Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0919.Seq
         (658 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L07518-1|AAB61945.1|  505|Homo sapiens mucin protein.                  34   0.51 
AK131274-1|BAD18451.1|  412|Homo sapiens protein ( Homo sapiens ...    30   6.3  

>L07518-1|AAB61945.1|  505|Homo sapiens mucin protein.
          Length = 505

 Score = 33.9 bits (74), Expect = 0.51
 Identities = 16/44 (36%), Positives = 22/44 (50%)
 Frame = +3

Query: 468 HVGPVPNSPYSESYTIHWPSFYNVVTGKTLALPNLIALQHIPPF 599
           H  P  +SP+S +  +   SF    T  T +LP    L H+PPF
Sbjct: 126 HSPPTGSSPFSSTGPMTATSFKTTTTYPTPSLPQTTPLTHVPPF 169


>AK131274-1|BAD18451.1|  412|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16218 fis, clone CTONG3001501, highly  similar
           to Mus musculus glucocorticoid-induced gene 1 mRNA. ).
          Length = 412

 Score = 30.3 bits (65), Expect = 6.3
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +3

Query: 384 KCLL*NAGCGVNALSGLQKHANSIYCRVHVGPVPNSPYSE 503
           KCL  N G  ++  +G+QKH  +I    H+G V +S YS+
Sbjct: 194 KCLWKNCGKVLSTAAGIQKHIRTI----HLGRVGDSDYSD 229


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,609,185
Number of Sequences: 237096
Number of extensions: 2203385
Number of successful extensions: 4734
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4734
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)