Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0904.Seq
         (711 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismuta...    28   0.33 
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   4.1  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    24   5.4  
U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   7.2  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   7.2  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.5  
AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative acetyltr...    23   9.5  

>AY524130-1|AAS17758.1|  211|Anopheles gambiae superoxide dismutase
           2 protein.
          Length = 211

 Score = 27.9 bits (59), Expect = 0.33
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -2

Query: 296 GGQRRPNPPLRGAPHRLVRHL-DEGNIGGGSHG 201
           GG   P+    GAP+  VRH+ D GNI    +G
Sbjct: 80  GGHYNPDKVSHGAPNDQVRHVGDLGNIAADENG 112


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 695 QVEVECDTTRINMHYINDVP 636
           QV+     + IN+HY+ND P
Sbjct: 686 QVDGSSGASAINIHYLNDRP 705


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 25/72 (34%), Positives = 31/72 (43%)
 Frame = +2

Query: 50  RNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGSPYAADKRRGYHRQYFP 229
           R  P +  RS   G+A +   V GE+G +  G  G  G+P    P   D   G      P
Sbjct: 310 RGEPGEPGRSGEKGQAGDRGQV-GERGHK--GEKGLPGQP---GPRGRDGNFG--PVGLP 361

Query: 230 RQGGGRGGEELH 265
            Q G RG E LH
Sbjct: 362 GQKGDRGSEGLH 373


>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 242 RHLDEGNIGGGSHGAC 195
           R  +EG  G GSHG C
Sbjct: 346 RIANEGGTGCGSHGCC 361


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -2

Query: 242 RHLDEGNIGGGSHGAC 195
           R  +EG  G GSHG C
Sbjct: 346 RIANEGGTGCGSHGCC 361


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
 Frame = +2

Query: 119 GEKGFEXAGVTGPGGEPVKGSPYAADKRRGYHRQYF-PRQGGGRGG 253
           G  G    G  G  G P  G       R   HR     R+GGG GG
Sbjct: 206 GSGGGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNGG 251



 Score = 23.0 bits (47), Expect = 9.5
 Identities = 14/41 (34%), Positives = 18/41 (43%)
 Frame = +2

Query: 140 AGVTGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRGGEEL 262
           +G  GPGG    G      + R   R+     GGG GG +L
Sbjct: 219 SGGPGPGGGGGGGGRDRDHRDRDREREGGGNGGGGGGGMQL 259


>AJ439060-14|CAD27765.1|  471|Anopheles gambiae putative
           acetyltransferase protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +3

Query: 567 PVGTTIETTTNESQA*TSRGRYVWHIIYVVHVDSSCVTL 683
           PVG+T+E  T          + +W+I  +V+  +S VTL
Sbjct: 411 PVGSTLEVETGPPPEKLCVDQLIWNIRNIVYNQTS-VTL 448


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 695,204
Number of Sequences: 2352
Number of extensions: 12640
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)