Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= pg--0903.Seq
         (664 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein p...    25   2.8  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   4.9  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    23   6.5  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   8.6  

>AB090821-1|BAC57917.1|  353|Anopheles gambiae gag-like protein
           protein.
          Length = 353

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 13/31 (41%), Positives = 14/31 (45%)
 Frame = -2

Query: 519 SFSPLERIRKRSNKSSECGNKLN*ITRKHRP 427
           S SPL  I   S  SS C N  +  T   RP
Sbjct: 37  SGSPLSSISSSSRNSSSCNNSSSSGTHSDRP 67


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +1

Query: 541 LYNWTLSKQKLRDCRVLCGNRVTVCLFDCDGTVSGC 648
           + +W  S    R CRV  G+ ++   F   G   GC
Sbjct: 641 IISWLSSYLSNRSCRVKTGSYLSEEFFCTSGVPQGC 676


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 23.4 bits (48), Expect = 6.5
 Identities = 7/11 (63%), Positives = 11/11 (100%)
 Frame = +3

Query: 456 ICFHILNFCLI 488
           ICF+ILN+C++
Sbjct: 541 ICFNILNWCML 551


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.0 bits (47), Expect = 8.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -2

Query: 339 GTVREVRLVTAATGSMGPADGALLLSPSRN 250
           GT+RE  L      ++ PA+  L++S  R+
Sbjct: 761 GTIRERELQNINNNNLTPAERELIMSVQRH 790


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,209
Number of Sequences: 2352
Number of extensions: 13716
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66068490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)