Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0921X.Seq
(552 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical pr... 33 0.18
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 33 0.18
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 29 1.7
Z82278-6|CAB05258.1| 690|Caenorhabditis elegans Hypothetical pr... 29 2.2
Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical pr... 29 2.2
U41994-8|AAK31524.1| 752|Caenorhabditis elegans Hypothetical pr... 28 3.9
AC006677-1|AAF39948.1| 331|Caenorhabditis elegans Serpentine re... 28 3.9
Z81052-6|CAB02874.1| 336|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z78410-8|CAB01642.1| 556|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z78410-7|CAB01635.1| 652|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical pr... 28 5.1
U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical p... 28 5.1
U04995-1|AAA56868.1| 652|Caenorhabditis elegans prohormone conv... 28 5.1
AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical... 27 6.8
AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical... 27 6.8
AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical... 27 6.8
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 27 9.0
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 27 9.0
U88169-8|AAB42237.1| 866|Caenorhabditis elegans Holocentric chr... 27 9.0
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 27 9.0
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 27 9.0
AF321299-1|AAK07638.1| 866|Caenorhabditis elegans CENP-C-like p... 27 9.0
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 27 9.0
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 27 9.0
>Z71178-1|CAA94874.1| 297|Caenorhabditis elegans Hypothetical
protein B0024.1 protein.
Length = 297
Score = 32.7 bits (71), Expect = 0.18
Identities = 27/74 (36%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +1
Query: 304 RPGQFESKSR--RMGHPDHQGNAGPPSETRRGNNHTRRFQHEKPQERRGAP-ADARALQP 474
RPGQ + R G P QGNAG P R GN + + G+P A RA QP
Sbjct: 172 RPGQPGRRGNDGRPGQPGPQGNAGQPG--RDGNPGQPGHPGKDGRRGHGSPGAPGRAGQP 229
Query: 475 RRAHQHDLPPGPGD 516
R P PG+
Sbjct: 230 GRQGAPGNPGRPGE 243
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 32.7 bits (71), Expect = 0.18
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 2/91 (2%)
Frame = +2
Query: 239 RWSRSLIHPQVVMTGAH-IAYKYAPGNLRARAGEWDTQTIKEMLDHQVRLVEEIIIHEDF 415
R SLI P V+T AH A P + R G + + H+V V IH +
Sbjct: 83 RCGGSLIDPNFVLTAAHCFAKDRRPTSYSVRVGGHRSGSGSP---HRVTAVS---IHPWY 136
Query: 416 NTKSLKN-DVALLRMHAPFNLAEHINMICLP 505
N + D A++R+H P N + ICLP
Sbjct: 137 NIGFPSSYDFAIMRIHPPVNTSTTARPICLP 167
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +2
Query: 386 VEEIIIHEDFNTKSLKNDVALLRMHAPFNLAEHINMICL 502
V+E IH +N ++ ND+ALLR+ + + I +CL
Sbjct: 107 VKEAYIHSGYNNQTADNDIALLRISSDLSKL-GIKPVCL 144
>Z82278-6|CAB05258.1| 690|Caenorhabditis elegans Hypothetical
protein M162.7 protein.
Length = 690
Score = 29.1 bits (62), Expect = 2.2
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +2
Query: 353 IKEMLDHQVRLVEEIIIHEDFNTKSL----KNDVALLRMHAPFNLAEHINMICLPDRGTA 520
+KE +++ ++ + E + KS+ +N LL + AP N +++N I L + A
Sbjct: 507 MKENSNNKTLVMNALAFKESASIKSIISSVQNVYGLLDLEAPINQLKNVNSIVLEEIDKA 566
Query: 521 STPARTAS 544
PA+ S
Sbjct: 567 QDPAKLQS 574
>Z49938-2|CAA90187.1| 306|Caenorhabditis elegans Hypothetical
protein F38A3.1 protein.
Length = 306
Score = 29.1 bits (62), Expect = 2.2
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +1
Query: 340 GHPDHQGNAGPPSETRRGNNHTRRFQHEKPQERRG-APADARALQPRRAHQHDLPPGPGD 516
GHP G G P E+R Q G + D R QP +A Q P GPGD
Sbjct: 210 GHPGQDGQPGQPGESREVPGAPGPAGQPGSQGEPGPSGPDGRPGQPGQAGQ---PGGPGD 266
Query: 517 S 519
+
Sbjct: 267 A 267
>U41994-8|AAK31524.1| 752|Caenorhabditis elegans Hypothetical
protein F59A6.4 protein.
Length = 752
Score = 28.3 bits (60), Expect = 3.9
Identities = 10/34 (29%), Positives = 22/34 (64%)
Frame = +2
Query: 362 MLDHQVRLVEEIIIHEDFNTKSLKNDVALLRMHA 463
+LDH V +V+++ E++ K + D+ +L++ A
Sbjct: 116 LLDHDVYVVKDVEADEEYRMKVARKDLQILKIEA 149
>AC006677-1|AAF39948.1| 331|Caenorhabditis elegans Serpentine
receptor, class x protein26 protein.
Length = 331
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +2
Query: 374 QVRLVEEIIIHEDFNTKSLKNDVALLRMHAPFNLAEHINMIC 499
++RL +II +F + L + LR HA + + +N C
Sbjct: 286 EIRLSSPLIIDSNFQNQQLYRPLKYLRRHAFYKIFNKVNYKC 327
>Z81052-6|CAB02874.1| 336|Caenorhabditis elegans Hypothetical
protein D2023.7 protein.
Length = 336
Score = 27.9 bits (59), Expect = 5.1
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Frame = +1
Query: 340 GHPDHQGNAGPPSET-RRGNNHTRRFQHEKPQER---RGAPADARALQPRRAHQHDLPPG 507
G P G GPP + + G+N + E+P R RG P D+ P +D P G
Sbjct: 189 GRPGEMGPPGPPGDDGKPGSNGEKGQDVEQPTPRKGPRGPPGDSGPPGPEGDAGNDGPVG 248
>Z78410-8|CAB01642.1| 556|Caenorhabditis elegans Hypothetical
protein C51E3.7b protein.
Length = 556
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -2
Query: 158 DGHSDPHGVPVAASLQLRGVRLRLWHGFRYGI-SAADLHALLAVFFAEPDIQH 3
D H D HG Q+ GV L H F +G+ AA++ L + P H
Sbjct: 347 DNHRDSHGNCSHFEWQMNGVGLEYNHLFGFGVLDAAEMVMLAMAWKTSPPRYH 399
>Z78410-7|CAB01635.1| 652|Caenorhabditis elegans Hypothetical
protein C51E3.7a protein.
Length = 652
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -2
Query: 158 DGHSDPHGVPVAASLQLRGVRLRLWHGFRYGI-SAADLHALLAVFFAEPDIQH 3
D H D HG Q+ GV L H F +G+ AA++ L + P H
Sbjct: 443 DNHRDSHGNCSHFEWQMNGVGLEYNHLFGFGVLDAAEMVMLAMAWKTSPPRYH 495
>Z37983-4|CAA86057.1| 803|Caenorhabditis elegans Hypothetical
protein B0393.4 protein.
Length = 803
Score = 27.9 bits (59), Expect = 5.1
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +3
Query: 48 EICCTNPITEPVPKPQPDP 104
++ T P+ EPVP+P P+P
Sbjct: 107 KVAVTLPVPEPVPEPVPEP 125
>U42841-13|AAC48170.1| 682|Caenorhabditis elegans Hypothetical
protein T17H7.1 protein.
Length = 682
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/69 (23%), Positives = 25/69 (36%)
Frame = +1
Query: 307 PGQFESKSRRMGHPDHQGNAGPPSETRRGNNHTRRFQHEKPQERRGAPADARALQPRRAH 486
PG ++ R G + N GP GN +++ Q + + +
Sbjct: 237 PGTQDNNQRGSGERGQRQNFGPSDNLTNGNQFSKK-QFARGPSSMNSDLSENSQHSDSNS 295
Query: 487 QHDLPPGPG 513
Q D P GPG
Sbjct: 296 QFDFPRGPG 304
>U04995-1|AAA56868.1| 652|Caenorhabditis elegans prohormone
convertase 2 protein.
Length = 652
Score = 27.9 bits (59), Expect = 5.1
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = -2
Query: 158 DGHSDPHGVPVAASLQLRGVRLRLWHGFRYGI-SAADLHALLAVFFAEPDIQH 3
D H D HG Q+ GV L H F +G+ AA++ L + P H
Sbjct: 443 DNHRDSHGNCSHFEWQMNGVGLEYNHLFGFGVLDAAEMVMLAMAWKTSPPRYH 495
>AC084197-15|AAN63425.1| 391|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5c protein.
Length = 391
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +1
Query: 298 QVRPGQFESKSRRMGHPD-----HQGNAGPPSETRRGNNHTRRFQHEKPQERRGAPA 453
Q G+ E K R D H G++ S RR ++ RR + +ERR +PA
Sbjct: 196 QKEDGEPEKKKPRTSENDDKDKKHHGSSSSNSHRRREDDKDRRQSSDHHKERRRSPA 252
>AC084197-14|AAM44396.1| 526|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5b protein.
Length = 526
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +1
Query: 298 QVRPGQFESKSRRMGHPD-----HQGNAGPPSETRRGNNHTRRFQHEKPQERRGAPA 453
Q G+ E K R D H G++ S RR ++ RR + +ERR +PA
Sbjct: 331 QKEDGEPEKKKPRTSENDDKDKKHHGSSSSNSHRRREDDKDRRQSSDHHKERRRSPA 387
>AC084197-13|AAM44395.1| 571|Caenorhabditis elegans Hypothetical
protein Y73B6BL.5a protein.
Length = 571
Score = 27.5 bits (58), Expect = 6.8
Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 5/57 (8%)
Frame = +1
Query: 298 QVRPGQFESKSRRMGHPD-----HQGNAGPPSETRRGNNHTRRFQHEKPQERRGAPA 453
Q G+ E K R D H G++ S RR ++ RR + +ERR +PA
Sbjct: 376 QKEDGEPEKKKPRTSENDDKDKKHHGSSSSNSHRRREDDKDRRQSSDHHKERRRSPA 432
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 27.1 bits (57), Expect = 9.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 48 EICCTNPITEPVPKPQPDPSKL 113
+ C NP T+ P P P PS +
Sbjct: 1060 QACLFNPFTQSAPSPAPPPSTI 1081
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 27.1 bits (57), Expect = 9.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 48 EICCTNPITEPVPKPQPDPSKL 113
+ C NP T+ P P P PS +
Sbjct: 1054 QACLFNPFTQSAPSPAPPPSTI 1075
>U88169-8|AAB42237.1| 866|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 4 protein.
Length = 866
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +1
Query: 250 ESDTSSSRHDWCSHRLQVRPGQFESKSRRMGHPDHQGNAGPPSETRRGNNHT 405
E DT+ R ++ RP + SRR+G G S +RR N T
Sbjct: 677 EDDTNEMRSSSDEEEMEARPDPRKKSSRRLGLLSDSIALGLASSSRRRPNDT 728
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 27.1 bits (57), Expect = 9.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 48 EICCTNPITEPVPKPQPDPSKL 113
+ C NP T+ P P P PS +
Sbjct: 1060 QACLFNPFTQSAPSPAPPPSTI 1081
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 27.1 bits (57), Expect = 9.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 48 EICCTNPITEPVPKPQPDPSKL 113
+ C NP T+ P P P PS +
Sbjct: 1054 QACLFNPFTQSAPSPAPPPSTI 1075
>AF321299-1|AAK07638.1| 866|Caenorhabditis elegans CENP-C-like
protein HCP-4 protein.
Length = 866
Score = 27.1 bits (57), Expect = 9.0
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +1
Query: 250 ESDTSSSRHDWCSHRLQVRPGQFESKSRRMGHPDHQGNAGPPSETRRGNNHT 405
E DT+ R ++ RP + SRR+G G S +RR N T
Sbjct: 677 EDDTNEMRSSSDEEEMEARPDPRKKSSRRLGLLSDSIALGLASSSRRRPNDT 728
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 27.1 bits (57), Expect = 9.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 48 EICCTNPITEPVPKPQPDPSKL 113
+ C NP T+ P P P PS +
Sbjct: 1054 QACLFNPFTQSAPSPAPPPSTI 1075
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 27.1 bits (57), Expect = 9.0
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 48 EICCTNPITEPVPKPQPDPSKL 113
+ C NP T+ P P P PS +
Sbjct: 1060 QACLFNPFTQSAPSPAPPPSTI 1081
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,738,313
Number of Sequences: 27780
Number of extensions: 284020
Number of successful extensions: 1496
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1467
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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