Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0933.Seq
(524 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z96102-3|CAE17868.1| 686|Caenorhabditis elegans Hypothetical pr... 31 0.38
Z81491-16|CAE17747.1| 686|Caenorhabditis elegans Hypothetical p... 31 0.38
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 30 0.88
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 30 0.88
AF024503-9|AAG24084.1| 327|Caenorhabditis elegans Serpentine re... 30 1.2
AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical... 28 3.6
>Z96102-3|CAE17868.1| 686|Caenorhabditis elegans Hypothetical
protein D1086.9 protein.
Length = 686
Score = 31.5 bits (68), Expect = 0.38
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +E RG R A Q+ + + HRGSR + + + + +R Q+G++ +D+
Sbjct: 348 ADQEQHRGSRAAGQKGTQQADQEQHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQLDQ 407
Score = 31.5 bits (68), Expect = 0.38
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +E RG R A Q+ + + HRGSR + + + + +R Q+G++ +D+
Sbjct: 386 ADQEQHRGSRAAGQKGTQQLDQERHRGSRAAGQKGTQQADQEQHRGSRAAGQKGTQQLDQ 445
Query: 186 HFAR 197
R
Sbjct: 446 ESKR 449
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +E RG R A ++ + + HRGSR + + R +R Q+G++ D+
Sbjct: 367 ADQEQHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQLDQERHRGSRAAGQKGTQQADQ 426
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +3
Query: 12 REIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDEHF 191
+E RG R A ++ + + HRGSR + + + + +R Q+G++ +D+
Sbjct: 504 QERHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQADQEQHRGSRAAGQKGTQQLDQES 563
Query: 192 AR 197
R
Sbjct: 564 KR 565
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +++R R A Q+ + + HRGSR + + + + +R Q+G++ +D+
Sbjct: 232 ADADMKRPARAAGQKRTQQADQEQHRGSRAAGQKGTQQADQEQHRGSRSAGQKGTQQLDQ 291
Query: 186 HFAR 197
R
Sbjct: 292 ESKR 295
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +E RG R A ++ + + HRGSR + + + + +R Q+G++ D+
Sbjct: 483 ADQEQHRGSRAAGEKGTQQLDQERHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQADQ 542
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +E RG R A ++ + + HRGSR + + + + +R ++G++ D+
Sbjct: 329 ADQEQHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQADQEQHRGSRAAGEKGTQQADQ 388
Score = 27.1 bits (57), Expect = 8.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSR 92
A +E RG R A Q+ + + HRGSR
Sbjct: 521 ADQEQHRGSRAAGQKGTQQADQEQHRGSR 549
>Z81491-16|CAE17747.1| 686|Caenorhabditis elegans Hypothetical
protein D1086.9 protein.
Length = 686
Score = 31.5 bits (68), Expect = 0.38
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +E RG R A Q+ + + HRGSR + + + + +R Q+G++ +D+
Sbjct: 348 ADQEQHRGSRAAGQKGTQQADQEQHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQLDQ 407
Score = 31.5 bits (68), Expect = 0.38
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +E RG R A Q+ + + HRGSR + + + + +R Q+G++ +D+
Sbjct: 386 ADQEQHRGSRAAGQKGTQQLDQERHRGSRAAGQKGTQQADQEQHRGSRAAGQKGTQQLDQ 445
Query: 186 HFAR 197
R
Sbjct: 446 ESKR 449
Score = 29.5 bits (63), Expect = 1.5
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +E RG R A ++ + + HRGSR + + R +R Q+G++ D+
Sbjct: 367 ADQEQHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQLDQERHRGSRAAGQKGTQQADQ 426
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/62 (24%), Positives = 30/62 (48%)
Frame = +3
Query: 12 REIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDEHF 191
+E RG R A ++ + + HRGSR + + + + +R Q+G++ +D+
Sbjct: 504 QERHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQADQEQHRGSRAAGQKGTQQLDQES 563
Query: 192 AR 197
R
Sbjct: 564 KR 565
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +++R R A Q+ + + HRGSR + + + + +R Q+G++ +D+
Sbjct: 232 ADADMKRPARAAGQKRTQQADQEQHRGSRAAGQKGTQQADQEQHRGSRSAGQKGTQQLDQ 291
Query: 186 HFAR 197
R
Sbjct: 292 ESKR 295
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/60 (25%), Positives = 29/60 (48%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +E RG R A ++ + + HRGSR + + + + +R Q+G++ D+
Sbjct: 483 ADQEQHRGSRAAGEKGTQQLDQERHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQADQ 542
Score = 27.9 bits (59), Expect = 4.7
Identities = 14/60 (23%), Positives = 29/60 (48%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPDSIETRIHSNRHYIQRGSRHMDE 185
A +E RG R A ++ + + HRGSR + + + + +R ++G++ D+
Sbjct: 329 ADQEQHRGSRAAGEKGTQQADQEQHRGSRAAGQKGTQQADQEQHRGSRAAGEKGTQQADQ 388
Score = 27.1 bits (57), Expect = 8.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 6 AQREIERGKRVADQRVADEQVPQSHRGSR 92
A +E RG R A Q+ + + HRGSR
Sbjct: 521 ADQEQHRGSRAAGQKGTQQADQEQHRGSR 549
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 30.3 bits (65), Expect = 0.88
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 9 QREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPD--SIETRIHSNRHYIQRGSRHMD 182
+R + +G++ D+ + R++ R D ++E R+ SN+ +QR +MD
Sbjct: 386 ERNVTKGRKEDDEEKEEADKNGYAPSFIRSQMREACDDMTVEKRLQSNKRGVQRAHGYMD 445
Query: 183 EHFARR 200
FA++
Sbjct: 446 RSFAKK 451
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 30.3 bits (65), Expect = 0.88
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 9 QREIERGKRVADQRVADEQVPQSHRGSRRNEARVLPD--SIETRIHSNRHYIQRGSRHMD 182
+R + +G++ D+ + R++ R D ++E R+ SN+ +QR +MD
Sbjct: 386 ERNVTKGRKEDDEEKEEADKNGYAPSFIRSQMREACDDMTVEKRLQSNKRGVQRAHGYMD 445
Query: 183 EHFARR 200
FA++
Sbjct: 446 RSFAKK 451
>AF024503-9|AAG24084.1| 327|Caenorhabditis elegans Serpentine
receptor, class h protein266 protein.
Length = 327
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +1
Query: 313 LLYPAEFSLEVFFLSRSEKNMVKLFTYYEE 402
L+Y AE ++ V LSR+ KN +K+ TY ++
Sbjct: 192 LIYAAELNVVVALLSRNMKNTMKMATYSKQ 221
>AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical
protein Y62H9A.13 protein.
Length = 348
Score = 28.3 bits (60), Expect = 3.6
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = -3
Query: 195 VQNVHPYVYCLSVCNVYSSVSWFQ*NQEEHALHSAENLDGFVEPVHQQRADQQPV 31
V N +P VY V + S+ + N E HSAEN D V + + QP+
Sbjct: 106 VSNENPIVYYQKVAS--STTNPVYNNSSEEKTHSAENQDNIEYGVKTEPPENQPM 158
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,506,567
Number of Sequences: 27780
Number of extensions: 233231
Number of successful extensions: 597
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 593
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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