Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0936.Seq
         (592 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    24   1.1  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   1.9  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          22   4.5  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    22   4.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    22   4.5  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   4.5  

>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
 Frame = -2

Query: 189 REPDSYSYM---PRPEAYAPPPCIALDWY 112
           +E DS S +   P   AY+PPP     WY
Sbjct: 10  QEADSTSPLLTPPHNPAYSPPPSYCDPWY 38


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 192 MREPDSYSYMPRPEAYAPP 136
           M+ P S S  P P  Y PP
Sbjct: 270 MQRPKSASLSPPPHVYNPP 288


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = -2

Query: 207 ECFSFMREPDSYSYMPRPEAYAPPPCIALDW 115
           + ++F++E  +Y Y    +A  P      DW
Sbjct: 22  QSYNFLQEKTTYEYYENNQALPPITYPPSDW 52


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 329 LENSHNTTPTNDRKKWN 379
           L N ++ T T  RKKWN
Sbjct: 147 LSNVNSLTLTLKRKKWN 163


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 329 LENSHNTTPTNDRKKWN 379
           L N ++ T T  RKKWN
Sbjct: 73  LSNVNSLTLTLKRKKWN 89


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/31 (25%), Positives = 15/31 (48%)
 Frame = -2

Query: 207 ECFSFMREPDSYSYMPRPEAYAPPPCIALDW 115
           + ++F++E  +Y Y    +A  P      DW
Sbjct: 13  QSYNFLQEKTTYEYYENNQALPPITYPPSDW 43


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,319
Number of Sequences: 336
Number of extensions: 2135
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)