Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0930.Seq
         (413 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058410-1|AAL13639.1|  367|Drosophila melanogaster GH18546p pro...    27   7.4  
AE014296-3373|AAF51607.1|  367|Drosophila melanogaster CG5955-PA...    27   7.4  
BT003223-1|AAO24978.1|  543|Drosophila melanogaster RE01132p pro...    27   9.8  
AY069310-1|AAL39455.1|  406|Drosophila melanogaster LD02349p pro...    27   9.8  
AF158371-1|AAD48781.1|  631|Drosophila melanogaster activator pr...    27   9.8  
AE014134-2685|AAF53510.1|  631|Drosophila melanogaster CG7664-PA...    27   9.8  

>AY058410-1|AAL13639.1|  367|Drosophila melanogaster GH18546p
           protein.
          Length = 367

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +2

Query: 101 LNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIH 238
           L +GK     RP+ R PMM     L   A+L  + A  EQL RR++
Sbjct: 237 LRNGKYTCYLRPDTRLPMMYIEDCL--RALLEFMRAPNEQLKRRVY 280


>AE014296-3373|AAF51607.1|  367|Drosophila melanogaster CG5955-PA
           protein.
          Length = 367

 Score = 27.5 bits (58), Expect = 7.4
 Identities = 18/46 (39%), Positives = 24/46 (52%)
 Frame = +2

Query: 101 LNSGKILESFRPEERFPMMSTFKVLLCGAVLSRIDAGQEQLGRRIH 238
           L +GK     RP+ R PMM     L   A+L  + A  EQL RR++
Sbjct: 237 LRNGKYTCYLRPDTRLPMMYIEDCL--RALLEFMRAPNEQLKRRVY 280


>BT003223-1|AAO24978.1|  543|Drosophila melanogaster RE01132p
           protein.
          Length = 543

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +2

Query: 17  VFAHPETLVKVKDAEDQLGARVGYIELDLNSGK 115
           V  H +  V+ +D E+ LG  V Y+E+D  +G+
Sbjct: 312 VIEHTDNFVRSEDLEE-LGGTVSYVEIDEMTGQ 343


>AY069310-1|AAL39455.1|  406|Drosophila melanogaster LD02349p
           protein.
          Length = 406

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +2

Query: 17  VFAHPETLVKVKDAEDQLGARVGYIELDLNSGK 115
           V  H +  V+ +D E+ LG  V Y+E+D  +G+
Sbjct: 87  VIEHTDNFVRSEDLEE-LGGTVSYVEIDEMTGQ 118


>AF158371-1|AAD48781.1|  631|Drosophila melanogaster activator
           protein 4 protein.
          Length = 631

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +2

Query: 17  VFAHPETLVKVKDAEDQLGARVGYIELDLNSGK 115
           V  H +  V+ +D E+ LG  V Y+E+D  +G+
Sbjct: 312 VIEHTDNFVRSEDLEE-LGGTVSYVEIDEMTGQ 343


>AE014134-2685|AAF53510.1|  631|Drosophila melanogaster CG7664-PA
           protein.
          Length = 631

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +2

Query: 17  VFAHPETLVKVKDAEDQLGARVGYIELDLNSGK 115
           V  H +  V+ +D E+ LG  V Y+E+D  +G+
Sbjct: 312 VIEHTDNFVRSEDLEE-LGGTVSYVEIDEMTGQ 343


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,575,115
Number of Sequences: 53049
Number of extensions: 358072
Number of successful extensions: 800
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 763
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1230182214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)