BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= pg--0902X.Seq
(548 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ... 24 2.9
AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. 24 3.8
>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
protein.
Length = 1087
Score = 24.2 bits (50), Expect = 2.9
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = +2
Query: 281 RQPRTF--RQIQQILLEVFKACSTN---AADRPLEAQAHYIIV*TDRFKQFRAAVRGDXG 445
+QP + + + LL++FK CST+ A R + + I T+ + A +RG G
Sbjct: 185 KQPELYEGQNLSNQLLDIFKQCSTDDYAVAGRFVSEAVNEIFTDTETESEGFAIIRGIFG 244
>AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein.
Length = 679
Score = 23.8 bits (49), Expect = 3.8
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -3
Query: 507 CSTTVTASTKACTKSCPKWASPXSPLTAARN 415
CS TAS+ +C+ S P SP + N
Sbjct: 238 CSPLSTASSASCSSSAAGSLCPTSPPASVSN 268
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 592,476
Number of Sequences: 2352
Number of extensions: 12744
Number of successful extensions: 39
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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