Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0934.Seq
(755 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin Nipp... 30 3.0
AE014296-1210|AAF50598.1| 198|Drosophila melanogaster CG14829-P... 30 3.0
AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,... 30 3.0
AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,... 30 3.0
X65158-1|CAA46276.1| 469|Drosophila melanogaster developmental ... 29 5.2
M92841-1|AAA28673.1| 469|Drosophila melanogaster LIM-homeodomai... 29 5.2
BT005201-1|AAO61758.1| 469|Drosophila melanogaster HL02012p pro... 29 5.2
AY069815-1|AAL39960.1| 468|Drosophila melanogaster SD05618p pro... 29 5.2
AE013599-103|AAM68357.2| 246|Drosophila melanogaster CG8376-PB,... 29 5.2
AE013599-102|AAF57314.1| 469|Drosophila melanogaster CG8376-PA,... 29 5.2
>AF114160-1|AAD26161.2| 2077|Drosophila melanogaster adherin
Nipped-B protein.
Length = 2077
Score = 30.3 bits (65), Expect = 3.0
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 168 CLSVCNVYSSVSWFQ*NQEEHALH 97
CL +CN+YS+VS Q QE++ H
Sbjct: 604 CLLICNIYSTVSDLQFLQEDNVSH 627
>AE014296-1210|AAF50598.1| 198|Drosophila melanogaster CG14829-PA
protein.
Length = 198
Score = 30.3 bits (65), Expect = 3.0
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 94 GMKRVFFLILLKPGYTRIDITYREAV 171
G+ ++LL PG TR+D+ Y+EA+
Sbjct: 141 GIMAELLVVLLTPGKTRLDVAYKEAL 166
>AE013599-26|EAA46003.3| 2077|Drosophila melanogaster CG17704-PF,
isoform F protein.
Length = 2077
Score = 30.3 bits (65), Expect = 3.0
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 168 CLSVCNVYSSVSWFQ*NQEEHALH 97
CL +CN+YS+VS Q QE++ H
Sbjct: 604 CLLICNIYSTVSDLQFLQEDNVSH 627
>AE013599-25|EAA46004.3| 2077|Drosophila melanogaster CG17704-PE,
isoform E protein.
Length = 2077
Score = 30.3 bits (65), Expect = 3.0
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 168 CLSVCNVYSSVSWFQ*NQEEHALH 97
CL +CN+YS+VS Q QE++ H
Sbjct: 604 CLLICNIYSTVSDLQFLQEDNVSH 627
>X65158-1|CAA46276.1| 469|Drosophila melanogaster developmental
regulatory protein protein.
Length = 469
Score = 29.5 bits (63), Expect = 5.2
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 236 KTISNFIILININTHYILVGKGCSLIFCTQQNLV*RYFFFHDLKKTWLSYLLITRRNNAK 415
K I F I++NT Y+ G+G L ++ + R F H +T SY I +AK
Sbjct: 337 KDIEAFTANIDLNTEYVDFGRGSHLSSSSRTKRM-RTSFKHHQLRTMKSYFAINHNPDAK 395
>M92841-1|AAA28673.1| 469|Drosophila melanogaster LIM-homeodomain
apterous protein protein.
Length = 469
Score = 29.5 bits (63), Expect = 5.2
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 236 KTISNFIILININTHYILVGKGCSLIFCTQQNLV*RYFFFHDLKKTWLSYLLITRRNNAK 415
K I F I++NT Y+ G+G L ++ + R F H +T SY I +AK
Sbjct: 337 KDIEAFTANIDLNTEYVDFGRGSHLSSSSRTKRM-RTSFKHHQLRTMKSYFAINHNPDAK 395
>BT005201-1|AAO61758.1| 469|Drosophila melanogaster HL02012p
protein.
Length = 469
Score = 29.5 bits (63), Expect = 5.2
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 236 KTISNFIILININTHYILVGKGCSLIFCTQQNLV*RYFFFHDLKKTWLSYLLITRRNNAK 415
K I F I++NT Y+ G+G L ++ + R F H +T SY I +AK
Sbjct: 337 KDIEAFTANIDLNTEYVDFGRGSHLSSSSRTKRM-RTSFKHHQLRTMKSYFAINHNPDAK 395
>AY069815-1|AAL39960.1| 468|Drosophila melanogaster SD05618p
protein.
Length = 468
Score = 29.5 bits (63), Expect = 5.2
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 236 KTISNFIILININTHYILVGKGCSLIFCTQQNLV*RYFFFHDLKKTWLSYLLITRRNNAK 415
K I F I++NT Y+ G+G L ++ + R F H +T SY I +AK
Sbjct: 336 KDIEAFTANIDLNTEYVDFGRGSHLSSSSRTKRM-RTSFKHHQLRTMKSYFAINHNPDAK 394
>AE013599-103|AAM68357.2| 246|Drosophila melanogaster CG8376-PB,
isoform B protein.
Length = 246
Score = 29.5 bits (63), Expect = 5.2
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 236 KTISNFIILININTHYILVGKGCSLIFCTQQNLV*RYFFFHDLKKTWLSYLLITRRNNAK 415
K I F I++NT Y+ G+G L ++ + R F H +T SY I +AK
Sbjct: 114 KDIEAFTANIDLNTEYVDFGRGSHLSSSSRTKRM-RTSFKHHQLRTMKSYFAINHNPDAK 172
>AE013599-102|AAF57314.1| 469|Drosophila melanogaster CG8376-PA,
isoform A protein.
Length = 469
Score = 29.5 bits (63), Expect = 5.2
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +2
Query: 236 KTISNFIILININTHYILVGKGCSLIFCTQQNLV*RYFFFHDLKKTWLSYLLITRRNNAK 415
K I F I++NT Y+ G+G L ++ + R F H +T SY I +AK
Sbjct: 337 KDIEAFTANIDLNTEYVDFGRGSHLSSSSRTKRM-RTSFKHHQLRTMKSYFAINHNPDAK 395
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,849,149
Number of Sequences: 53049
Number of extensions: 642350
Number of successful extensions: 1255
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1255
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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