Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0935.Seq
         (707 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    24   1.1  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    24   1.1  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    24   1.1  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    24   1.1  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    24   1.1  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    24   1.1  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           24   1.1  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    24   1.1  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    24   1.1  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    24   1.4  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    24   1.4  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    24   1.4  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   5.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   5.6  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   5.6  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   5.6  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      22   5.6  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   5.6  
AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase l...    22   5.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    22   5.6  

>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 584 PRSVPSLANPKSLNLRKSS 640
           PRS P L+ P + N  KSS
Sbjct: 123 PRSTPPLSTPSNSNATKSS 141


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 584 PRSVPSLANPKSLNLRKSS 640
           PRS P L+ P + N  KSS
Sbjct: 123 PRSTPPLSTPSNSNATKSS 141


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 584 PRSVPSLANPKSLNLRKSS 640
           PRS P L+ P + N  KSS
Sbjct: 123 PRSTPPLSTPSNSNATKSS 141


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 584 PRSVPSLANPKSLNLRKSS 640
           PRS P L+ P + N  KSS
Sbjct: 123 PRSTPPLSTPSNSNATKSS 141


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 584 PRSVPSLANPKSLNLRKSS 640
           PRS P L+ P + N  KSS
Sbjct: 123 PRSTPPLSTPSNSNATKSS 141


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 584 PRSVPSLANPKSLNLRKSS 640
           PRS P L+ P + N  KSS
Sbjct: 79  PRSTPPLSTPSNSNATKSS 97


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 584 PRSVPSLANPKSLNLRKSS 640
           PRS P L+ P + N  KSS
Sbjct: 123 PRSTPPLSTPSNSNATKSS 141


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 584 PRSVPSLANPKSLNLRKSS 640
           PRS P L+ P + N  KSS
Sbjct: 123 PRSTPPLSTPSNSNATKSS 141


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 584 PRSVPSLANPKSLNLRKSS 640
           PRS P L+ P + N  KSS
Sbjct: 123 PRSTPPLSTPSNSNATKSS 141


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 586 RRAPSQPQPWPAYEQPHRISCRP 518
           ++  SQP  WPA+    R S RP
Sbjct: 181 KKTESQPMLWPAWVYCTRYSDRP 203


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 319 TYPTAGGGPREIRGASR 369
           T+P+ GGGPR   G  R
Sbjct: 64  THPSIGGGPRFSSGVGR 80


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 319 TYPTAGGGPREIRGASR 369
           T+P+ GGGPR   G  R
Sbjct: 64  THPSIGGGPRFSSGVGR 80


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 143 VFGLLLTHGSAVERIV 96
           VFG LLT+ S+VE ++
Sbjct: 9   VFGALLTYVSSVEYLI 24


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +1

Query: 322 YPTAGGGPREIRGASRDRHRQAVRGQ 399
           YP  G    E+RG SR ++ + V  Q
Sbjct: 445 YPLIGAMREELRGISRGKNAKDVDWQ 470


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 595 HAPRRAPSQPQPW 557
           H   +AP  PQPW
Sbjct: 39  HLRFKAPQAPQPW 51


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 595 HAPRRAPSQPQPW 557
           H   +AP  PQPW
Sbjct: 41  HLRFKAPQAPQPW 53


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 595 HAPRRAPSQPQPW 557
           H   +AP  PQPW
Sbjct: 39  HLRFKAPQAPQPW 51


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 595 HAPRRAPSQPQPW 557
           H   +AP  PQPW
Sbjct: 41  HLRFKAPQAPQPW 53


>AF260821-1|AAG02019.1|  134|Tribolium castaneum alpha-esterase like
           protein E2 protein.
          Length = 134

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -2

Query: 595 HAPRRAPSQPQPW 557
           H   +AP  PQPW
Sbjct: 13  HLRFKAPQAPQPW 25


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +1

Query: 298 RSGCPEPTYPTAGGGPREIRGASR 369
           R GC   +  T  GGPR  R A++
Sbjct: 54  RWGCARASSATTMGGPRYGRAAAQ 77


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.133    0.383 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,972
Number of Sequences: 336
Number of extensions: 2413
Number of successful extensions: 20
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)