Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0914.Seq
         (738 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68117-2|CAA92178.1|  333|Caenorhabditis elegans Hypothetical pr...    31   1.1  
AL021474-2|CAA16309.3|  655|Caenorhabditis elegans Hypothetical ...    30   1.5  
Z66521-19|CAA91404.2|  217|Caenorhabditis elegans Hypothetical p...    29   3.4  
AL031269-4|CAA20335.2|  217|Caenorhabditis elegans Hypothetical ...    29   3.4  
AF303256-1|AAG50214.1|  217|Caenorhabditis elegans 2L737 protein.      29   3.4  
U23517-11|AAY44017.1|  288|Caenorhabditis elegans Hypothetical p...    29   4.5  

>Z68117-2|CAA92178.1|  333|Caenorhabditis elegans Hypothetical
           protein F45E6.4 protein.
          Length = 333

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 109 CPSVNSFKFQLCNHTPPGVQNLWFPGSCPPSHCSN 5
           CP  ++F F  C     G++  +FPG+CP   CS+
Sbjct: 203 CPCQHAFAFPAC-----GMETGFFPGTCPEMTCSS 232


>AL021474-2|CAA16309.3|  655|Caenorhabditis elegans Hypothetical
           protein Y32F6A.3 protein.
          Length = 655

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
 Frame = -1

Query: 198 AVNLSILPVSGPGEISRVESN*AAGSTPGG-ALPSIPLSFSFATILPPESKIFGFPEAAR 22
           A N S+   S P  + R  S  +  +TP G A P  PLS S +    P+S   G P + +
Sbjct: 513 ATNTSVSS-STPRSVVRTTSTSSVPTTPTGLAAPKTPLSASVSATNEPDSTTNGTPLSRK 571

Query: 21  RAI 13
           R++
Sbjct: 572 RSM 574


>Z66521-19|CAA91404.2|  217|Caenorhabditis elegans Hypothetical
           protein VW02B12L.4 protein.
          Length = 217

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 549 WGIIANPNPQHEGVQR 502
           WG+IA P PQH+ ++R
Sbjct: 29  WGMIARPEPQHDSLKR 44


>AL031269-4|CAA20335.2|  217|Caenorhabditis elegans Hypothetical
           protein VW02B12L.4 protein.
          Length = 217

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 549 WGIIANPNPQHEGVQR 502
           WG+IA P PQH+ ++R
Sbjct: 29  WGMIARPEPQHDSLKR 44


>AF303256-1|AAG50214.1|  217|Caenorhabditis elegans 2L737 protein.
          Length = 217

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -1

Query: 549 WGIIANPNPQHEGVQR 502
           WG+IA P PQH+ ++R
Sbjct: 29  WGMIARPEPQHDSLKR 44


>U23517-11|AAY44017.1|  288|Caenorhabditis elegans Hypothetical
           protein D1022.9 protein.
          Length = 288

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 114 QEWSLRLNLTQHGKSHQARTPEGLTD*QLFLD 209
           Q W L L    H K + ARTP  + D ++F++
Sbjct: 59  QYWPLMLARFSHEKPYVARTPAAIADAEMFIN 90


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,022,632
Number of Sequences: 27780
Number of extensions: 405349
Number of successful extensions: 1068
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 993
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)