Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0924.Seq
(712 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 135 2e-31
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 135 2e-31
AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing prot... 135 2e-31
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 135 2e-31
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 135 2e-31
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 133 5e-31
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 102 1e-21
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 135 bits (326), Expect = 2e-31
Identities = 58/68 (85%), Positives = 64/68 (94%)
Frame = +2
Query: 509 YRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVG 688
YRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VG
Sbjct: 143 YRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVG 202
Query: 689 YDDIGGCR 712
YDDIGGCR
Sbjct: 203 YDDIGGCR 210
Score = 133 bits (322), Expect = 5e-31
Identities = 59/85 (69%), Positives = 67/85 (78%)
Frame = +3
Query: 255 LLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 434
LLKGK+R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 435 PIDDSVEGLTGNLFEVYLKPYFMEA 509
PIDD+VEG+TGNLFEVYLKPYF+EA
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEA 142
Score = 86.6 bits (205), Expect = 8e-17
Identities = 42/63 (66%), Positives = 54/63 (85%)
Frame = +1
Query: 94 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVCSKANA 273
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTV K
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 274 ARK 282
R+
Sbjct: 64 RRE 66
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 135 bits (326), Expect = 2e-31
Identities = 58/68 (85%), Positives = 64/68 (94%)
Frame = +2
Query: 509 YRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVG 688
YRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VG
Sbjct: 143 YRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVG 202
Query: 689 YDDIGGCR 712
YDDIGGCR
Sbjct: 203 YDDIGGCR 210
Score = 133 bits (322), Expect = 5e-31
Identities = 59/85 (69%), Positives = 67/85 (78%)
Frame = +3
Query: 255 LLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 434
LLKGK+R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 435 PIDDSVEGLTGNLFEVYLKPYFMEA 509
PIDD+VEG+TGNLFEVYLKPYF+EA
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEA 142
Score = 86.6 bits (205), Expect = 8e-17
Identities = 42/63 (66%), Positives = 54/63 (85%)
Frame = +1
Query: 94 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVCSKANA 273
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTV K
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 274 ARK 282
R+
Sbjct: 64 RRE 66
>AF313485-1|AAG29873.1| 307|Homo sapiens valosin-containing protein
protein.
Length = 307
Score = 135 bits (326), Expect = 2e-31
Identities = 58/68 (85%), Positives = 64/68 (94%)
Frame = +2
Query: 509 YRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVG 688
YRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VG
Sbjct: 81 YRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVG 140
Query: 689 YDDIGGCR 712
YDDIGGCR
Sbjct: 141 YDDIGGCR 148
Score = 121 bits (291), Expect = 3e-27
Identities = 53/78 (67%), Positives = 60/78 (76%)
Frame = +3
Query: 276 KETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHILPIDDSVE 455
+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+LPIDD+VE
Sbjct: 3 REAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVE 62
Query: 456 GLTGNLFEVYLKPYFMEA 509
G+TGNLFEVYLKPYF+EA
Sbjct: 63 GITGNLFEVYLKPYFLEA 80
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 135 bits (326), Expect = 2e-31
Identities = 58/68 (85%), Positives = 64/68 (94%)
Frame = +2
Query: 509 YRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVG 688
YRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VG
Sbjct: 143 YRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVG 202
Query: 689 YDDIGGCR 712
YDDIGGCR
Sbjct: 203 YDDIGGCR 210
Score = 133 bits (322), Expect = 5e-31
Identities = 59/85 (69%), Positives = 67/85 (78%)
Frame = +3
Query: 255 LLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 434
LLKGK+R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 435 PIDDSVEGLTGNLFEVYLKPYFMEA 509
PIDD+VEG+TGNLFEVYLKPYF+EA
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEA 142
Score = 86.6 bits (205), Expect = 8e-17
Identities = 42/63 (66%), Positives = 54/63 (85%)
Frame = +1
Query: 94 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVCSKANA 273
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTV K
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 274 ARK 282
R+
Sbjct: 64 RRE 66
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 135 bits (326), Expect = 2e-31
Identities = 58/68 (85%), Positives = 64/68 (94%)
Frame = +2
Query: 509 YRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVG 688
YRPI + D F+VRGGMRAVEFKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VG
Sbjct: 143 YRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVG 202
Query: 689 YDDIGGCR 712
YDDIGGCR
Sbjct: 203 YDDIGGCR 210
Score = 133 bits (322), Expect = 5e-31
Identities = 59/85 (69%), Positives = 67/85 (78%)
Frame = +3
Query: 255 LLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 434
LLKGK+R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 435 PIDDSVEGLTGNLFEVYLKPYFMEA 509
PIDD+VEG+TGNLFEVYLKPYF+EA
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEA 142
Score = 86.6 bits (205), Expect = 8e-17
Identities = 42/63 (66%), Positives = 54/63 (85%)
Frame = +1
Query: 94 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVCSKANA 273
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTV K
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 274 ARK 282
R+
Sbjct: 64 RRE 66
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 133 bits (322), Expect = 5e-31
Identities = 59/85 (69%), Positives = 67/85 (78%)
Frame = +3
Query: 255 LLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 434
LLKGK+R+E VCIVLSDD C DEKIRM DV+SI PCP VKYGKR+H+L
Sbjct: 58 LLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVL 117
Query: 435 PIDDSVEGLTGNLFEVYLKPYFMEA 509
PIDD+VEG+TGNLFEVYLKPYF+EA
Sbjct: 118 PIDDTVEGITGNLFEVYLKPYFLEA 142
Score = 132 bits (319), Expect = 1e-30
Identities = 57/68 (83%), Positives = 63/68 (92%)
Frame = +2
Query: 509 YRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVG 688
YRPI + D F+VRGGMRAVEFKVVET PSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VG
Sbjct: 143 YRPIRKGDIFLVRGGMRAVEFKVVETHPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVG 202
Query: 689 YDDIGGCR 712
YDDIGGCR
Sbjct: 203 YDDIGGCR 210
Score = 86.6 bits (205), Expect = 8e-17
Identities = 42/63 (66%), Positives = 54/63 (85%)
Frame = +1
Query: 94 ADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVCSKANA 273
AD+K DDLSTAIL++K+RPNRLIV+EA+++DNSVV+LSQ KM++LQLFRGDTV K
Sbjct: 5 ADSKG-DDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKK 63
Query: 274 ARK 282
R+
Sbjct: 64 RRE 66
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 102 bits (245), Expect = 1e-21
Identities = 43/48 (89%), Positives = 47/48 (97%)
Frame = +2
Query: 569 FKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVGYDDIGGCR 712
FKVVETDPSP+CIVAPDTVIHC+GEPIKRE+EEE+LN VGYDDIGGCR
Sbjct: 1 FKVVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCR 48
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,812,745
Number of Sequences: 237096
Number of extensions: 2215509
Number of successful extensions: 4520
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4520
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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