Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0913.Seq
         (665 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB051515-1|BAB21819.1| 1644|Homo sapiens KIAA1728 protein protein.     30   6.5  
BC056909-1|AAH56909.1|  363|Homo sapiens PSRC1 protein protein.        30   8.5  

>AB051515-1|BAB21819.1| 1644|Homo sapiens KIAA1728 protein protein.
          Length = 1644

 Score = 30.3 bits (65), Expect = 6.5
 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = -2

Query: 238  VSESGVNQPPAPSTNTQSACCSSARNPALITND-SIGLPSCALMMCGEVGS 89
            +S S V    AP      A CS  R+PA +T+  S G PS ++ M     S
Sbjct: 1414 LSHSSVAVDAAPPNQGGLATCSDVRHPASLTSSGSSGSPSSSIKMSSSTSS 1464


>BC056909-1|AAH56909.1|  363|Homo sapiens PSRC1 protein protein.
          Length = 363

 Score = 29.9 bits (64), Expect = 8.5
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -1

Query: 386 HRSPPNPPESVRRVVLPVQSTS 321
           H SPP PP  +R V+ P  STS
Sbjct: 237 HPSPPGPPTPIRSVLAPQPSTS 258


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,433,269
Number of Sequences: 237096
Number of extensions: 2444066
Number of successful extensions: 9842
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9840
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7535049140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)