Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0924.Seq
         (712 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF132553-1|AAD27852.1|  801|Drosophila melanogaster BcDNA.GM0288...   133   2e-31
AF047037-1|AAC27447.1|  801|Drosophila melanogaster transitional...   133   2e-31
AE013599-984|AAF58863.1|  801|Drosophila melanogaster CG2331-PA,...   133   2e-31
AF202034-1|AAF17568.1|  799|Drosophila melanogaster endoplasmic ...   129   4e-30
BT010235-1|AAQ23553.1|  424|Drosophila melanogaster RE52890p pro...    31   2.0  
AE014298-1761|AAN09307.1|  618|Drosophila melanogaster CG32651-P...    31   2.0  
AE014297-3237|AAF56066.1|  424|Drosophila melanogaster CG7023-PB...    31   2.0  
AE014297-3238|AAN13921.1|  364|Drosophila melanogaster CG7023-PA...    29   4.7  

>AF132553-1|AAD27852.1|  801|Drosophila melanogaster BcDNA.GM02885
           protein.
          Length = 801

 Score =  133 bits (322), Expect = 2e-31
 Identities = 61/85 (71%), Positives = 67/85 (78%)
 Frame = +3

Query: 255 LLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 434
           +LKGKRRKETVCIVLSDD CPDEKIRM            SDVVS+  CP VKYGKRV IL
Sbjct: 55  ILKGKRRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRIL 114

Query: 435 PIDDSVEGLTGNLFEVYLKPYFMEA 509
           PID+S EG+TGNLFE+YLKPYF+EA
Sbjct: 115 PIDESTEGVTGNLFEIYLKPYFLEA 139



 Score =  123 bits (297), Expect = 2e-28
 Identities = 53/68 (77%), Positives = 59/68 (86%)
 Frame = +2

Query: 509 YRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVG 688
           YRPIH  D F+VR  MR +EFKVV TDP P+CIVAP+TVI CDG+PIKREEEEE+LNAVG
Sbjct: 140 YRPIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVIFCDGDPIKREEEEESLNAVG 199

Query: 689 YDDIGGCR 712
           YDDIGGCR
Sbjct: 200 YDDIGGCR 207



 Score = 91.1 bits (216), Expect = 1e-18
 Identities = 45/64 (70%), Positives = 55/64 (85%)
 Frame = +1

Query: 91  MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVCSKAN 270
           MAD+K  +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRGDTV  K  
Sbjct: 1   MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGK 59

Query: 271 AARK 282
             ++
Sbjct: 60  RRKE 63


>AF047037-1|AAC27447.1|  801|Drosophila melanogaster transitional
           endoplasmic reticulumATPase TER94 protein.
          Length = 801

 Score =  133 bits (322), Expect = 2e-31
 Identities = 61/85 (71%), Positives = 67/85 (78%)
 Frame = +3

Query: 255 LLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 434
           +LKGKRRKETVCIVLSDD CPDEKIRM            SDVVS+  CP VKYGKRV IL
Sbjct: 55  ILKGKRRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRIL 114

Query: 435 PIDDSVEGLTGNLFEVYLKPYFMEA 509
           PID+S EG+TGNLFE+YLKPYF+EA
Sbjct: 115 PIDESTEGVTGNLFEIYLKPYFLEA 139



 Score =  123 bits (297), Expect = 2e-28
 Identities = 53/68 (77%), Positives = 59/68 (86%)
 Frame = +2

Query: 509 YRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVG 688
           YRPIH  D F+VR  MR +EFKVV TDP P+CIVAP+TVI CDG+PIKREEEEE+LNAVG
Sbjct: 140 YRPIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVIFCDGDPIKREEEEESLNAVG 199

Query: 689 YDDIGGCR 712
           YDDIGGCR
Sbjct: 200 YDDIGGCR 207



 Score = 91.1 bits (216), Expect = 1e-18
 Identities = 45/64 (70%), Positives = 55/64 (85%)
 Frame = +1

Query: 91  MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVCSKAN 270
           MAD+K  +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRGDTV  K  
Sbjct: 1   MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGK 59

Query: 271 AARK 282
             ++
Sbjct: 60  RRKE 63


>AE013599-984|AAF58863.1|  801|Drosophila melanogaster CG2331-PA,
           isoform A protein.
          Length = 801

 Score =  133 bits (322), Expect = 2e-31
 Identities = 61/85 (71%), Positives = 67/85 (78%)
 Frame = +3

Query: 255 LLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 434
           +LKGKRRKETVCIVLSDD CPDEKIRM            SDVVS+  CP VKYGKRV IL
Sbjct: 55  ILKGKRRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRIL 114

Query: 435 PIDDSVEGLTGNLFEVYLKPYFMEA 509
           PID+S EG+TGNLFE+YLKPYF+EA
Sbjct: 115 PIDESTEGVTGNLFEIYLKPYFLEA 139



 Score =  123 bits (297), Expect = 2e-28
 Identities = 53/68 (77%), Positives = 59/68 (86%)
 Frame = +2

Query: 509 YRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAVG 688
           YRPIH  D F+VR  MR +EFKVV TDP P+CIVAP+TVI CDG+PIKREEEEE+LNAVG
Sbjct: 140 YRPIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVIFCDGDPIKREEEEESLNAVG 199

Query: 689 YDDIGGCR 712
           YDDIGGCR
Sbjct: 200 YDDIGGCR 207



 Score = 91.1 bits (216), Expect = 1e-18
 Identities = 45/64 (70%), Positives = 55/64 (85%)
 Frame = +1

Query: 91  MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVCSKAN 270
           MAD+K  +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRGDTV  K  
Sbjct: 1   MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGK 59

Query: 271 AARK 282
             ++
Sbjct: 60  RRKE 63


>AF202034-1|AAF17568.1|  799|Drosophila melanogaster endoplasmic
           reticulum membranefusion protein protein.
          Length = 799

 Score =  129 bits (311), Expect = 4e-30
 Identities = 59/82 (71%), Positives = 64/82 (78%)
 Frame = +3

Query: 255 LLKGKRRKETVCIVLSDDNCPDEKIRMXXXXXXXXXXXXSDVVSIAPCPSVKYGKRVHIL 434
           +LKGKRRKETVCIVLSDD CPDEKIRM            SDVVS+  CP VKYGKRV IL
Sbjct: 55  ILKGKRRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRIL 114

Query: 435 PIDDSVEGLTGNLFEVYLKPYF 500
           PID+S EG+TGNLFE+YLKPYF
Sbjct: 115 PIDESTEGVTGNLFEIYLKPYF 136



 Score =  117 bits (281), Expect = 2e-26
 Identities = 51/69 (73%), Positives = 57/69 (82%)
 Frame = +2

Query: 506 GYRPIHRDDTFMVRGGMRAVEFKVVETDPSPFCIVAPDTVIHCDGEPIKREEEEEALNAV 685
           G   IH  D F+VR  MR +EFKVV TDP P+CIVAP+TVI CDG+PIKREEEEE+LNAV
Sbjct: 139 GLSAIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETVIFCDGDPIKREEEEESLNAV 198

Query: 686 GYDDIGGCR 712
           GYDDIGGCR
Sbjct: 199 GYDDIGGCR 207



 Score = 91.1 bits (216), Expect = 1e-18
 Identities = 45/64 (70%), Positives = 55/64 (85%)
 Frame = +1

Query: 91  MADNKSPDDLSTAILRRKDRPNRLIVEEAVSDDNSVVALSQAKMEQLQLFRGDTVCSKAN 270
           MAD+K  +DL+TAIL+RKDRPNRLIVEEA +DDNSVV+LSQAKM++LQLFRGDTV  K  
Sbjct: 1   MADSKG-EDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVILKGK 59

Query: 271 AARK 282
             ++
Sbjct: 60  RRKE 63


>BT010235-1|AAQ23553.1|  424|Drosophila melanogaster RE52890p
           protein.
          Length = 424

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +3

Query: 201 GTFTGQNGATSTLPW*HSLLKGKRRKETVCIVLSDDNCPDE 323
           G  TG NGA S   W H + +G    ET C+     +  DE
Sbjct: 209 GNGTGTNGANSEPTWVHEIFQGILTSETRCLNCETVSSKDE 249


>AE014298-1761|AAN09307.1|  618|Drosophila melanogaster CG32651-PA
           protein.
          Length = 618

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 2/79 (2%)
 Frame = +1

Query: 253 VCSKANA--ARKPFASCSQMIIALMRKFG*TVS*ETTFVCVFLMWYP*LRVLQ*NMENES 426
           +C K +   A+ P  +C + +      F  T+      V    +  P    L  N+ NES
Sbjct: 425 ICLKKSQLLAKCPDQNCQESLFMYNISFHLTIKHNNWLVKHLELNTPYTFQLDLNVTNES 484

Query: 427 TYCQLMIQLRVLLAIYSKY 483
             C  +IQL+ +L  YSKY
Sbjct: 485 VKCHAVIQLQNVLLEYSKY 503


>AE014297-3237|AAF56066.1|  424|Drosophila melanogaster CG7023-PB,
           isoform B protein.
          Length = 424

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +3

Query: 201 GTFTGQNGATSTLPW*HSLLKGKRRKETVCIVLSDDNCPDE 323
           G  TG NGA S   W H + +G    ET C+     +  DE
Sbjct: 209 GNGTGTNGANSEPTWVHEIFQGILTSETRCLNCETVSSKDE 249


>AE014297-3238|AAN13921.1|  364|Drosophila melanogaster CG7023-PA,
           isoform A protein.
          Length = 364

 Score = 29.5 bits (63), Expect = 4.7
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +3

Query: 210 TGQNGATSTLPW*HSLLKGKRRKETVCIVLSDDNCPDE 323
           TG NGA S   W H + +G    ET C+     +  DE
Sbjct: 152 TGTNGANSEPTWVHEIFQGILTSETRCLNCETVSSKDE 189


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,302,764
Number of Sequences: 53049
Number of extensions: 692319
Number of successful extensions: 2073
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2073
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)