Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0940.Seq
(729 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 24 1.7
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 22 5.2
EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate c... 21 9.0
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 9.0
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.0
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 21 9.0
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 9.0
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 9.0
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 9.0
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 9.0
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.8 bits (49), Expect = 1.7
Identities = 10/48 (20%), Positives = 19/48 (39%)
Frame = +2
Query: 83 HRQEDQDQSAASLREDSDHRDAAEDPLDREGHHAWSPRQRRGPRGHRD 226
H Q Q+ A + + + P ++ +Q+RGP + D
Sbjct: 816 HHQSTHPQAQAQAQPQQQQQQQQQQPQQQQQQQQQQQQQQRGPMTNDD 863
Score = 21.8 bits (44), Expect = 6.8
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -2
Query: 341 GPSAVGSRPAP 309
GPSA G RP P
Sbjct: 1356 GPSASGGRPVP 1366
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 22.2 bits (45), Expect = 5.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 488 HGLLPPPLSTH*TGSKALSSSV 423
HGL PP L+ GS L S++
Sbjct: 331 HGLQPPDLAGTSQGSAGLPSAI 352
>EF051030-1|ABN05618.1| 118|Apis mellifera phosphoenolpyruvate
carboxykinase protein.
Length = 118
Score = 21.4 bits (43), Expect = 9.0
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -3
Query: 499 RRYVTACYPRPC 464
+RY+TA +P C
Sbjct: 11 KRYITAAFPSAC 22
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 9.0
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = +3
Query: 33 EASEEVTRLAKKLALECTDKRIR----TNLLQVCERIPTIGTQLKILSTVKATMLGAQGS 200
E E RL KK+ LE +RIR + R P + +T K +L +G
Sbjct: 48 EREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRSNTSNTSKTVILSDKGP 107
Query: 201 EEDQ-EATEM 227
E Q ATE+
Sbjct: 108 EGIQINATEL 117
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 9.0
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = +3
Query: 33 EASEEVTRLAKKLALECTDKRIR----TNLLQVCERIPTIGTQLKILSTVKATMLGAQGS 200
E E RL KK+ LE +RIR + R P + +T K +L +G
Sbjct: 48 EREREHQRLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKGP 107
Query: 201 EEDQ-EATEM 227
E Q ATE+
Sbjct: 108 EGIQINATEL 117
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 21.4 bits (43), Expect = 9.0
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = +3
Query: 33 EASEEVTRLAKKLALECTDKRIR----TNLLQVCERIPTIGTQLKILSTVKATMLGAQGS 200
E E RL KK+ LE +RIR + R P + +T K +L +G
Sbjct: 48 EREREHERLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRSNTSNTSKTVILSNKGP 107
Query: 201 EEDQ-EATEM 227
E Q ATE+
Sbjct: 108 EGIQINATEL 117
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.4 bits (43), Expect = 9.0
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 33 EASEEVTRLAKKLALECTDKRIR 101
E E RL KK+ LE +RIR
Sbjct: 48 EREREHQRLTKKMILEYELRRIR 70
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.4 bits (43), Expect = 9.0
Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 5/70 (7%)
Frame = +3
Query: 33 EASEEVTRLAKKLALECTDKRIR----TNLLQVCERIPTIGTQLKILSTVKATMLGAQGS 200
E E RL KK+ LE +RIR + R P + +T K +L +G
Sbjct: 48 EREREHQRLMKKMILEYELRRIREIEKLGSERSKSRSPDSRDRSNASNTSKTVILSDKGP 107
Query: 201 EEDQ-EATEM 227
E Q ATE+
Sbjct: 108 EGIQINATEL 117
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 9.0
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +3
Query: 33 EASEEVTRLAKKLALECTDKRIR 101
E E RL KK+ LE +RIR
Sbjct: 48 EREREHQRLMKKMILEYEIRRIR 70
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.4 bits (43), Expect = 9.0
Identities = 8/25 (32%), Positives = 18/25 (72%)
Frame = +1
Query: 298 QNPHGAGRLPTALGPPVALVPDLTS 372
++P G G+LP + G P+ +P++++
Sbjct: 402 RSPAG-GQLPPSAGAPMPPIPNMSN 425
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,019
Number of Sequences: 438
Number of extensions: 3058
Number of successful extensions: 31
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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