Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0925.Seq
(676 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.5
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.5
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.5
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.5
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.5
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.5
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.5
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 22 4.7
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 22 4.7
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 8.1
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = -3
Query: 578 WLNFLFFDWYILYMFMTHPG 519
W+ LF W + M+ PG
Sbjct: 294 WIKMLFLQWLPCLLRMSRPG 313
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = -3
Query: 578 WLNFLFFDWYILYMFMTHPG 519
W+ LF W + M+ PG
Sbjct: 294 WIKMLFLQWLPCLLRMSRPG 313
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = -3
Query: 578 WLNFLFFDWYILYMFMTHPG 519
W+ LF W + M+ PG
Sbjct: 294 WIKMLFLQWLPCLLRMSRPG 313
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = -3
Query: 578 WLNFLFFDWYILYMFMTHPG 519
W+ LF W + M+ PG
Sbjct: 294 WIKMLFLQWLPCLLRMSRPG 313
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = -3
Query: 578 WLNFLFFDWYILYMFMTHPG 519
W+ LF W + M+ PG
Sbjct: 294 WIKMLFLQWLPCLLRMSRPG 313
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = -3
Query: 578 WLNFLFFDWYILYMFMTHPG 519
W+ LF W + M+ PG
Sbjct: 294 WIKMLFLQWLPCLLRMSRPG 313
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = -3
Query: 578 WLNFLFFDWYILYMFMTHPG 519
W+ LF W + M+ PG
Sbjct: 362 WIKMLFLQWLPCLLRMSRPG 381
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.6 bits (46), Expect = 3.5
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = -3
Query: 578 WLNFLFFDWYILYMFMTHPG 519
W+ LF W + M+ PG
Sbjct: 362 WIKMLFLQWLPCLLRMSRPG 381
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 22.2 bits (45), Expect = 4.7
Identities = 5/24 (20%), Positives = 16/24 (66%)
Frame = -1
Query: 223 PSTV*CLSLIFNFILSMIVYYHRN 152
P+ + CL ++ ++ ++++HR+
Sbjct: 519 PAVISCLGIVATMAVACLLFHHRD 542
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 22.2 bits (45), Expect = 4.7
Identities = 5/24 (20%), Positives = 16/24 (66%)
Frame = -1
Query: 223 PSTV*CLSLIFNFILSMIVYYHRN 152
P+ + CL ++ ++ ++++HR+
Sbjct: 609 PAVISCLGIVATMAVACLLFHHRD 632
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.4 bits (43), Expect = 8.1
Identities = 12/26 (46%), Positives = 19/26 (73%)
Frame = +3
Query: 453 QLATMKFKLDWLISMVHNVVLYTRMG 530
+L+T+ F +LI M+ +V+YTRMG
Sbjct: 214 ELSTIIF---FLIPMLIILVVYTRMG 236
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,401
Number of Sequences: 438
Number of extensions: 3960
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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