Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0909.Seq
(693 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060647-1|AAL28195.1| 445|Drosophila melanogaster GH07831p pro... 119 4e-27
AE014134-1051|AAN10579.1| 445|Drosophila melanogaster CG9175-PB... 119 4e-27
AE014134-1050|AAF52344.1| 445|Drosophila melanogaster CG9175-PA... 119 4e-27
AE013599-3329|AAF46798.2| 1056|Drosophila melanogaster CG11073-P... 29 4.5
AY052030-1|AAK93454.1| 1422|Drosophila melanogaster LD47893p pro... 29 6.0
AF104401-1|AAF14115.1| 1827|Drosophila melanogaster SPT6 protein... 29 6.0
AF104400-1|AAF14114.1| 1831|Drosophila melanogaster SPT6 protein... 29 6.0
AE014298-861|AAF46140.1| 1831|Drosophila melanogaster CG12225-PA... 29 6.0
AF156227-1|AAD43809.1| 258|Drosophila melanogaster salivary gla... 29 7.9
>AY060647-1|AAL28195.1| 445|Drosophila melanogaster GH07831p
protein.
Length = 445
Score = 119 bits (286), Expect = 4e-27
Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
Frame = -1
Query: 507 LTVRDDGRFVGVGTMFSGSVDIYIAFSLQRVLHVRSAHRMFVTGVQFLPVRG-YGPAVAS 331
L VRDDGRFV VGTMFSGSV +YIAFSLQRVLH+ AH MFVTG+QFLP+ GP ++S
Sbjct: 335 LAVRDDGRFVAVGTMFSGSVSMYIAFSLQRVLHIPHAHSMFVTGLQFLPITNEEGPPISS 394
Query: 330 RSEAALLSISVDNCLCVHSL 271
+EAA+LSISVDN +C+HSL
Sbjct: 395 DTEAAVLSISVDNKVCIHSL 414
Score = 59.3 bits (137), Expect = 5e-09
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = -2
Query: 650 EDKEDAHRMFTIANPLSRSGKQKGLLQLWDPKDGSLRKTVLVNESLS 510
E ++D +R+FTIANPL + GKQ+G LQ WD G LR+ V ++ESLS
Sbjct: 287 EAQKDNYRLFTIANPLGKVGKQRGFLQHWDCASGQLRQAVAIDESLS 333
Score = 39.5 bits (88), Expect = 0.004
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -3
Query: 262 RLRPIWIAIVLIIFVLFCTFSLCSYLGI 179
R P WIAIV +I ++F F LCSY+GI
Sbjct: 418 RTIPAWIAIVFLIVMIFAVFVLCSYIGI 445
>AE014134-1051|AAN10579.1| 445|Drosophila melanogaster CG9175-PB,
isoform B protein.
Length = 445
Score = 119 bits (286), Expect = 4e-27
Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
Frame = -1
Query: 507 LTVRDDGRFVGVGTMFSGSVDIYIAFSLQRVLHVRSAHRMFVTGVQFLPVRG-YGPAVAS 331
L VRDDGRFV VGTMFSGSV +YIAFSLQRVLH+ AH MFVTG+QFLP+ GP ++S
Sbjct: 335 LAVRDDGRFVAVGTMFSGSVSMYIAFSLQRVLHIPHAHSMFVTGLQFLPITNEEGPPISS 394
Query: 330 RSEAALLSISVDNCLCVHSL 271
+EAA+LSISVDN +C+HSL
Sbjct: 395 DTEAAVLSISVDNKVCIHSL 414
Score = 59.3 bits (137), Expect = 5e-09
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = -2
Query: 650 EDKEDAHRMFTIANPLSRSGKQKGLLQLWDPKDGSLRKTVLVNESLS 510
E ++D +R+FTIANPL + GKQ+G LQ WD G LR+ V ++ESLS
Sbjct: 287 EAQKDNYRLFTIANPLGKVGKQRGFLQHWDCASGQLRQAVAIDESLS 333
Score = 39.5 bits (88), Expect = 0.004
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -3
Query: 262 RLRPIWIAIVLIIFVLFCTFSLCSYLGI 179
R P WIAIV +I ++F F LCSY+GI
Sbjct: 418 RTIPAWIAIVFLIVMIFAVFVLCSYIGI 445
>AE014134-1050|AAF52344.1| 445|Drosophila melanogaster CG9175-PA,
isoform A protein.
Length = 445
Score = 119 bits (286), Expect = 4e-27
Identities = 57/80 (71%), Positives = 67/80 (83%), Gaps = 1/80 (1%)
Frame = -1
Query: 507 LTVRDDGRFVGVGTMFSGSVDIYIAFSLQRVLHVRSAHRMFVTGVQFLPVRG-YGPAVAS 331
L VRDDGRFV VGTMFSGSV +YIAFSLQRVLH+ AH MFVTG+QFLP+ GP ++S
Sbjct: 335 LAVRDDGRFVAVGTMFSGSVSMYIAFSLQRVLHIPHAHSMFVTGLQFLPITNEEGPPISS 394
Query: 330 RSEAALLSISVDNCLCVHSL 271
+EAA+LSISVDN +C+HSL
Sbjct: 395 DTEAAVLSISVDNKVCIHSL 414
Score = 59.3 bits (137), Expect = 5e-09
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = -2
Query: 650 EDKEDAHRMFTIANPLSRSGKQKGLLQLWDPKDGSLRKTVLVNESLS 510
E ++D +R+FTIANPL + GKQ+G LQ WD G LR+ V ++ESLS
Sbjct: 287 EAQKDNYRLFTIANPLGKVGKQRGFLQHWDCASGQLRQAVAIDESLS 333
Score = 39.5 bits (88), Expect = 0.004
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = -3
Query: 262 RLRPIWIAIVLIIFVLFCTFSLCSYLGI 179
R P WIAIV +I ++F F LCSY+GI
Sbjct: 418 RTIPAWIAIVFLIVMIFAVFVLCSYIGI 445
>AE013599-3329|AAF46798.2| 1056|Drosophila melanogaster CG11073-PA
protein.
Length = 1056
Score = 29.5 bits (63), Expect = 4.5
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 400 APHVQHALQTEGDVNVDGATEHGPDAHEAAVVP 498
AP Q Q + ++N DG +HG +AH P
Sbjct: 447 APTAQLQAQPQDNLNNDGPADHGTNAHVGTTTP 479
>AY052030-1|AAK93454.1| 1422|Drosophila melanogaster LD47893p
protein.
Length = 1422
Score = 29.1 bits (62), Expect = 6.0
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 370 LHARHEHP-VRAPHVQHALQTEGDVNVD---GATEHGPDAHEAAVVPDGQPDSD 519
L+ HE P ++A + A+Q + A E+G DA EA VVP+ + D D
Sbjct: 50 LNYSHELPRMQAEQRRKAIQERREAKARRQAAAAENGDDAAEAIVVPEPEDDDD 103
>AF104401-1|AAF14115.1| 1827|Drosophila melanogaster SPT6 protein
protein.
Length = 1827
Score = 29.1 bits (62), Expect = 6.0
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 370 LHARHEHP-VRAPHVQHALQTEGDVNVD---GATEHGPDAHEAAVVPDGQPDSD 519
L+ HE P ++A + A+Q + A E+G DA EA VVP+ + D D
Sbjct: 455 LNYSHELPRMQAEQRRKAIQERREAKARRQAAAAENGDDAAEAIVVPEPEDDDD 508
>AF104400-1|AAF14114.1| 1831|Drosophila melanogaster SPT6 protein
protein.
Length = 1831
Score = 29.1 bits (62), Expect = 6.0
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 370 LHARHEHP-VRAPHVQHALQTEGDVNVD---GATEHGPDAHEAAVVPDGQPDSD 519
L+ HE P ++A + A+Q + A E+G DA EA VVP+ + D D
Sbjct: 459 LNYSHELPRMQAEQRRKAIQERREAKARRQAAAAENGDDAAEAIVVPEPEDDDD 512
>AE014298-861|AAF46140.1| 1831|Drosophila melanogaster CG12225-PA
protein.
Length = 1831
Score = 29.1 bits (62), Expect = 6.0
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +1
Query: 370 LHARHEHP-VRAPHVQHALQTEGDVNVD---GATEHGPDAHEAAVVPDGQPDSD 519
L+ HE P ++A + A+Q + A E+G DA EA VVP+ + D D
Sbjct: 459 LNYSHELPRMQAEQRRKAIQERREAKARRQAAAAENGDDAAEAIVVPEPEDDDD 512
>AF156227-1|AAD43809.1| 258|Drosophila melanogaster salivary gland
secretion protein protein.
Length = 258
Score = 28.7 bits (61), Expect = 7.9
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = +2
Query: 338 TAGPYPRTGRNCTPVTNIRCALLTCSTRCKLKAM*MS---TEPLNMVPTPT 481
T P P TP T CAL T +T+C + S T P++ T T
Sbjct: 198 TTTPTPTCSTQGTPTTPCTCALTTTTTKCTTTSSTCSPSTTTPISKTTTST 248
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,346,491
Number of Sequences: 53049
Number of extensions: 469172
Number of successful extensions: 1751
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1748
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -