Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0919.Seq
         (658 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    23   3.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    23   3.4  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   7.8  

>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 144 PTQFYLFNLA 173
           PT +YLFNLA
Sbjct: 67  PTNYYLFNLA 76


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +3

Query: 216  YGKRCLLGRRWSWKGKNRLGYLLMEL 293
            YGK C  G R    GK R    L EL
Sbjct: 1275 YGKNCGKGERIDMNGKLRQSPRLKEL 1300


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 426 SGLQKHANSIYCRVHVGPVPNSPYSESYTIHW 521
           SGL  H N IY      P  NS    +Y ++W
Sbjct: 541 SGLS-HGNWIYPASMTIPGSNSAVFTNYKLYW 571


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,084
Number of Sequences: 438
Number of extensions: 4269
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)