKERDREERKAREREERE 80
Query: 239 RSKPDESVK 265
+ K E +
Sbjct: 81 KEKERERAR 89
>11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861
Length = 158
Score = 31.9 bits (69), Expect = 0.54
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +2
Query: 68 AGPRVHRQEDQDQSAASLREDSDHRDAAEDPLDREGHHAWSPRQRRGPRGHRDAGRQRSK 247
AG R R+ + AA R++ + +A E R+RR G R AGR++ +
Sbjct: 4 AGRRRRRRRGGGRRAAGRRKEEE--EAGRRKAGEEARRGAGKRKRRRGGGRRAAGRRKEE 61
Query: 248 PDESVKET-VKASEGASIKIRTEQGGYR 328
+ ++ +A GA + R GG R
Sbjct: 62 EEAGRRKAGEEARRGAGKRKRRRGGGRR 89
>08_02_0955 + 22994266-22995630
Length = 454
Score = 31.9 bits (69), Expect = 0.54
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 62 QEAGPRVHRQEDQDQSAASLREDSDHRDAAE-DPLDREGHHAWSPRQRRGPR 214
+E PR+H D D SAA+ E ++ AA D D EG+ PR RR R
Sbjct: 91 RERSPRLH--SDSDNSAAATAEAAEAAAAAAFDDGDDEGNATPPPRSRRSSR 140
>10_08_0765 -
20421813-20423174,20423591-20423771,20423862-20424117,
20424768-20425095,20425218-20426156,20427015-20427761,
20428517-20428789
Length = 1361
Score = 31.1 bits (67), Expect = 0.94
Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 10/63 (15%)
Frame = +3
Query: 51 TRLAKKLALECTDKRIRTNL-------LQVCERIPTIGTQLK---ILSTVKATMLGAQGS 200
T + ++LA EC++KR RT+L QV +G Q K LS ++ G QG
Sbjct: 754 TNIVERLAKECSEKRQRTSLGVISPYTAQVIALQERLGKQFKNHEFLSVTVKSIDGFQGG 813
Query: 201 EED 209
EED
Sbjct: 814 EED 816
>03_05_0459 +
24533233-24533278,24533881-24534167,24534287-24534568,
24534628-24534682,24534895-24534935,24537484-24537549
Length = 258
Score = 31.1 bits (67), Expect = 0.94
Identities = 19/79 (24%), Positives = 36/79 (45%)
Frame = +2
Query: 83 HRQEDQDQSAASLREDSDHRDAAEDPLDREGHHAWSPRQRRGPRGHRDAGRQRSKPDESV 262
H+++D+D+ + H+D ++D ++E +++ H D+G RSK
Sbjct: 137 HKEKDKDKYKDQKKHKHRHKDRSKDK-EKEKEKEKEKEKKKDKSAHHDSGADRSKKHH-- 193
Query: 263 KETVKASEGASIKIRTEQG 319
E V S K R ++G
Sbjct: 194 -EKVVLSTLLDAKKRKQEG 211
>03_02_0823 - 11538677-11539324
Length = 215
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 188 SPRQRRGPRGHRDAGRQRSKPDESVKETVKASEGASIKIRTEQ 316
S R R GP G AG++R +P + T +++ A+ +I +Q
Sbjct: 86 SARCRLGPAGGGRAGKRRPRPSKRAPTTYISTDAATFRIMVQQ 128
>03_01_0373 -
2904914-2904949,2905030-2905144,2906446-2906534,
2906670-2906889,2907921-2907985,2908619-2908879,
2909204-2909417,2910643-2910698,2910891-2910947,
2911043-2911115,2912711-2913225
Length = 566
Score = 30.3 bits (65), Expect = 1.6
Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Frame = +2
Query: 83 HRQEDQDQSA-ASLREDSDH-RDAAEDPLDREGHHAWSPRQRRGPRGHRDAGRQRSKPDE 256
HR D+D+ S RE D RD D DRE ++RR ++ +++ + E
Sbjct: 76 HRDRDKDRDRHRSSRERRDRDRDRDRDEKDREKERD-KDKERRSRDREKEKEKEKERERE 134
Query: 257 SVKETVKASEGASIKIRTEQGGYRLRWVRR 346
K+ + S S + R ++ R R+ R
Sbjct: 135 REKDRERRSRSRSERRRDDEERDRERYRER 164
>04_01_0123 -
1283197-1283292,1283330-1284439,1284790-1285177,
1285523-1287609
Length = 1226
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 59 RQEAGPRVHRQEDQDQSAASLREDSDHR-DAAEDPLDREGHHAWSPRQRRGPRGHRDAGR 235
RQEA + +S R D+ +R D + + D++ HH + R+RR P + GR
Sbjct: 297 RQEARRTRDNVNRSRRHVSSRRHDNGNRGDRSNEDRDQDNHHDHNDRERRVP-DNTGRGR 355
Query: 236 QRSKPDE 256
+ + D+
Sbjct: 356 RHNDVDD 362
>02_05_0415 +
28787353-28787496,28787658-28788204,28788297-28788392,
28788532-28788645,28788929-28789962,28790053-28790124
Length = 668
Score = 29.9 bits (64), Expect = 2.2
Identities = 20/80 (25%), Positives = 37/80 (46%)
Frame = +3
Query: 12 ATAKAIAEASEEVTRLAKKLALECTDKRIRTNLLQVCERIPTIGTQLKILSTVKATMLGA 191
A KA A EEVT K ++ +L Q E + ++K+ +
Sbjct: 177 AARKAAAPVVEEVTA-TKTTTRRSARSKVMVDLEQEVEDMAVALQEVKVQEEDPKDVASD 235
Query: 192 QGSEEDQEATEMLVGNAQNL 251
+ +E++EAT++L GN++ +
Sbjct: 236 EKCDEEEEATKILGGNSKEV 255
>10_07_0060 -
12481431-12481545,12481641-12481753,12482002-12482317,
12482595-12482596,12482735-12482833,12483014-12483089,
12484230-12484297
Length = 262
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 69 LALECTDKRIRTNLLQVCERIPTIGTQLKILSTVK 173
L C D R RTN Q+ + + +G QLK L K
Sbjct: 116 LKTNCIDSRDRTNRAQIVDGLVGLGRQLKALVQTK 150
>09_04_0377 + 17086775-17088310
Length = 511
Score = 29.1 bits (62), Expect = 3.8
Identities = 17/73 (23%), Positives = 32/73 (43%)
Frame = +2
Query: 77 RVHRQEDQDQSAASLREDSDHRDAAEDPLDREGHHAWSPRQRRGPRGHRDAGRQRSKPDE 256
R H + + + EDS+ +ED +DR S R ++ R R + R++ K ++
Sbjct: 232 RHHSSDTEGDDNSKAEEDSEGSYDSEDSMDRRKKKR-SRRHKKSKRRGRSSRRKKRKSND 290
Query: 257 SVKETVKASEGAS 295
+ E E +
Sbjct: 291 TASEGSSEEEAVA 303
>11_01_0087 - 654461-654912,655878-657186,659080-659187
Length = 622
Score = 28.7 bits (61), Expect = 5.0
Identities = 23/57 (40%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Frame = +2
Query: 89 QEDQDQSAASLREDSDHRDAAEDPLDREGHHAWSPRQRRG--PRGHRDAGRQRSKPD 253
Q+ Q SA+S R A+ED G HA PRQR G R R R RS D
Sbjct: 506 QQQQHCSASSSRLGPASASASEDG---GGGHAGRPRQREGEEERRRRRMSRNRSMVD 559
>09_02_0057 -
3697255-3698116,3698191-3698351,3698442-3698636,
3698728-3699126,3699208-3699477,3700102-3700695
Length = 826
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +2
Query: 95 DQDQSAASLREDSDHRDAAEDPLDREGHHAWSP--RQRRGPRGHRDAGRQRSK 247
D+D+S+ R+D D + D R H A R +RG G D R+R +
Sbjct: 2 DRDRSSRRPRDDDDRHHRSRDDHHRRRHDADDDHRRHKRGGGGDDDDDRRRRR 54
>06_03_0858 + 25448807-25448815,25451253-25452038,25452956-25452991
Length = 276
Score = 28.7 bits (61), Expect = 5.0
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +2
Query: 89 QEDQDQSAASLREDSDHRDAAEDP--LDREGHHAWSPRQRRG-PRGHRDAGRQRSKPDES 259
+E++ +A LR +H D AE+P + + A +P R GHR++ R +P S
Sbjct: 29 RENKGATAPPLRHPYNHNDPAENPGVIRAADNLAAAPSSRPATSSGHRESQRHHQQPPGS 88
Query: 260 VKETVKASEGAS 295
+ ++ AS
Sbjct: 89 HQHHRRSGSVAS 100
>04_04_1466 -
33799104-33799229,33799659-33799669,33800052-33800200,
33800261-33800299,33800690-33800746,33800839-33801628,
33801705-33801980,33802051-33802117,33802211-33802285,
33802618-33802812,33802927-33803076,33803152-33803522,
33804070-33804193,33804246-33804275,33804306-33804417,
33804919-33804985,33805138-33805180,33805768-33805872
Length = 928
Score = 28.7 bits (61), Expect = 5.0
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
Frame = +2
Query: 74 PRVHRQEDQDQSAASLRE-DSDHRDAAEDPLDR--EGHHAWSPRQRRGPRGHRDAGRQRS 244
PR QD + ++ D R+ + D DR +G H R R+ +G +RS
Sbjct: 711 PRSRGNSKQDDAKGERKDYQKDVREKSRDSADRREKGKHEKEDRSRQTTKGSSSHSSRRS 770
Query: 245 KPDESVKETVKASEGASIKIRTEQ 316
+ + T K S + +++
Sbjct: 771 RSPSARSRTKKESSSHRESVSSDE 794
>12_02_1166 + 26643045-26644078,26644238-26644322,26646800-26646937
Length = 418
Score = 28.3 bits (60), Expect = 6.6
Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 2/76 (2%)
Frame = +2
Query: 65 EAGPRVHRQEDQDQSAASLREDSD--HRDAAEDPLDREGHHAWSPRQRRGPRGHRDAGRQ 238
EA + E + AA+ ED D H+ A + + R R RGH A R
Sbjct: 114 EASSAKAKNESPKEEAAAAEEDDDVEHKVAVRTTSEEKKKKRRRKRGRGRVRGHGVAKRP 173
Query: 239 RSKPDESVKETVKASE 286
+ + +E K + +E
Sbjct: 174 KKEDEEGTKLSAPKAE 189
>11_02_0077 - 8073139-8073168,8073419-8073751
Length = 120
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 312 SRAATDCAGSAGRPGTRSNFDHICCNRDC 398
+R DC SAGR T D C N+DC
Sbjct: 53 TRENRDCHVSAGRKATTIGEDGACENKDC 81
>09_04_0032 - 13953323-13955269
Length = 648
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/39 (46%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +3
Query: 30 AEASEEVTRLAKKLALECTDKR--IRTNLLQVCERIPTI 140
A A EE+ RL K LA+ECT++R R + +V RI I
Sbjct: 593 AHAEEEMMRLLK-LAVECTEQRPERRPTMAEVAARIEHI 630
>04_03_0983 +
21423086-21423280,21423330-21423404,21423531-21423632,
21423721-21423774,21423880-21423972,21424526-21424618,
21427329-21427433,21427517-21427615,21427701-21427997,
21428512-21428622
Length = 407
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/41 (26%), Positives = 23/41 (56%)
Frame = +2
Query: 68 AGPRVHRQEDQDQSAASLREDSDHRDAAEDPLDREGHHAWS 190
AG +++Q+ ++ E+ + + AED D++GH+ S
Sbjct: 337 AGFGWQEEDEQEDNSKKPEEEQEEEEDAEDEYDKQGHNVES 377
>02_05_0973 +
33209385-33209456,33210517-33210721,33210810-33210975,
33211268-33211490,33211928-33212004,33212090-33212183,
33212202-33212271,33212350-33212447,33212565-33212692,
33212772-33212900,33213013-33213421,33213984-33214105,
33214224-33214313,33215092-33215304,33215453-33215584,
33216258-33216333,33216403-33216420
Length = 773
Score = 28.3 bits (60), Expect = 6.6
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 69 LALECTDKRIRTNLLQVCERIPTIGTQLKILSTVKATMLG 188
L C D RTN+ Q + +G QL +L +V++ LG
Sbjct: 486 LRTNCIDCLDRTNVAQYAYGLAALGHQLHVLGSVESPELG 525
>01_02_0049 +
10641363-10641563,10641640-10641750,10641893-10642123,
10642253-10642357,10642546-10642704
Length = 268
Score = 28.3 bits (60), Expect = 6.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +3
Query: 9 IATAKAIAEASEEVTRLAKKLALECTDKRIRTNLLQVCE-RIPTIGTQLKIL 161
I+ A+A AEAS E LA+ L + + N L CE R+ + QL ++
Sbjct: 119 ISVAQATAEASAESAMLARLQCLSLSGGHEKINSLGECELRVKKVEEQLDLV 170
>11_06_0180 +
20962420-20962528,20962618-20962699,20962831-20962948,
20963024-20963062,20963181-20963343,20963706-20963921,
20964039-20964116,20964244-20964500,20964544-20964575,
20964815-20965197,20965262-20965831,20966250-20966343,
20966365-20966541,20966761-20966963,20968244-20968301,
20969126-20969381,20969553-20969789
Length = 1023
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -1
Query: 444 QSIVVVCSVELLRANHNLCCSR 379
+S VV+ S ELLR +HN+ C R
Sbjct: 567 KSAVVIASSELLRFSHNIPCYR 588
>11_06_0155 -
20712601-20713553,20713618-20714000,20714240-20714271,
20714315-20714571,20714699-20714724,20714894-20715081,
20715302-20715595,20715714-20715752,20715827-20715944,
20716076-20716157,20716610-20716668,20717156-20717221,
20717358-20717447,20718142-20718236
Length = 893
Score = 27.9 bits (59), Expect = 8.7
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -1
Query: 444 QSIVVVCSVELLRANHNLCCSR 379
+S VV+ S ELLR +HN+ C R
Sbjct: 651 KSAVVIASSELLRFSHNIPCYR 672
>11_01_0156 -
1290361-1290876,1291095-1291201,1292027-1292105,
1292609-1293523
Length = 538
Score = 27.9 bits (59), Expect = 8.7
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -3
Query: 352 GRPADPAQSVAALLRADFDGCAFRCF 275
GRP DPA S AA R D A R F
Sbjct: 73 GRPDDPASSSAAAARCDPSHAAVRVF 98
>05_06_0277 +
26885621-26886064,26886148-26886317,26887038-26887941,
26888544-26888575,26888862-26888928,26889116-26889173,
26889329-26889421,26890366-26890480,26890847-26890894,
26891012-26891057,26891161-26891231,26891865-26891870,
26891991-26892038,26892439-26892488,26892892-26893154
Length = 804
Score = 27.9 bits (59), Expect = 8.7
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Frame = +2
Query: 77 RVHRQEDQDQSAASLREDSDHRD----AAEDPLDREGHHAWSPRQ-RRG----PRGHRDA 229
R R + D+ S + +DH D A E DR+ + S R RRG P HR
Sbjct: 428 RGRRSDGDDRKVNSREQRADHDDRRDSARERRADRDESNGESGRSSRRGRSVSPEEHRHR 487
Query: 230 GRQRSKPDESVKETVKASEG 289
GR+ S+ +S + + A+ G
Sbjct: 488 GRRESR--QSPRSSRSAAHG 505
>04_04_1502 - 34023891-34024346
Length = 151
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 380 DVVEVRSGTRATGGPSAVGSRPAPC 306
D+V+ +G A GP+A S+P PC
Sbjct: 48 DLVQRLTGKPAADGPAAASSQPDPC 72
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,817,942
Number of Sequences: 37544
Number of extensions: 379253
Number of successful extensions: 1258
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1256
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1909952136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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