Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0904.Seq
(711 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein. 119 1e-26
X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein... 119 1e-26
M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-bindi... 119 1e-26
L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A pro... 119 1e-26
BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain prote... 119 1e-26
BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein. 119 1e-26
BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain prote... 119 1e-26
BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain prote... 119 1e-26
AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant pr... 119 1e-26
BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein. 118 3e-26
M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive elemen... 117 4e-26
M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein. 117 4e-26
M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-bindi... 117 4e-26
L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens db... 117 4e-26
BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1... 117 4e-26
BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1... 117 4e-26
BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1... 117 4e-26
BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein. 117 4e-26
BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1... 117 4e-26
BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1... 117 4e-26
BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1... 117 4e-26
BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1... 117 4e-26
BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for IM... 117 4e-26
BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1... 117 4e-26
BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1... 117 4e-26
BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1... 117 4e-26
BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein. 117 4e-26
J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein. 117 5e-26
BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2... 114 3e-25
BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2... 114 3e-25
AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-bo... 114 3e-25
DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein. 109 7e-24
AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-bo... 93 1e-18
Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C. eleg... 48 3e-05
DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein. 48 3e-05
BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for IM... 48 3e-05
BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for IM... 48 3e-05
BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein. 48 3e-05
BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein. 48 3e-05
BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein. 48 3e-05
AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C. el... 48 3e-05
AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens ... 48 3e-05
BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein. 45 2e-04
AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C. ele... 45 2e-04
AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens ... 45 2e-04
AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN... 45 2e-04
BC009737-1|AAH09737.1| 404|Homo sapiens ubiquitin-activating en... 32 1.8
AY253672-1|AAP79600.1| 404|Homo sapiens ThiFP1 protein. 32 1.8
AL136757-1|CAB66691.1| 404|Homo sapiens hypothetical protein pr... 32 1.8
AK026904-1|BAB15587.1| 404|Homo sapiens protein ( Homo sapiens ... 32 1.8
AB154406-1|BAD15375.1| 404|Homo sapiens Ubiquitin activating en... 32 1.8
DQ323928-1|ABC54712.1| 410|Homo sapiens Spred3 protein. 32 2.3
AB002367-1|BAA20824.2| 794|Homo sapiens KIAA0369 protein. 31 3.1
Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen... 31 5.4
X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1 p... 31 5.4
K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein. 31 5.4
BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha... 31 5.4
AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen... 31 5.4
AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain ... 31 5.4
BC000527-1|AAH00527.1| 354|Homo sapiens EWSR1 protein protein. 30 9.4
AK125874-1|BAC86330.1| 243|Homo sapiens protein ( Homo sapiens ... 30 9.4
>X95325-1|CAA64631.1| 372|Homo sapiens DNA-binding protein protein.
Length = 372
Score = 119 bits (286), Expect = 1e-26
Identities = 58/80 (72%), Positives = 64/80 (80%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGP G PV+GS
Sbjct: 109 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGS 168
Query: 182 PYAADKRRGYHRQYFPRQGG 241
YAAD+RR Y R Y+ R+ G
Sbjct: 169 RYAADRRR-YRRGYYGRRRG 187
>X72712-1|CAA51261.1| 372|Homo sapiens cold shock domain protein A
protein.
Length = 372
Score = 119 bits (286), Expect = 1e-26
Identities = 58/80 (72%), Positives = 64/80 (80%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGP G PV+GS
Sbjct: 109 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGS 168
Query: 182 PYAADKRRGYHRQYFPRQGG 241
YAAD+RR Y R Y+ R+ G
Sbjct: 169 RYAADRRR-YRRGYYGRRRG 187
>M24069-1|AAA35749.1| 412|Homo sapiens protein ( Human DNA-binding
protein A (dbpA) gene, 3' end. ).
Length = 412
Score = 119 bits (286), Expect = 1e-26
Identities = 58/80 (72%), Positives = 64/80 (80%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGP G PV+GS
Sbjct: 179 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGS 238
Query: 182 PYAADKRRGYHRQYFPRQGG 241
YAAD+RR Y R Y+ R+ G
Sbjct: 239 RYAADRRR-YRRGYYGRRRG 257
>L29071-1|AAA79243.1| 342|Homo sapiens DNA-binding protein A
protein.
Length = 342
Score = 119 bits (286), Expect = 1e-26
Identities = 58/80 (72%), Positives = 64/80 (80%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGP G PV+GS
Sbjct: 109 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGS 168
Query: 182 PYAADKRRGYHRQYFPRQGG 241
YAAD+RR Y R Y+ R+ G
Sbjct: 169 RYAADRRR-YRRGYYGRRRG 187
>BC021926-1|AAH21926.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 119 bits (286), Expect = 1e-26
Identities = 58/80 (72%), Positives = 64/80 (80%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGP G PV+GS
Sbjct: 109 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGS 168
Query: 182 PYAADKRRGYHRQYFPRQGG 241
YAAD+RR Y R Y+ R+ G
Sbjct: 169 RYAADRRR-YRRGYYGRRRG 187
>BC015913-1|AAH15913.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 119 bits (286), Expect = 1e-26
Identities = 58/80 (72%), Positives = 64/80 (80%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGP G PV+GS
Sbjct: 109 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGS 168
Query: 182 PYAADKRRGYHRQYFPRQGG 241
YAAD+RR Y R Y+ R+ G
Sbjct: 169 RYAADRRR-YRRGYYGRRRG 187
>BC015564-1|AAH15564.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 119 bits (286), Expect = 1e-26
Identities = 58/80 (72%), Positives = 64/80 (80%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGP G PV+GS
Sbjct: 109 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGS 168
Query: 182 PYAADKRRGYHRQYFPRQGG 241
YAAD+RR Y R Y+ R+ G
Sbjct: 169 RYAADRRR-YRRGYYGRRRG 187
>BC008801-1|AAH08801.1| 372|Homo sapiens cold shock domain protein
A protein.
Length = 372
Score = 119 bits (286), Expect = 1e-26
Identities = 58/80 (72%), Positives = 64/80 (80%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGP G PV+GS
Sbjct: 109 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGS 168
Query: 182 PYAADKRRGYHRQYFPRQGG 241
YAAD+RR Y R Y+ R+ G
Sbjct: 169 RYAADRRR-YRRGYYGRRRG 187
>AB209896-1|BAD93133.1| 134|Homo sapiens CSDA protein variant
protein.
Length = 134
Score = 119 bits (286), Expect = 1e-26
Identities = 58/80 (72%), Positives = 64/80 (80%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGP G PV+GS
Sbjct: 42 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGS 101
Query: 182 PYAADKRRGYHRQYFPRQGG 241
YAAD+RR Y R Y+ R+ G
Sbjct: 102 RYAADRRR-YRRGYYGRRRG 120
>BC009744-1|AAH09744.1| 303|Homo sapiens CSDA protein protein.
Length = 303
Score = 118 bits (283), Expect = 3e-26
Identities = 57/80 (71%), Positives = 64/80 (80%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RS+GDGE VEF VV GEKG E A VTGP G PV+GS
Sbjct: 109 RNDTKEDVFVHQTAIKKNNPRKYLRSLGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGS 168
Query: 182 PYAADKRRGYHRQYFPRQGG 241
YAAD+RR Y R Y+ R+ G
Sbjct: 169 RYAADRRR-YRRGYYGRRRG 187
>M85234-1|AAA36569.1| 322|Homo sapiens nuclease sensitive element
binding protein-1 protein.
Length = 322
Score = 117 bits (282), Expect = 4e-26
Identities = 58/86 (67%), Positives = 67/86 (77%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGPGG PV+GS
Sbjct: 76 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGS 135
Query: 182 PYAADKRRGYHRQYFPRQGGGRGGEE 259
YAAD R ++R+Y R+G R ++
Sbjct: 136 KYAAD--RNHYRRYPRRRGPPRNYQQ 159
>M83234-1|AAA59949.1| 320|Homo sapiens DNA-binding protein protein.
Length = 320
Score = 117 bits (282), Expect = 4e-26
Identities = 58/86 (67%), Positives = 67/86 (77%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGPGG PV+GS
Sbjct: 74 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGS 133
Query: 182 PYAADKRRGYHRQYFPRQGGGRGGEE 259
YAAD R ++R+Y R+G R ++
Sbjct: 134 KYAAD--RNHYRRYPRRRGPPRNYQQ 157
>M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-binding
protein B (dbpB) gene, 3' end. ).
Length = 364
Score = 117 bits (282), Expect = 4e-26
Identities = 58/86 (67%), Positives = 67/86 (77%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGPGG PV+GS
Sbjct: 117 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGS 176
Query: 182 PYAADKRRGYHRQYFPRQGGGRGGEE 259
YAAD R ++R+Y R+G R ++
Sbjct: 177 KYAAD--RNHYRRYPRRRGPPRNYQQ 200
>L28809-1|AAA20871.1| 324|Homo sapiens protein ( Homo sapiens
dbpB-like protein mRNA, complete cds. ).
Length = 324
Score = 117 bits (282), Expect = 4e-26
Identities = 58/86 (67%), Positives = 67/86 (77%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGPGG PV+GS
Sbjct: 77 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGS 136
Query: 182 PYAADKRRGYHRQYFPRQGGGRGGEE 259
YAAD R ++R+Y R+G R ++
Sbjct: 137 KYAAD--RNHYRRYPRRRGPPRNYQQ 160
>BC106045-1|AAI06046.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 117 bits (282), Expect = 4e-26
Identities = 58/86 (67%), Positives = 67/86 (77%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGPGG PV+GS
Sbjct: 77 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGS 136
Query: 182 PYAADKRRGYHRQYFPRQGGGRGGEE 259
YAAD R ++R+Y R+G R ++
Sbjct: 137 KYAAD--RNHYRRYPRRRGPPRNYQQ 160
>BC098435-1|AAH98435.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 117 bits (282), Expect = 4e-26
Identities = 58/86 (67%), Positives = 67/86 (77%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGPGG PV+GS
Sbjct: 77 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGS 136
Query: 182 PYAADKRRGYHRQYFPRQGGGRGGEE 259
YAAD R ++R+Y R+G R ++
Sbjct: 137 KYAAD--RNHYRRYPRRRGPPRNYQQ 160
>BC090038-1|AAH90038.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 117 bits (282), Expect = 4e-26
Identities = 58/86 (67%), Positives = 67/86 (77%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGPGG PV+GS
Sbjct: 77 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGS 136
Query: 182 PYAADKRRGYHRQYFPRQGGGRGGEE 259
YAAD R ++R+Y R+G R ++
Sbjct: 137 KYAAD--RNHYRRYPRRRGPPRNYQQ 160
>BC072014-1|AAH72014.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 117 bits (282), Expect = 4e-26
Identities = 58/86 (67%), Positives = 67/86 (77%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGPGG PV+GS
Sbjct: 77 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGS 136
Query: 182 PYAADKRRGYHRQYFPRQGGGRGGEE 259
YAAD R ++R+Y R+G R ++
Sbjct: 137 KYAAD--RNHYRRYPRRRGPPRNYQQ 160
>BC071708-1|AAH71708.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 117 bits (282), Expect = 4e-26
Identities = 58/86 (67%), Positives = 67/86 (77%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGPGG PV+GS
Sbjct: 77 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGS 136
Query: 182 PYAADKRRGYHRQYFPRQGGGRGGEE 259
YAAD R ++R+Y R+G R ++
Sbjct: 137 KYAAD--RNHYRRYPRRRGPPRNYQQ 160
>BC070084-1|AAH70084.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 117 bits (282), Expect = 4e-26
Identities = 58/86 (67%), Positives = 67/86 (77%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGPGG PV+GS
Sbjct: 77 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGS 136
Query: 182 PYAADKRRGYHRQYFPRQGGGRGGEE 259
YAAD R ++R+Y R+G R ++
Sbjct: 137 KYAAD--RNHYRRYPRRRGPPRNYQQ 160
>BC065571-1|AAH65571.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 117 bits (282), Expect = 4e-26
Identities = 58/86 (67%), Positives = 67/86 (77%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGPGG PV+GS
Sbjct: 77 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGS 136
Query: 182 PYAADKRRGYHRQYFPRQGGGRGGEE 259
YAAD R ++R+Y R+G R ++
Sbjct: 137 KYAAD--RNHYRRYPRRRGPPRNYQQ 160
>BC038384-1|AAH38384.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 117 bits (282), Expect = 4e-26
Identities = 58/86 (67%), Positives = 67/86 (77%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGPGG PV+GS
Sbjct: 77 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGS 136
Query: 182 PYAADKRRGYHRQYFPRQGGGRGGEE 259
YAAD R ++R+Y R+G R ++
Sbjct: 137 KYAAD--RNHYRRYPRRRGPPRNYQQ 160
>BC018393-1|AAH18393.1| 267|Homo sapiens Unknown (protein for
IMAGE:3882730) protein.
Length = 267
Score = 117 bits (282), Expect = 4e-26
Identities = 58/86 (67%), Positives = 67/86 (77%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGPGG PV+GS
Sbjct: 77 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGS 136
Query: 182 PYAADKRRGYHRQYFPRQGGGRGGEE 259
YAAD R ++R+Y R+G R ++
Sbjct: 137 KYAAD--RNHYRRYPRRRGPPRNYQQ 160
>BC015208-1|AAH15208.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 117 bits (282), Expect = 4e-26
Identities = 58/86 (67%), Positives = 67/86 (77%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGPGG PV+GS
Sbjct: 77 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGS 136
Query: 182 PYAADKRRGYHRQYFPRQGGGRGGEE 259
YAAD R ++R+Y R+G R ++
Sbjct: 137 KYAAD--RNHYRRYPRRRGPPRNYQQ 160
>BC010430-1|AAH10430.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 117 bits (282), Expect = 4e-26
Identities = 58/86 (67%), Positives = 67/86 (77%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGPGG PV+GS
Sbjct: 77 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGS 136
Query: 182 PYAADKRRGYHRQYFPRQGGGRGGEE 259
YAAD R ++R+Y R+G R ++
Sbjct: 137 KYAAD--RNHYRRYPRRRGPPRNYQQ 160
>BC002411-1|AAH02411.1| 324|Homo sapiens Y box binding protein 1
protein.
Length = 324
Score = 117 bits (282), Expect = 4e-26
Identities = 58/86 (67%), Positives = 67/86 (77%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGPGG PV+GS
Sbjct: 77 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGS 136
Query: 182 PYAADKRRGYHRQYFPRQGGGRGGEE 259
YAAD R ++R+Y R+G R ++
Sbjct: 137 KYAAD--RNHYRRYPRRRGPPRNYQQ 160
>BC000064-1|AAH00064.1| 266|Homo sapiens YBX1 protein protein.
Length = 266
Score = 117 bits (282), Expect = 4e-26
Identities = 58/86 (67%), Positives = 67/86 (77%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGPGG PV+GS
Sbjct: 77 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVPVQGS 136
Query: 182 PYAADKRRGYHRQYFPRQGGGRGGEE 259
YAAD R ++R+Y R+G R ++
Sbjct: 137 KYAAD--RNHYRRYPRRRGPPRNYQQ 160
>J03827-1|AAA61308.1| 317|Homo sapiens NFYA protein.
Length = 317
Score = 117 bits (281), Expect = 5e-26
Identities = 58/86 (67%), Positives = 67/86 (77%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI +NNPRK +RSVGDGE VEF VV GEKG E A VTGPGG PV+GS
Sbjct: 77 RNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGEEAANVTGPGGVPVQGS 136
Query: 182 PYAADKRRGYHRQYFPRQGGGRGGEE 259
YAAD R ++R+Y R+G R ++
Sbjct: 137 KYAAD--RNHYRRYPRRRGPPRNYQQ 160
>BC047760-1|AAH47760.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 114 bits (274), Expect = 3e-25
Identities = 55/77 (71%), Positives = 61/77 (79%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF VV GEKG E VTGPGG PVKGS
Sbjct: 112 RNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGS 171
Query: 182 PYAADKRRGYHRQYFPR 232
YA ++R+ R++ PR
Sbjct: 172 RYAPNRRKS--RRFIPR 186
>BC033800-1|AAH33800.1| 364|Homo sapiens Y box binding protein 2
protein.
Length = 364
Score = 114 bits (274), Expect = 3e-25
Identities = 55/77 (71%), Positives = 61/77 (79%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF VV GEKG E VTGPGG PVKGS
Sbjct: 112 RNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGS 171
Query: 182 PYAADKRRGYHRQYFPR 232
YA ++R+ R++ PR
Sbjct: 172 RYAPNRRKS--RRFIPR 186
>AF096834-1|AAD30662.1| 364|Homo sapiens germ cell specific Y-box
binding protein protein.
Length = 364
Score = 114 bits (274), Expect = 3e-25
Identities = 55/77 (71%), Positives = 61/77 (79%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVHQTAI RNNPRK +RSVGDGE VEF VV GEKG E VTGPGG PVKGS
Sbjct: 112 RNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGS 171
Query: 182 PYAADKRRGYHRQYFPR 232
YA ++R+ R++ PR
Sbjct: 172 RYAPNRRKS--RRFIPR 186
>DQ120685-1|ABB92460.1| 319|Homo sapiens rcNSEP1 protein.
Length = 319
Score = 109 bits (263), Expect = 7e-24
Identities = 55/80 (68%), Positives = 62/80 (77%)
Frame = +2
Query: 2 RNDTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGS 181
RNDTKEDVFVH TA +NNPRK +RSVGDGE VEF VV GEKG + A VTGPGG PV+GS
Sbjct: 73 RNDTKEDVFVHHTAXKKNNPRKYLRSVGDGEXVEFDVVEGEKGAKAANVTGPGGVPVQGS 132
Query: 182 PYAADKRRGYHRQYFPRQGG 241
YAAD R ++R+Y PR G
Sbjct: 133 KYAAD--RNHYRRY-PRPRG 149
>AB208818-1|BAD92055.1| 268|Homo sapiens germ cell specific Y-box
binding protein variant protein.
Length = 268
Score = 92.7 bits (220), Expect = 1e-18
Identities = 45/70 (64%), Positives = 53/70 (75%)
Frame = +2
Query: 23 VFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGSPYAADKR 202
+F +QTAI RNNPRK +RSVGDGE VEF VV GEKG E VTGPGG PVKGS YA ++R
Sbjct: 23 LFPNQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNVTGPGGVPVKGSRYAPNRR 82
Query: 203 RGYHRQYFPR 232
+ R++ PR
Sbjct: 83 KS--RRFIPR 90
>Z95329-1|CAI21661.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 48.4 bits (110), Expect = 3e-05
Identities = 35/100 (35%), Positives = 47/100 (47%)
Frame = +2
Query: 8 DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGSPY 187
D DVFVHQ+ + + RS+ +GE VEF KG E VTGPGG P GS
Sbjct: 57 DIPVDVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGSER 112
Query: 188 AADKRRGYHRQYFPRQGGGRGGEELHAEED*DVVDPRPTK 307
+ R+ + GG + HA+E + P+P K
Sbjct: 113 RPKGKTLQKRKPKGDRCYNCGGLDHHAKE--CSLPPQPKK 150
>DQ127228-1|AAZ38897.1| 250|Homo sapiens LIN28B protein.
Length = 250
Score = 48.4 bits (110), Expect = 3e-05
Identities = 35/100 (35%), Positives = 47/100 (47%)
Frame = +2
Query: 8 DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGSPY 187
D DVFVHQ+ + + RS+ +GE VEF KG E VTGPGG P GS
Sbjct: 57 DIPVDVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGSER 112
Query: 188 AADKRRGYHRQYFPRQGGGRGGEELHAEED*DVVDPRPTK 307
+ R+ + GG + HA+E + P+P K
Sbjct: 113 RPKGKTLQKRKPKGDRCYNCGGLDHHAKE--CSLPPQPKK 150
>BC150538-1|AAI50539.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127315) protein.
Length = 227
Score = 48.4 bits (110), Expect = 3e-05
Identities = 35/100 (35%), Positives = 47/100 (47%)
Frame = +2
Query: 8 DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGSPY 187
D DVFVHQ+ + + RS+ +GE VEF KG E VTGPGG P GS
Sbjct: 34 DIPVDVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGSER 89
Query: 188 AADKRRGYHRQYFPRQGGGRGGEELHAEED*DVVDPRPTK 307
+ R+ + GG + HA+E + P+P K
Sbjct: 90 RPKGKTLQKRKPKGDRCYNCGGLDHHAKE--CSLPPQPKK 127
>BC150537-1|AAI50538.1| 227|Homo sapiens Unknown (protein for
IMAGE:40127314) protein.
Length = 227
Score = 48.4 bits (110), Expect = 3e-05
Identities = 35/100 (35%), Positives = 47/100 (47%)
Frame = +2
Query: 8 DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGSPY 187
D DVFVHQ+ + + RS+ +GE VEF KG E VTGPGG P GS
Sbjct: 34 DIPVDVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGSER 89
Query: 188 AADKRRGYHRQYFPRQGGGRGGEELHAEED*DVVDPRPTK 307
+ R+ + GG + HA+E + P+P K
Sbjct: 90 RPKGKTLQKRKPKGDRCYNCGGLDHHAKE--CSLPPQPKK 127
>BC141960-1|AAI41961.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 48.4 bits (110), Expect = 3e-05
Identities = 35/100 (35%), Positives = 47/100 (47%)
Frame = +2
Query: 8 DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGSPY 187
D DVFVHQ+ + + RS+ +GE VEF KG E VTGPGG P GS
Sbjct: 34 DIPVDVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGSER 89
Query: 188 AADKRRGYHRQYFPRQGGGRGGEELHAEED*DVVDPRPTK 307
+ R+ + GG + HA+E + P+P K
Sbjct: 90 RPKGKTLQKRKPKGDRCYNCGGLDHHAKE--CSLPPQPKK 127
>BC127713-1|AAI27714.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 48.4 bits (110), Expect = 3e-05
Identities = 35/100 (35%), Positives = 47/100 (47%)
Frame = +2
Query: 8 DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGSPY 187
D DVFVHQ+ + + RS+ +GE VEF KG E VTGPGG P GS
Sbjct: 34 DIPVDVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGSER 89
Query: 188 AADKRRGYHRQYFPRQGGGRGGEELHAEED*DVVDPRPTK 307
+ R+ + GG + HA+E + P+P K
Sbjct: 90 RPKGKTLQKRKPKGDRCYNCGGLDHHAKE--CSLPPQPKK 127
>BC127712-1|AAI27713.1| 227|Homo sapiens LIN28B protein protein.
Length = 227
Score = 48.4 bits (110), Expect = 3e-05
Identities = 35/100 (35%), Positives = 47/100 (47%)
Frame = +2
Query: 8 DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGSPY 187
D DVFVHQ+ + + RS+ +GE VEF KG E VTGPGG P GS
Sbjct: 34 DIPVDVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGSER 89
Query: 188 AADKRRGYHRQYFPRQGGGRGGEELHAEED*DVVDPRPTK 307
+ R+ + GG + HA+E + P+P K
Sbjct: 90 RPKGKTLQKRKPKGDRCYNCGGLDHHAKE--CSLPPQPKK 127
>AL135911-2|CAI20969.2| 250|Homo sapiens lin-28 homolog B (C.
elegans) protein.
Length = 250
Score = 48.4 bits (110), Expect = 3e-05
Identities = 35/100 (35%), Positives = 47/100 (47%)
Frame = +2
Query: 8 DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGSPY 187
D DVFVHQ+ + + RS+ +GE VEF KG E VTGPGG P GS
Sbjct: 57 DIPVDVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGSER 112
Query: 188 AADKRRGYHRQYFPRQGGGRGGEELHAEED*DVVDPRPTK 307
+ R+ + GG + HA+E + P+P K
Sbjct: 113 RPKGKTLQKRKPKGDRCYNCGGLDHHAKE--CSLPPQPKK 150
>AK131411-1|BAD18558.1| 250|Homo sapiens protein ( Homo sapiens
cDNA FLJ16517 fis, clone NT2RI3007167. ).
Length = 250
Score = 48.4 bits (110), Expect = 3e-05
Identities = 35/100 (35%), Positives = 47/100 (47%)
Frame = +2
Query: 8 DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGSPY 187
D DVFVHQ+ + + RS+ +GE VEF KG E VTGPGG P GS
Sbjct: 57 DIPVDVFVHQSKLFM----EGFRSLKEGEPVEFTFKKSSKGLESIRVTGPGGSPCLGSER 112
Query: 188 AADKRRGYHRQYFPRQGGGRGGEELHAEED*DVVDPRPTK 307
+ R+ + GG + HA+E + P+P K
Sbjct: 113 RPKGKTLQKRKPKGDRCYNCGGLDHHAKE--CSLPPQPKK 150
>BC028566-1|AAH28566.1| 209|Homo sapiens LIN28 protein protein.
Length = 209
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/100 (35%), Positives = 47/100 (47%)
Frame = +2
Query: 8 DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGSPY 187
D DVFVHQ+ + + RS+ +GEAVEF KG E VTGPGG GS
Sbjct: 67 DPPVDVFVHQSKLHM----EGFRSLKEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSER 122
Query: 188 AADKRRGYHRQYFPRQGGGRGGEELHAEED*DVVDPRPTK 307
+ R+ + GG + HA+E + P+P K
Sbjct: 123 RPKGKSMQKRRSKGDRCYNCGGLDHHAKE--CKLPPQPKK 160
>AL513365-12|CAI21500.1| 209|Homo sapiens lin-28 homolog (C.
elegans) protein.
Length = 209
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/100 (35%), Positives = 47/100 (47%)
Frame = +2
Query: 8 DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGSPY 187
D DVFVHQ+ + + RS+ +GEAVEF KG E VTGPGG GS
Sbjct: 67 DPPVDVFVHQSKLHM----EGFRSLKEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSER 122
Query: 188 AADKRRGYHRQYFPRQGGGRGGEELHAEED*DVVDPRPTK 307
+ R+ + GG + HA+E + P+P K
Sbjct: 123 RPKGKSMQKRRSKGDRCYNCGGLDHHAKE--CKLPPQPKK 160
>AK022519-1|BAB14075.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ12457 fis, clone NT2RM1000666, weakly similar to
DNA-BINDING PROTEIN A. ).
Length = 209
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/100 (35%), Positives = 47/100 (47%)
Frame = +2
Query: 8 DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGSPY 187
D DVFVHQ+ + + RS+ +GEAVEF KG E VTGPGG GS
Sbjct: 67 DPPVDVFVHQSKLHM----EGFRSLKEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSER 122
Query: 188 AADKRRGYHRQYFPRQGGGRGGEELHAEED*DVVDPRPTK 307
+ R+ + GG + HA+E + P+P K
Sbjct: 123 RPKGKSMQKRRSKGDRCYNCGGLDHHAKE--CKLPPQPKK 160
>AF521099-1|AAM77751.1| 209|Homo sapiens RNA-binding protein LIN-28
protein.
Length = 209
Score = 45.2 bits (102), Expect = 2e-04
Identities = 35/100 (35%), Positives = 47/100 (47%)
Frame = +2
Query: 8 DTKEDVFVHQTAIARNNPRKAVRSVGDGEAVEFAVVAGEKGFEXAGVTGPGGEPVKGSPY 187
D DVFVHQ+ + + RS+ +GEAVEF KG E VTGPGG GS
Sbjct: 67 DPPVDVFVHQSKLHM----EGFRSLKEGEAVEFTFKKSAKGLESIRVTGPGGVFCIGSER 122
Query: 188 AADKRRGYHRQYFPRQGGGRGGEELHAEED*DVVDPRPTK 307
+ R+ + GG + HA+E + P+P K
Sbjct: 123 RPKGKSMQKRRSKGDRCYNCGGLDHHAKE--CKLPPQPKK 160
>BC009737-1|AAH09737.1| 404|Homo sapiens ubiquitin-activating
enzyme E1-domain containing 1 protein.
Length = 404
Score = 32.3 bits (70), Expect = 1.8
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +2
Query: 227 PRQGGGRGGEELHAEED*DVVDPRPTKGVHKEMRVKKEALYHLSAVFSVAIFAVDAVGEV 406
PR G G GG + +VVD P + R+ + Y F+VAI V VG V
Sbjct: 28 PRSGDGGGGRVRIEKMSSEVVDSNPYSRLMALKRMGIVSDYEKIRTFAVAIVGVGGVGSV 87
Query: 407 LAQ 415
A+
Sbjct: 88 TAE 90
>AY253672-1|AAP79600.1| 404|Homo sapiens ThiFP1 protein.
Length = 404
Score = 32.3 bits (70), Expect = 1.8
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +2
Query: 227 PRQGGGRGGEELHAEED*DVVDPRPTKGVHKEMRVKKEALYHLSAVFSVAIFAVDAVGEV 406
PR G G GG + +VVD P + R+ + Y F+VAI V VG V
Sbjct: 28 PRSGDGGGGRVRIEKMSSEVVDSNPYSRLMALKRMGIVSDYEKIRTFAVAIVGVGGVGSV 87
Query: 407 LAQ 415
A+
Sbjct: 88 TAE 90
>AL136757-1|CAB66691.1| 404|Homo sapiens hypothetical protein
protein.
Length = 404
Score = 32.3 bits (70), Expect = 1.8
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +2
Query: 227 PRQGGGRGGEELHAEED*DVVDPRPTKGVHKEMRVKKEALYHLSAVFSVAIFAVDAVGEV 406
PR G G GG + +VVD P + R+ + Y F+VAI V VG V
Sbjct: 28 PRSGDGGGGRVRIEKMSSEVVDSNPYSRLMALKRMGIVSDYEKIRTFAVAIVGVGGVGSV 87
Query: 407 LAQ 415
A+
Sbjct: 88 TAE 90
>AK026904-1|BAB15587.1| 404|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23251 fis, clone COL04590. ).
Length = 404
Score = 32.3 bits (70), Expect = 1.8
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +2
Query: 227 PRQGGGRGGEELHAEED*DVVDPRPTKGVHKEMRVKKEALYHLSAVFSVAIFAVDAVGEV 406
PR G G GG + +VVD P + R+ + Y F+VAI V VG V
Sbjct: 28 PRSGDGGGGRVRIEKMSSEVVDSNPYSRLMALKRMGIVSDYEKIRTFAVAIVGVGGVGSV 87
Query: 407 LAQ 415
A+
Sbjct: 88 TAE 90
>AB154406-1|BAD15375.1| 404|Homo sapiens Ubiquitin activating
enzyme protein.
Length = 404
Score = 32.3 bits (70), Expect = 1.8
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +2
Query: 227 PRQGGGRGGEELHAEED*DVVDPRPTKGVHKEMRVKKEALYHLSAVFSVAIFAVDAVGEV 406
PR G G GG + +VVD P + R+ + Y F+VAI V VG V
Sbjct: 28 PRSGDGGGGRVRIEKMSSEVVDSNPYSRLMALKRMGIVSDYEKIRTFAVAIVGVGGVGSV 87
Query: 407 LAQ 415
A+
Sbjct: 88 TAE 90
>DQ323928-1|ABC54712.1| 410|Homo sapiens Spred3 protein.
Length = 410
Score = 31.9 bits (69), Expect = 2.3
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +2
Query: 152 GPGGEPVKGSPYAADKRRGYH-RQYFPRQGGGRGG 253
GP P K SP A + R H R F R+ GRGG
Sbjct: 279 GPSSAPAKASPEAEEAARCVHCRALFRRRADGRGG 313
>AB002367-1|BAA20824.2| 794|Homo sapiens KIAA0369 protein.
Length = 794
Score = 31.5 bits (68), Expect = 3.1
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 408 WPNE*RRVPSSASAQ-FPAGAGRTKSGSAPKWPG*DASATTSNQQQGAK 551
WP RR P++A+AQ PA A + S +AP P +A Q+G K
Sbjct: 1 WPQPRRRAPAAAAAQPGPAAAPQPCSPAAPAAPSPARTAPGGGPQRGHK 49
>Z74615-1|CAA98968.1| 1464|Homo sapiens prepro-alpha1(I) collagen
protein.
Length = 1464
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 119 GEKGFEXAGVTGPGGEPVKGSPYAADKRRG 208
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>X98705-1|CAA67261.1| 1069|Homo sapiens collagen type I alpha 1
protein.
Length = 1069
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 119 GEKGFEXAGVTGPGGEPVKGSPYAADKRRG 208
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>K01228-1|AAA51995.1| 1040|Homo sapiens COL1A1 protein.
Length = 1040
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 119 GEKGFEXAGVTGPGGEPVKGSPYAADKRRG 208
GE+GF G+ GP GEP K P A RG
Sbjct: 544 GERGFP--GLPGPSGEPGKQGPSGASGERG 571
>BC036531-1|AAH36531.1| 1464|Homo sapiens collagen, type I, alpha 1
protein.
Length = 1464
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 119 GEKGFEXAGVTGPGGEPVKGSPYAADKRRG 208
GE+GF G+ GP GEP K P A RG
Sbjct: 968 GERGFP--GLPGPSGEPGKQGPSGASGERG 995
>AF017178-1|AAB94054.2| 1461|Homo sapiens pro alpha 1(I) collagen
protein.
Length = 1461
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 119 GEKGFEXAGVTGPGGEPVKGSPYAADKRRG 208
GE+GF G+ GP GEP K P A RG
Sbjct: 965 GERGFP--GLPGPSGEPGKQGPSGASGERG 992
>AB209597-1|BAD92834.1| 1467|Homo sapiens Collagen alpha 1 chain
precursor variant protein.
Length = 1467
Score = 30.7 bits (66), Expect = 5.4
Identities = 15/30 (50%), Positives = 17/30 (56%)
Frame = +2
Query: 119 GEKGFEXAGVTGPGGEPVKGSPYAADKRRG 208
GE+GF G+ GP GEP K P A RG
Sbjct: 971 GERGFP--GLPGPSGEPGKQGPSGASGERG 998
>BC000527-1|AAH00527.1| 354|Homo sapiens EWSR1 protein protein.
Length = 354
Score = 29.9 bits (64), Expect = 9.4
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Frame = +2
Query: 119 GEKGFEXAGVTGPG-GEPVKGSPYAADKRRGYHRQYFPR--QGGGRGGEELHAE 271
G G E G +GPG + G R G+ R R +GGGRGG L +E
Sbjct: 276 GVYGQESGGFSGPGENRSMSGPDNRGRGRGGFDRGGMSRGGRGGGRGGMGLQSE 329
>AK125874-1|BAC86330.1| 243|Homo sapiens protein ( Homo sapiens
cDNA FLJ43886 fis, clone TESTI4009283. ).
Length = 243
Score = 29.9 bits (64), Expect = 9.4
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 149 TGPGGEPVKGSPYAADKRRGYHRQYFPRQGGGRGGEELHAEE 274
T G P +G+P+ D+ G R PR+GG E LH +
Sbjct: 99 TSQTGRPGRGAPHLPDRVAGQRRSSPPRRGG--RAEALHTSQ 138
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,221,289
Number of Sequences: 237096
Number of extensions: 2164401
Number of successful extensions: 6874
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 6321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6870
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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