Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0917.Seq
         (695 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    25   2.3  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           25   3.0  
AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein p...    25   3.0  
AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450 CY...    24   4.0  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    23   9.2  

>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +3

Query: 33  IVLFIIM-VSFGVSMQQSFRAQIWSQEWLDDPK 128
           + LF+++ V+ G  + QS  A +W+  W D  K
Sbjct: 11  VALFVLVTVALGQVVAQSEGAAVWAPTWADTLK 43


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = -2

Query: 406 LPKGFRTRISSDGRQYYDN 350
           LP+G+  R + +GR YY N
Sbjct: 163 LPRGWEERSAQNGRTYYVN 181


>AB090817-1|BAC57909.1|  344|Anopheles gambiae gag-like protein
           protein.
          Length = 344

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +2

Query: 203 ERKLRPRNRQTILPFQDCPTSQILKYLRHI*MVQSD 310
           +++ +PR R   L   DC + ++ K L+   M QSD
Sbjct: 108 KKQNKPRKRPEALLISDCTSEELAKLLKE--MKQSD 141


>AY176051-1|AAO19582.1|  522|Anopheles gambiae cytochrome P450
           CYP12F1 protein.
          Length = 522

 Score = 24.2 bits (50), Expect = 4.0
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = -2

Query: 367 RQYYDNLIN--GLLDRGIEPMVTLYHSDMPKIFQDLGGWAI 251
           RQ Y +LI   G+  R  + +VT    D  K+F+  G W I
Sbjct: 78  RQDYGDLIRIKGMFGRP-DIVVTFQPEDFAKVFRTEGAWPI 117


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 655 IAFPEMVQVRGGHVVVPDRRVLEC 584
           +  P+ V   GG VVVP    L+C
Sbjct: 429 VTLPQPVTAAGGGVVVPFTPGLQC 452


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 776,031
Number of Sequences: 2352
Number of extensions: 16239
Number of successful extensions: 19
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 70668195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)