Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0928.Seq
(678 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0750 - 6754126-6755248,6755331-6755791 31 1.1
12_02_0640 - 21447470-21448309 30 1.5
12_02_0635 - 21430245-21431156 30 1.5
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814... 30 1.5
03_06_0074 - 31476094-31476215,31477803-31478238,31478438-314784... 30 2.0
06_01_0760 - 5676973-5677830 25 2.5
06_03_0854 + 25400855-25403741,25406174-25407708 29 2.6
02_05_0894 - 32585640-32585672,32585939-32585967,32586937-32588443 29 2.6
09_02_0626 + 11352690-11353078,11353106-11354006 29 3.4
09_02_0495 + 9880714-9881196 29 3.4
01_06_1341 - 36434098-36436080 29 3.4
01_06_0184 - 27282021-27282313,27284238-27285374,27285524-27285617 29 3.4
06_03_1382 - 29758759-29758806,29758888-29758943,29759901-297600... 29 4.5
01_03_0082 - 12280109-12281068 29 4.5
12_02_0643 - 21461123-21461902 28 6.0
09_06_0264 - 21929086-21931368 28 6.0
08_02_1442 + 27120604-27120890,27121029-27121166,27121280-271213... 28 6.0
04_04_0872 + 28903099-28903644,28903739-28904544,28904620-28905004 28 6.0
01_03_0059 + 12109301-12109330,12109465-12109587,12109663-12110112 28 6.0
11_01_0106 - 792190-792730,793905-794018,794206-794540 28 7.9
10_07_0107 - 12936839-12937030,12937305-12937386,12937476-129375... 28 7.9
09_04_0751 + 19927164-19927835,19927926-19928663 28 7.9
04_04_1410 + 33363784-33364086,33364221-33364280,33364388-333644... 28 7.9
>12_01_0750 - 6754126-6755248,6755331-6755791
Length = 527
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Frame = -2
Query: 428 PVRSLEWG*RSGSLVAEGNRLRFLVAVR-SW-YRQGSGGDDQVCTPGPLKAP 279
P L W S A G R F+VA R +W +R+G GD C G L P
Sbjct: 212 PREFLRWLTSQPSWAALGGRDHFMVAARTTWMFRRGGAGDSLGCGNGFLSRP 263
>12_02_0640 - 21447470-21448309
Length = 279
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 263 GGTERGHTTXHSSGVVVRIVVTAHDQASSVTIA 165
GG E GH+ + +V+RIV AS++T A
Sbjct: 10 GGKEEGHSASEAVSIVLRIVTVGLSLASAITTA 42
>12_02_0635 - 21430245-21431156
Length = 303
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 263 GGTERGHTTXHSSGVVVRIVVTAHDQASSVTIA 165
GG E GH+ + +V+RIV AS++T A
Sbjct: 10 GGKEEGHSASEAVSIVLRIVTVGLSLASAITTA 42
>06_03_0874 -
25580417-25580419,25580504-25580604,25580828-25581411,
25581523-25581594,25581667-25581793,25583412-25583516,
25583643-25583676
Length = 341
Score = 30.3 bits (65), Expect = 1.5
Identities = 19/69 (27%), Positives = 27/69 (39%)
Frame = +2
Query: 251 VLYRQPEAAQAPSTGQVYIPDRRRQTLADTSYVPQQENEVYYPQQPENPIFSPTQATELA 430
+L R E A P T Y P +Y PQ + E Y P QP+ + P +
Sbjct: 210 LLARDVEHAAYPPTSTTYPPQPYPPQPQGQTYPPQPQGETYQP-QPQRETYPPQPQVQPY 268
Query: 431 DPTEKIELY 457
P + + Y
Sbjct: 269 PPKPQGQPY 277
>03_06_0074 -
31476094-31476215,31477803-31478238,31478438-31478485,
31478569-31479018,31479567-31479681,31480052-31480905
Length = 674
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +1
Query: 259 PPARSRTGAFNGPGVHT*SSPPDPCRYQLRTATRKRSLLPSATREPDLQPHS 414
PP R PG+ T P TAT KR+ P++T P PH+
Sbjct: 43 PPLPPRRSPQKRPGLPTIPENGPPAGMATATATPKRTRTPTSTCAPPPPPHA 94
>06_01_0760 - 5676973-5677830
Length = 285
Score = 24.6 bits (51), Expect(2) = 2.5
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = +3
Query: 159 GSGDSNRGGLVMSRYYNPYYNPRAVXGGMA 248
GSG + G + Y PYY P G A
Sbjct: 171 GSGSGSGSGYGQAGGYGPYYGPYGGSGAYA 200
Score = 23.4 bits (48), Expect(2) = 2.5
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +3
Query: 108 QAYPYNPYYGNVDSLSYGSGDSNRGG 185
QA Y PY GN + G G GG
Sbjct: 140 QAGGYGPYGGNAYAQGGGQGGGGGGG 165
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 29.5 bits (63), Expect = 2.6
Identities = 27/81 (33%), Positives = 36/81 (44%)
Frame = +1
Query: 112 RIPTIPTMETWTPFPTARAIVTEEAWS*AVTTILTTTPELWXVVWPRSVPPARSRTGAFN 291
RIPT T+ T P P+A TE A A + L T P + V VP + +GA
Sbjct: 1362 RIPTAVTVGT--PSPSAPTPATEPALVPASASALATAPLMQPNVVISPVPSTLAASGAA- 1418
Query: 292 GPGVHT*SSPPDPCRYQLRTA 354
+ PP P + +L TA
Sbjct: 1419 -------APPPVPAKLELATA 1432
>02_05_0894 - 32585640-32585672,32585939-32585967,32586937-32588443
Length = 522
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Frame = +3
Query: 57 IMKVMYAFVMMSCA-LLVQAYPYNPYYGNVD--SLSYGSGDSNRGGL 188
+MK M F+ + + L+V AYP+ Y GN D SL Y N G L
Sbjct: 209 VMKPMLDFLAQTGSYLMVNAYPFFAYSGNADVISLDYALFRPNAGVL 255
>09_02_0626 + 11352690-11353078,11353106-11354006
Length = 429
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -2
Query: 461 WSTIRSFQWGQPVRSLEWG*RSGSLVA---EGNRLRFLVAVRSWYRQGSGGDD 312
W T+ F G R+ E + + + EG+ RF+ + S GSGGDD
Sbjct: 373 WRTLEDFPPGTEARAREQVREAANAIVSGFEGSAPRFISGLASDEESGSGGDD 425
>09_02_0495 + 9880714-9881196
Length = 160
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/36 (41%), Positives = 17/36 (47%)
Frame = +3
Query: 105 VQAYPYNPYYGNVDSLSYGSGDSNRGGLVMSRYYNP 212
V +YP P G+ S S G GD GGL Y P
Sbjct: 47 VNSYPPPPPAGSSSSSSSGGGDGGAGGLFGGTYPPP 82
>01_06_1341 - 36434098-36436080
Length = 660
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +3
Query: 261 ASPKPHRRLQRARCTYLIVAARPLPIPATYRNKKTKSITLSNQRTRSSAPLK 416
A P+ R+ R+RC + + P P PA N +++ S + R++A L+
Sbjct: 21 AGPRARPRVSRSRCVASLASQPPTPPPAN-ANHLVQTLCASGRLARAAALLQ 71
>01_06_0184 - 27282021-27282313,27284238-27285374,27285524-27285617
Length = 507
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = -3
Query: 559 PSSPWAPQLRVLPALVVRSGRRFGSLGNRYQSGGVQFDLFSGVSQFGRLSGA 404
PSSP P V A V + + +G V + F G++ FG ++GA
Sbjct: 370 PSSPSPPNAAVTVASVAATASLTDFAASAISAGAVANNQFQGLADFGLVAGA 421
>06_03_1382 -
29758759-29758806,29758888-29758943,29759901-29760000,
29760107-29760220,29760807-29760854,29760959-29761021,
29761237-29761439,29761518-29761578,29761685-29761790,
29761920-29761987,29762344-29762418,29762507-29762589,
29762788-29762953
Length = 396
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = -2
Query: 353 AVRSWYRQGSGGDDQVCTPGPLKAPVRLRAGGTERGHTT 237
A RS G GG V P P PVR R GT G T
Sbjct: 3 AHRSPAMVGGGGAGAVGPPSPATVPVRRRCEGTAMGAIT 41
>01_03_0082 - 12280109-12281068
Length = 319
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -1
Query: 327 VWRRRSGMYTWPVEGACAASGWRYRTR 247
V R S + WP+EG+ GW RTR
Sbjct: 229 VVREESIIAAWPMEGSSLGDGWLGRTR 255
>12_02_0643 - 21461123-21461902
Length = 259
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 263 GGTERGHTTXHSSGVVVRIVVTAHDQASSVTIA 165
G E GH+ ++ +V RIV AS++T A
Sbjct: 6 GSEEEGHSASEAASIVFRIVTVGLSLASAITTA 38
>09_06_0264 - 21929086-21931368
Length = 760
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +2
Query: 323 QTLADTSYVPQQENEVYYPQQPENPIFSPTQATELADPTEKI 448
+TLAD +P+ E E +P++ +SP+Q +PT +
Sbjct: 699 KTLADKLQMPEPEPEPEREPEPKSGPYSPSQEIVQGEPTATV 740
>08_02_1442 + 27120604-27120890,27121029-27121166,27121280-27121382,
27121877-27122036,27122927-27123114,27123203-27124770,
27124882-27125869,27126595-27127098,27127347-27127433,
27127753-27127821,27128012-27128041
Length = 1373
Score = 28.3 bits (60), Expect = 6.0
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = -3
Query: 535 LRVLPALVVRSGRRFGSLGNRYQSGGVQFDLFSGVSQFGRLSGAEDRVLWLLRVIDFVFL 356
+R LPAL R L R+Q GG F L V R AE+ W+ V + +
Sbjct: 1271 VRRLPALKSLMIRDCPFLVRRFQEGGEYFGLAPHVKLSQRQKAAEEAAGWMAPVFERLTG 1330
Query: 355 LRYVA 341
+R +A
Sbjct: 1331 IRALA 1335
>04_04_0872 + 28903099-28903644,28903739-28904544,28904620-28905004
Length = 578
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/23 (56%), Positives = 17/23 (73%), Gaps = 2/23 (8%)
Frame = +1
Query: 349 TATRKRSLLPSATREPDLQ--PH 411
T +++ SLLPS REPDL+ PH
Sbjct: 123 TLSKQNSLLPSRIREPDLELPPH 145
>01_03_0059 + 12109301-12109330,12109465-12109587,12109663-12110112
Length = 200
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -2
Query: 344 SWYRQGSGGDDQVCTPGPLKAPVRLRAGG 258
SWY GSG V P APV + AGG
Sbjct: 132 SWYASGSGVGRMVQVPAIDAAPVCIAAGG 160
>11_01_0106 - 792190-792730,793905-794018,794206-794540
Length = 329
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/49 (26%), Positives = 21/49 (42%)
Frame = -2
Query: 320 GDDQVCTPGPLKAPVRLRAGGTERGHTTXHSSGVVVRIVVTAHDQASSV 174
GD + C P L + GG RG + V++++ A D +V
Sbjct: 45 GDGECCLPPGLTTTTTVSGGGRRRGRKRVNRDNDNVKLLLQADDDQEAV 93
>10_07_0107 -
12936839-12937030,12937305-12937386,12937476-12937586,
12937667-12937918,12938004-12940237,12940328-12940525
Length = 1022
Score = 27.9 bits (59), Expect = 7.9
Identities = 18/55 (32%), Positives = 26/55 (47%)
Frame = +2
Query: 311 DRRRQTLADTSYVPQQENEVYYPQQPENPIFSPTQATELADPTEKIELYSTTLVP 475
D+ ++ L+D Y Q E +Y ENPI P + PT+ + TT VP
Sbjct: 393 DKYKEQLSDKIYA--QVKEHFYSLAAENPIAFPRLFPDSQQPTQSAQ--QTTNVP 443
>09_04_0751 + 19927164-19927835,19927926-19928663
Length = 469
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 637 LWVVRSHLLPRLPQEASSPVSSY*RQPSSPWAPQLRVL 524
LWVVR+ ++P+ ++ + R W PQL VL
Sbjct: 311 LWVVRASETSKIPEGFAAKAAKQGRGLIVTWCPQLEVL 348
>04_04_1410 +
33363784-33364086,33364221-33364280,33364388-33364464,
33365032-33365089,33365179-33365262,33365358-33365394,
33365855-33365924,33366655-33366849,33366947-33367039,
33367187-33367418,33367515-33367598,33368205-33368301,
33368510-33368577,33368662-33368739,33368823-33368945,
33369059-33369172,33369288-33369368
Length = 617
Score = 27.9 bits (59), Expect = 7.9
Identities = 10/32 (31%), Positives = 16/32 (50%)
Frame = -2
Query: 359 LVAVRSWYRQGSGGDDQVCTPGPLKAPVRLRA 264
+V + W+R G G + P P PV++ A
Sbjct: 43 VVILAVWFRSGGGAPPKAAAPPPRPPPVKIEA 74
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,205,420
Number of Sequences: 37544
Number of extensions: 407122
Number of successful extensions: 1484
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1476
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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