Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0934.Seq
(755 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z96102-3|CAE17868.1| 686|Caenorhabditis elegans Hypothetical pr... 31 0.67
Z81491-16|CAE17747.1| 686|Caenorhabditis elegans Hypothetical p... 31 0.67
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 30 1.5
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 30 1.5
AF024503-9|AAG24084.1| 327|Caenorhabditis elegans Serpentine re... 30 1.5
Z93375-2|CAB07564.2| 359|Caenorhabditis elegans Hypothetical pr... 29 2.7
U64844-8|AAB18308.1| 330|Caenorhabditis elegans Serpentine rece... 29 3.6
Z78198-8|CAB01574.2| 333|Caenorhabditis elegans Hypothetical pr... 28 6.2
U64844-9|AAB18309.1| 330|Caenorhabditis elegans Serpentine rece... 28 6.2
AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical... 28 6.2
>Z96102-3|CAE17868.1| 686|Caenorhabditis elegans Hypothetical
protein D1086.9 protein.
Length = 686
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +E RG R A Q+ + + HRGSR + + + + +R Q+G++ +D+
Sbjct: 348 ADQEQHRGSRAAGQKGTQQADQEQHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQLDQ 407
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +E RG R A Q+ + + HRGSR + + + + +R Q+G++ +D+
Sbjct: 386 ADQEQHRGSRAAGQKGTQQLDQERHRGSRAAGQKGTQQADQEQHRGSRAAGQKGTQQLDQ 445
Query: 186 HFAR 197
R
Sbjct: 446 ESKR 449
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +E RG R A ++ + + HRGSR + + R +R Q+G++ D+
Sbjct: 367 ADQEQHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQLDQERHRGSRAAGQKGTQQADQ 426
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +3
Query: 12 REIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDEHF 191
+E RG R A ++ + + HRGSR + + + + +R Q+G++ +D+
Sbjct: 504 QERHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQADQEQHRGSRAAGQKGTQQLDQES 563
Query: 192 AR 197
R
Sbjct: 564 KR 565
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +++R R A Q+ + + HRGSR + + + + +R Q+G++ +D+
Sbjct: 232 ADADMKRPARAAGQKRTQQADQEQHRGSRAAGQKGTQQADQEQHRGSRSAGQKGTQQLDQ 291
Query: 186 HFAR 197
R
Sbjct: 292 ESKR 295
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +E RG R A ++ + + HRGSR + + + + +R Q+G++ D+
Sbjct: 483 ADQEQHRGSRAAGEKGTQQLDQERHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQADQ 542
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +E RG R A ++ + + HRGSR + + + + +R ++G++ D+
Sbjct: 329 ADQEQHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQADQEQHRGSRAAGEKGTQQADQ 388
>Z81491-16|CAE17747.1| 686|Caenorhabditis elegans Hypothetical
protein D1086.9 protein.
Length = 686
Score = 31.5 bits (68), Expect = 0.67
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +E RG R A Q+ + + HRGSR + + + + +R Q+G++ +D+
Sbjct: 348 ADQEQHRGSRAAGQKGTQQADQEQHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQLDQ 407
Score = 31.5 bits (68), Expect = 0.67
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +E RG R A Q+ + + HRGSR + + + + +R Q+G++ +D+
Sbjct: 386 ADQEQHRGSRAAGQKGTQQLDQERHRGSRAAGQKGTQQADQEQHRGSRAAGQKGTQQLDQ 445
Query: 186 HFAR 197
R
Sbjct: 446 ESKR 449
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +E RG R A ++ + + HRGSR + + R +R Q+G++ D+
Sbjct: 367 ADQEQHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQLDQERHRGSRAAGQKGTQQADQ 426
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +3
Query: 12 REIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDEHF 191
+E RG R A ++ + + HRGSR + + + + +R Q+G++ +D+
Sbjct: 504 QERHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQADQEQHRGSRAAGQKGTQQLDQES 563
Query: 192 AR 197
R
Sbjct: 564 KR 565
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +++R R A Q+ + + HRGSR + + + + +R Q+G++ +D+
Sbjct: 232 ADADMKRPARAAGQKRTQQADQEQHRGSRAAGQKGTQQADQEQHRGSRSAGQKGTQQLDQ 291
Query: 186 HFAR 197
R
Sbjct: 292 ESKR 295
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +E RG R A ++ + + HRGSR + + + + +R Q+G++ D+
Sbjct: 483 ADQEQHRGSRAAGEKGTQQLDQERHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQADQ 542
Score = 27.9 bits (59), Expect = 8.2
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +E RG R A ++ + + HRGSR + + + + +R ++G++ D+
Sbjct: 329 ADQEQHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQADQEQHRGSRAAGEKGTQQADQ 388
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 9 QREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPD--SIETRIHSNRHYIQRGSRHMD 182
+R + +G++ D+ + R++ R D ++E R+ SN+ +QR +MD
Sbjct: 386 ERNVTKGRKEDDEEKEEADKNGYAPSFIRSQMREACDDMTVEKRLQSNKRGVQRAHGYMD 445
Query: 183 EHFARR 200
FA++
Sbjct: 446 RSFAKK 451
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 9 QREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPD--SIETRIHSNRHYIQRGSRHMD 182
+R + +G++ D+ + R++ R D ++E R+ SN+ +QR +MD
Sbjct: 386 ERNVTKGRKEDDEEKEEADKNGYAPSFIRSQMREACDDMTVEKRLQSNKRGVQRAHGYMD 445
Query: 183 EHFARR 200
FA++
Sbjct: 446 RSFAKK 451
>AF024503-9|AAG24084.1| 327|Caenorhabditis elegans Serpentine
receptor, class h protein266 protein.
Length = 327
Score = 30.3 bits (65), Expect = 1.5
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 313 LLYPAEFSLEVFFLSRSEKNMVKLFTYYEEK*C*NIPKLFNKSIMDESYIRNIFI-YCYQ 489
L+Y AE ++ V LSR+ KN +K+ TY ++ + I + N+ + Y
Sbjct: 192 LIYAAELNVVVALLSRNMKNTMKMATYSKQTAMMQKKFIQAMYIQAAVFFLNLQLPILYT 251
Query: 490 INVTESDFFNYTAKQYIY 543
+ +DF++ TA ++
Sbjct: 252 VLSQFTDFYSQTANNLVF 269
>Z93375-2|CAB07564.2| 359|Caenorhabditis elegans Hypothetical
protein C38C6.4 protein.
Length = 359
Score = 29.5 bits (63), Expect = 2.7
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = +1
Query: 424 KLFNK--SIMDESYIRNIFIYCYQINVTESDFFNYTAKQYIYQDNNILSFV*HG*FISCY 597
K FNK SI++ SY +F++ QI + F Y YI D F S
Sbjct: 17 KYFNKTYSIIEGSYNYYLFVFYIQIALIFIVLFYYLLNVYI--DIKTCQF-------STN 67
Query: 598 RETVHHHFVV*LNIGHILCTI 660
+ +HH + +GH++C I
Sbjct: 68 TQKIHHAIYLPCVLGHVMCLI 88
>U64844-8|AAB18308.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein213 protein.
Length = 330
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +3
Query: 624 CLIKHRPYIMYNITKKLINLDYVCC-VDLILVFIETVY 734
C+I H P M ++ L+N ++ C DL L F+ T Y
Sbjct: 39 CIIFHTPSSMKSVKLSLLNFHFLSCFFDLGLSFLTTPY 76
>Z78198-8|CAB01574.2| 333|Caenorhabditis elegans Hypothetical
protein F55C5.9 protein.
Length = 333
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +1
Query: 457 YIRNIFIYCYQINVTESDFFNYTAKQYIYQDNNILSFV 570
Y+ + FI ++ E +F Y A + YQ N FV
Sbjct: 98 YVLSAFIIQTSFSIIEMFYFRYKASVFDYQSRNFTKFV 135
>U64844-9|AAB18309.1| 330|Caenorhabditis elegans Serpentine
receptor, class h protein212 protein.
Length = 330
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 624 CLIKHRPYIMYNITKKLINLDYVCC-VDLILVFIETVY 734
C+I H P M ++ L+N + C DL L F+ T Y
Sbjct: 39 CIIFHTPSSMKSVKLSLLNFHFFSCFFDLGLSFLTTPY 76
>AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical
protein Y62H9A.13 protein.
Length = 348
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -3
Query: 195 VQNVHPYVYCLSVCNVYSSVSWFQ*NQEEHALHSAENLDGFVEPVHQQRADQQPV 31
V N +P VY V + S+ + N E HSAEN D V + + QP+
Sbjct: 106 VSNENPIVYYQKVAS--STTNPVYNNSSEEKTHSAENQDNIEYGVKTEPPENQPM 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,236,071
Number of Sequences: 27780
Number of extensions: 373187
Number of successful extensions: 897
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 830
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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