Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0911.Seq
(704 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81517-3|CAB04210.1| 802|Caenorhabditis elegans Hypothetical pr... 29 2.4
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 29 3.2
U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical pr... 29 3.2
EF584656-1|ABQ57414.1| 500|Caenorhabditis elegans LAD-2 short i... 29 4.3
EF584655-1|ABQ57413.1| 1187|Caenorhabditis elegans LAD-2 long is... 29 4.3
AF456361-1|AAL60232.1| 1187|Caenorhabditis elegans immunoglobuli... 29 4.3
AC024817-51|AAP68914.1| 496|Caenorhabditis elegans L1 cam adhes... 29 4.3
AC024817-49|AAF59572.3| 1187|Caenorhabditis elegans L1 cam adhes... 29 4.3
AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical ... 28 7.5
U97009-11|AAC69026.1| 533|Caenorhabditis elegans Udp-glucuronos... 27 9.9
U97009-10|AAC69033.1| 533|Caenorhabditis elegans Udp-glucuronos... 27 9.9
>Z81517-3|CAB04210.1| 802|Caenorhabditis elegans Hypothetical
protein F28B1.3 protein.
Length = 802
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 666 AVEIQFDVPHSCTKLIFSIFYFHQRFWVSKNRKAKCRK 553
AVEI+F P +++ S F RF+ K C+K
Sbjct: 138 AVEIKFQTPFEAKQIVMSFFSMITRFFPKKKWTNDCKK 175
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 324 RSRCA*PPHPPRLMRRYRARQVALFGEMCAEPLFVYFSKYIQICIRS*DNNPDKCFNNIL 503
R RC PP + ++ +Q A GE C+E V S + +C +NN KC NN++
Sbjct: 621 RGRCECPPRMSAIDKKCVHQQTAAPGEPCSEK--VACSPF-SVC----ENNVCKCVNNMM 673
>U28735-9|AAM69113.1| 1299|Caenorhabditis elegans Hypothetical
protein F48E3.8b protein.
Length = 1299
Score = 29.1 bits (62), Expect = 3.2
Identities = 20/60 (33%), Positives = 30/60 (50%)
Frame = +3
Query: 324 RSRCA*PPHPPRLMRRYRARQVALFGEMCAEPLFVYFSKYIQICIRS*DNNPDKCFNNIL 503
R RC PP + ++ +Q A GE C+E V S + +C +NN KC NN++
Sbjct: 621 RGRCECPPRMSAIDKKCVHQQTAAPGEPCSEK--VACSPF-SVC----ENNVCKCVNNMM 673
>EF584656-1|ABQ57414.1| 500|Caenorhabditis elegans LAD-2 short
isoform protein.
Length = 500
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +1
Query: 409 ARNPYLFIFLNTFKYVSAHETITLINASIIY*KESMSIQHFRVALIPFFAAFCLPVFAHP 588
A NP ++F N F +V AH + A+ +H++V L C V A P
Sbjct: 406 ASNPLGYVFANAFVHVRAHAPFFRMPAA----------RHWKVVLHSTVVLDC-DVDAAP 454
Query: 589 ETLVKVKDAEDQ 624
E +V+ DA+D+
Sbjct: 455 EAMVRWVDADDR 466
>EF584655-1|ABQ57413.1| 1187|Caenorhabditis elegans LAD-2 long
isoform protein.
Length = 1187
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +1
Query: 409 ARNPYLFIFLNTFKYVSAHETITLINASIIY*KESMSIQHFRVALIPFFAAFCLPVFAHP 588
A NP ++F N F +V AH + A+ +H++V L C V A P
Sbjct: 406 ASNPLGYVFANAFVHVRAHAPFFRMPAA----------RHWKVVLHSTVVLDC-DVDAAP 454
Query: 589 ETLVKVKDAEDQ 624
E +V+ DA+D+
Sbjct: 455 EAMVRWVDADDR 466
>AF456361-1|AAL60232.1| 1187|Caenorhabditis elegans immunoglobulin
domain-containingprotein Y54G2A.25 protein.
Length = 1187
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +1
Query: 409 ARNPYLFIFLNTFKYVSAHETITLINASIIY*KESMSIQHFRVALIPFFAAFCLPVFAHP 588
A NP ++F N F +V AH + A+ +H++V L C V A P
Sbjct: 406 ASNPLGYVFANAFVHVRAHAPFFRMPAA----------RHWKVVLHSTVVLDC-DVDAAP 454
Query: 589 ETLVKVKDAEDQ 624
E +V+ DA+D+
Sbjct: 455 EAMVRWVDADDR 466
>AC024817-51|AAP68914.1| 496|Caenorhabditis elegans L1 cam adhesion
molecule homologprotein 2, isoform b protein.
Length = 496
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +1
Query: 409 ARNPYLFIFLNTFKYVSAHETITLINASIIY*KESMSIQHFRVALIPFFAAFCLPVFAHP 588
A NP ++F N F +V AH + A+ +H++V L C V A P
Sbjct: 406 ASNPLGYVFANAFVHVRAHAPFFRMPAA----------RHWKVVLHSTVVLDC-DVDAAP 454
Query: 589 ETLVKVKDAEDQ 624
E +V+ DA+D+
Sbjct: 455 EAMVRWVDADDR 466
>AC024817-49|AAF59572.3| 1187|Caenorhabditis elegans L1 cam adhesion
molecule homologprotein 2, isoform a protein.
Length = 1187
Score = 28.7 bits (61), Expect = 4.3
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +1
Query: 409 ARNPYLFIFLNTFKYVSAHETITLINASIIY*KESMSIQHFRVALIPFFAAFCLPVFAHP 588
A NP ++F N F +V AH + A+ +H++V L C V A P
Sbjct: 406 ASNPLGYVFANAFVHVRAHAPFFRMPAA----------RHWKVVLHSTVVLDC-DVDAAP 454
Query: 589 ETLVKVKDAEDQ 624
E +V+ DA+D+
Sbjct: 455 EAMVRWVDADDR 466
>AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical
protein Y53G8AM.4 protein.
Length = 309
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 480 DKCFNNILKGEYEYSTFPCRPYSLFCG 560
D+C N ILK + EYST + + +FCG
Sbjct: 264 DECCNTILKKKSEYST---KYFCVFCG 287
>U97009-11|AAC69026.1| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein9, isoform a protein.
Length = 533
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 535 HGNVEYSYSPFNILLKHLSGLLSHERIHI*MY 440
HG+ + PF+I LK+ GL+ ++ I I Y
Sbjct: 46 HGHNVTVFQPFHIALKNTDGLIKNKNIEIINY 77
>U97009-10|AAC69033.1| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein11 protein.
Length = 533
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -2
Query: 535 HGNVEYSYSPFNILLKHLSGLLSHERIHI*MY 440
HG + PF++ LK+L G++ ++ I I Y
Sbjct: 46 HGQEVTLFQPFHLALKNLDGIVKNKNIEIINY 77
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,029,144
Number of Sequences: 27780
Number of extensions: 313011
Number of successful extensions: 825
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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